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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

BAC19892
CDS Infomation

cds chromosome:IRGSP-1.0:Mt:321368:321886:-1 gene:BAC19892 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps1 description:Ribosomal protein S1
Sequence

ATGTTCTTGGTGGATGCAGGCCTTGGTACCCCCAAAATTTGTATGCAAGATGAGCTTACA
GGACTGCCAATCAAGCGAGCCACCAGGTTTGAGAATAAGGTGGGATCCAAGAATGTAGTG
GCTGGTGAATCACTGATCAAAAAGCGGATTGAAGAGAGATTCTTCATCGATCTAGTGGCC
GGTGAATCACTGATCAAAGAGCGAGCAGCCGCCAGGTTTAATGATTTTGTGGGATCCCTG
GATGTAGCGGCTGGCGAACCGCTTCTTCTTCCACAAAGATTCAGACAAAACCGAGCTTGG
ATAGAACTGAAGAAGATTTGGCAAACGAAGAAAAAGGTCAAAGGGTTTCGTATTAAAAAA
ATCAAAGGAGGTTATTCAGTAGCCATCGCAGGTTTCATTACTTTTCTTCCATTCGCTAAA
AAAAAAAAAAGGATAGCGAATGATCGATTCACCATTGATAGCTTTAACCCTAAAAGGAGG
GATATTGTGATAATAGCGGCAGATCAAACAAGAACTTGA

Peptide Sequence

PEP ID

BAC19892
PEP Infomation

pep chromosome:IRGSP-1.0:Mt:321368:321886:-1 gene:BAC19892 transcript:BAC19892 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps1 description:Ribosomal protein S1
Sequence

MFLVDAGLGTPKICMQDELTGLPIKRATRFENKVGSKNVVAGESLIKKRIEERFFIDLVA
GESLIKERAAARFNDFVGSLDVAAGEPLLLPQRFRQNRAWIELKKIWQTKKKVKGFRIKK
IKGGYSVAIAGFITFLPFAKKKKRIANDRFTIDSFNPKRRDIVIIAADQTRT

Transcript Sequence

Transcript ID

BAC19892
Transcript Infomation

cdna chromosome:IRGSP-1.0:Mt:321368:321886:-1 gene:BAC19892 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps1 description:Ribosomal protein S1
Sequence

ATGTTCTTGGTGGATGCAGGCCTTGGTACCCCCAAAATTTGTATGCAAGATGAGCTTACA
GGACTGCCAATCAAGCGAGCCACCAGGTTTGAGAATAAGGTGGGATCCAAGAATGTAGTG
GCTGGTGAATCACTGATCAAAAAGCGGATTGAAGAGAGATTCTTCATCGATCTAGTGGCC
GGTGAATCACTGATCAAAGAGCGAGCAGCCGCCAGGTTTAATGATTTTGTGGGATCCCTG
GATGTAGCGGCTGGCGAACCGCTTCTTCTTCCACAAAGATTCAGACAAAACCGAGCTTGG
ATAGAACTGAAGAAGATTTGGCAAACGAAGAAAAAGGTCAAAGGGTTTCGTATTAAAAAA
ATCAAAGGAGGTTATTCAGTAGCCATCGCAGGTTTCATTACTTTTCTTCCATTCGCTAAA
AAAAAAAAAAGGATAGCGAATGATCGATTCACCATTGATAGCTTTAACCCTAAAAGGAGG
GATATTGTGATAATAGCGGCAGATCAAACAAGAACTTGA