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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33928
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:132454:133938:1 gene:CAA33928 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl2 description:ribosomal protein L2
Sequence

ACGGCGAAACATTTATACAAAACACCTATCCCGAGCACACGCAAGGGAACCATAGATAGG
CAAGTGAAATCCAATCCACGAAATAATTTGATCCATGGACGGCACCGTTGTGGTAAAGGT
CGTAATTCCAGAGGAATCATTACCGCAAGGCATAGAGGGGGAGGTCATAAGCGCCTATAC
CGTAAAATCGATTTTCGACGGAATCAAAAAGACATATCTGGTAGAATCGTAACCATAGAA
TACGACCCTAATCGAAATGCGTACATTTGTCTCATACACTATGGGGATGGTGAGAAGGGA
TATATTTTACATCCCAGAGGGGCTATAATTGGAGATACTATTGTTTCTGGTACAAAAGTT
CCTATATCAATGGGAAATGCCCTACCTTTGACCGATATGCCCTTAGGCACGGCCATACAT
AACATAGAAATCACACGTGGAAGGGGTGGGCAATTAGCTAGAGCAGCAGGTGCTGTAGCG
AAACTGATTGCAAAAGAAGGTAAATCGGCCACTTTAAGATTACCATCTGGGGAGGTCCGT
TTGGTATCCCAAAACTGCTTAGCAACAGTCGGACAAGTGGGTAATGTTGGGGTGAACCAA
AAAAGTTTGGGTAGAGCCGGGTCTAAGTGTTGGCTAGGTAAACGCCCCGTAGTAAGAGGG
GTAGTTATGAACCCTGTGGACCACCCCCATGGGGGCGGTGAAGGGAAAGCCCCCATTGGT
AGAAAAAAACCCACAACCCCTTGGGGTTATCCTGCGCTTGGAAGAAGAACTAGGAAAAGG
AAAAAATATAGTGATAGTTTTATTCTTCGTCGCCGTAAGTAA

Peptide Sequence

PEP ID

CAA33928
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:132454:133938:1 gene:CAA33928 transcript:CAA33928 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl2 description:ribosomal protein L2
Sequence

TAKHLYKTPIPSTRKGTIDRQVKSNPRNNLIHGRHRCGKGRNSRGIITARHRGGGHKRLY
RKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDGEKGYILHPRGAIIGDTIVSGTKV
PISMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVR
LVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGKAPIG
RKKPTTPWGYPALGRRTRKRKKYSDSFILRRRK

Transcript Sequence

Transcript ID

CAA33928
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:132454:133938:1 gene:CAA33928 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl2 description:ribosomal protein L2
Sequence

ACGGCGAAACATTTATACAAAACACCTATCCCGAGCACACGCAAGGGAACCATAGATAGG
CAAGTGAAATCCAATCCACGAAATAATTTGATCCATGGACGGCACCGTTGTGGTAAAGGT
CGTAATTCCAGAGGAATCATTACCGCAAGGCATAGAGGGGGAGGTCATAAGCGCCTATAC
CGTAAAATCGATTTTCGACGGAATCAAAAAGACATATCTGGTAGAATCGTAACCATAGAA
TACGACCCTAATCGAAATGCGTACATTTGTCTCATACACTATGGGGATGGTGAGAAGGGA
TATATTTTACATCCCAGAGGGGCTATAATTGGAGATACTATTGTTTCTGGTACAAAAGTT
CCTATATCAATGGGAAATGCCCTACCTTTGACCGATATGCCCTTAGGCACGGCCATACAT
AACATAGAAATCACACGTGGAAGGGGTGGGCAATTAGCTAGAGCAGCAGGTGCTGTAGCG
AAACTGATTGCAAAAGAAGGTAAATCGGCCACTTTAAGATTACCATCTGGGGAGGTCCGT
TTGGTATCCCAAAACTGCTTAGCAACAGTCGGACAAGTGGGTAATGTTGGGGTGAACCAA
AAAAGTTTGGGTAGAGCCGGGTCTAAGTGTTGGCTAGGTAAACGCCCCGTAGTAAGAGGG
GTAGTTATGAACCCTGTGGACCACCCCCATGGGGGCGGTGAAGGGAAAGCCCCCATTGGT
AGAAAAAAACCCACAACCCCTTGGGGTTATCCTGCGCTTGGAAGAAGAACTAGGAAAAGG
AAAAAATATAGTGATAGTTTTATTCTTCGTCGCCGTAAGTAA