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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33930
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:76238:76561:-1 gene:CAA33930 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:infA description:initiation factor 1
Sequence

ATGACAGAAAAGAAAAATAGGAGAGAAAAAAAAAACCCGAGAGAAGCAAAAATTACTTTC
GAGGGTTTAGTTATGGAAGCCCTACCCAACGGAATGTTCCGCGTTCGCCTAGAGAATGAC
ACCATCATCCTGGGCTATATTTCAGGAAAGATCCGGTCTAGTTCTATACGAATACTGATG
GGGGATAGGGTCAAAATTGAAGTAAGTCGTTATGATTCAAGCAAGGGGCGTATAATTTAT
AGACTTCCCCATAAGGATTCGAAGCGTACCGAAGACTCGAAGGATACCGAAGATTTGAAG
GATACCAAAGATTCAAAGGGTTAG

Peptide Sequence

PEP ID

CAA33930
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:76238:76561:-1 gene:CAA33930 transcript:CAA33930 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:infA description:initiation factor 1
Sequence

MTEKKNRREKKNPREAKITFEGLVMEALPNGMFRVRLENDTIILGYISGKIRSSSIRILM
GDRVKIEVSRYDSSKGRIIYRLPHKDSKRTEDSKDTEDLKDTKDSKG

Transcript Sequence

Transcript ID

CAA33930
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:76238:76561:-1 gene:CAA33930 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:infA description:initiation factor 1
Sequence

ATGACAGAAAAGAAAAATAGGAGAGAAAAAAAAAACCCGAGAGAAGCAAAAATTACTTTC
GAGGGTTTAGTTATGGAAGCCCTACCCAACGGAATGTTCCGCGTTCGCCTAGAGAATGAC
ACCATCATCCTGGGCTATATTTCAGGAAAGATCCGGTCTAGTTCTATACGAATACTGATG
GGGGATAGGGTCAAAATTGAAGTAAGTCGTTATGATTCAAGCAAGGGGCGTATAATTTAT
AGACTTCCCCATAAGGATTCGAAGCGTACCGAAGACTCGAAGGATACCGAAGATTTGAAG
GATACCAAAGATTCAAAGGGTTAG