Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

BAC19898
CDS Infomation

cds chromosome:IRGSP-1.0:Mt:342899:343465:-1 gene:BAC19898 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl5 description:Ribosomal protein L5
Sequence

ATGTTTCCACTCCATTTTCATTACGAAGATGTATTACGTCAGGATCTGTTGCTCAAACTG
AATCACGCCAATGTTATGGAAGTTCCTGGATTGTTTGAAATCAGATTAGTACCAAAAGCT
GCCTCTGATTTTAAAATCCAATTTGGAAAATTGGCTATGGAGATTTTGTGCGGTCAGAGA
TTCATACAGACACAAAGGGGCCCTTATTTTAAAGCAGGAAAGTCGTTTCGATCCAATCCA
TTCTTGGGGTCCGAAAAAGACACTGGATATGTCAGTGACTTTGCACGACAAAGCGTTCTC
CGAGGGCATGGAATGTACCATTTTTTGGTCAGAATCTTGACAGTAATGTCTATGTTAGAT
TCTCCGGTCGAAATATGGGAAAACTCCATCAAATTCTTTATGGAAACGGAGTTTTGCGAA
TTCTCCCCGGAACTGGAAGATCATTTCGAGATCTTCGAGCATATTCGAGGGTTCAATGTG
ACTATTGTCACTTCGGCCAATACAAAAGATGAGACTTTACTACTGTGGAGCGGCTTTTTG
CTAAAAGATGAGGGGGAAACTAAGTAA

Peptide Sequence

PEP ID

BAC19898
PEP Infomation

pep chromosome:IRGSP-1.0:Mt:342899:343465:-1 gene:BAC19898 transcript:BAC19898 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl5 description:Ribosomal protein L5
Sequence

MFPLHFHYEDVLRQDLLLKLNHANVMEVPGLFEIRLVPKAASDFKIQFGKLAMEILCGQR
FIQTQRGPYFKAGKSFRSNPFLGSEKDTGYVSDFARQSVLRGHGMYHFLVRILTVMSMLD
SPVEIWENSIKFFMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTKDETLLLWSGFL
LKDEGETK

Transcript Sequence

Transcript ID

BAC19898
Transcript Infomation

cdna chromosome:IRGSP-1.0:Mt:342899:343465:-1 gene:BAC19898 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl5 description:Ribosomal protein L5
Sequence

ATGTTTCCACTCCATTTTCATTACGAAGATGTATTACGTCAGGATCTGTTGCTCAAACTG
AATCACGCCAATGTTATGGAAGTTCCTGGATTGTTTGAAATCAGATTAGTACCAAAAGCT
GCCTCTGATTTTAAAATCCAATTTGGAAAATTGGCTATGGAGATTTTGTGCGGTCAGAGA
TTCATACAGACACAAAGGGGCCCTTATTTTAAAGCAGGAAAGTCGTTTCGATCCAATCCA
TTCTTGGGGTCCGAAAAAGACACTGGATATGTCAGTGACTTTGCACGACAAAGCGTTCTC
CGAGGGCATGGAATGTACCATTTTTTGGTCAGAATCTTGACAGTAATGTCTATGTTAGAT
TCTCCGGTCGAAATATGGGAAAACTCCATCAAATTCTTTATGGAAACGGAGTTTTGCGAA
TTCTCCCCGGAACTGGAAGATCATTTCGAGATCTTCGAGCATATTCGAGGGTTCAATGTG
ACTATTGTCACTTCGGCCAATACAAAAGATGAGACTTTACTACTGTGGAGCGGCTTTTTG
CTAAAAGATGAGGGGGAAACTAAGTAA