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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33933
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:77729:79198:-1 gene:CAA33933 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl16 description:ribosomal protein L16
Sequence

ATGCTTAGTCCCAAAAGAACCAGATTTCGTAAACAACATAGAGGAAGAATGAAGGGAAAA
TCCTACCGAGGCAATTGTATTTGTTTTGGTAGATATGCTCTTCAAGCACTTGAACCCACT
TGGATTACGGCGAGGCAGATAGAAGCAGGACGAAGAGCAATGACACGATATGCACGTCGT
GGTGGAAAAATCTGGGTACGTATATTTCCCGACAAACCGGTTACAATAAGACCGACCGAA
ACACGTATGGGTTCGGGAAAGGGATCCCCCGAATATTGGGTAGCCGTTGTTAAACCAGGT
CGAATACTTTATGAAATGGGCGGAGTATCCGAAACTGTAGCTAGACGAGCTATTTCCATA
GCTGCCAGCAAAATGCCCATACGAAGTCAATTTCTTCGGTTAGAAATATAA

Peptide Sequence

PEP ID

CAA33933
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:77729:79198:-1 gene:CAA33933 transcript:CAA33933 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl16 description:ribosomal protein L16
Sequence

MLSPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALEPTWITARQIEAGRRAMTRYARR
GGKIWVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVSETVARRAISI
AASKMPIRSQFLRLEI

Transcript Sequence

Transcript ID

CAA33933
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:77729:79198:-1 gene:CAA33933 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl16 description:ribosomal protein L16
Sequence

ATGCTTAGTCCCAAAAGAACCAGATTTCGTAAACAACATAGAGGAAGAATGAAGGGAAAA
TCCTACCGAGGCAATTGTATTTGTTTTGGTAGATATGCTCTTCAAGCACTTGAACCCACT
TGGATTACGGCGAGGCAGATAGAAGCAGGACGAAGAGCAATGACACGATATGCACGTCGT
GGTGGAAAAATCTGGGTACGTATATTTCCCGACAAACCGGTTACAATAAGACCGACCGAA
ACACGTATGGGTTCGGGAAAGGGATCCCCCGAATATTGGGTAGCCGTTGTTAAACCAGGT
CGAATACTTTATGAAATGGGCGGAGTATCCGAAACTGTAGCTAGACGAGCTATTTCCATA
GCTGCCAGCAAAATGCCCATACGAAGTCAATTTCTTCGGTTAGAAATATAA