Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

BAC19889
CDS Infomation

cds chromosome:IRGSP-1.0:Mt:299804:300529:-1 gene:BAC19889 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf241 description:hypothetical protein
Sequence

ATGCATATTTTATCATGTTCTTGTCTTAATGTTGTGCAGATGGTTGTCATAATAGTGTAT
GTTTTCTTGTACGGAAGACTTTACTTAGCATTAAGTGGACTTGAGTTTGCAATTATGAAG
CAAGCACGGATGAGAGGGAATCGTGCACTTCAAGCGGCTATGGGATCTCAGTCTATTGTG
CAGCTAGGTCTTTTGATGGCCTTGCCAATGTTTATGGGGATTGGACTAGAAAGAGGTTTC
AGAAGCGCCCTGGGGGATTTCATAATCATGCAGCTTCAGCTCTGTTCAGTGTTCTTCACT
TTCTACCTTGGGACCAAGTCACATTATTTTGGCCGCACAATTCTCCATGGTGGTGCAAAA
TATAGAGCAACTGGCAGAGGTTTTGTTGTTCGCCATGTAAGGTTTGCTGAGAATTACAGA
ATGTACTCCAGAAGCCATTTTGTGAAAGGACTTGAGCTGATGTTACTGCTAGTAGTCTAT
CAGTTGTATGGTGATGTTGCTACGGATTCGACTGCCTATATACTTCTGACATCATCAATG
TGGTTCTTGGTTATCACTTGGCTATTCGCTCCATTCCTCTTCAATCCATCAGGATTTGAG
TGGCAGAAAATAGTAGATGACTGGACCAAGTGGATTAGCAGTCGAGGTGGCATCGGGGTT
CCTGCTAACAAAGCTTGGGAATCCCGGTGGGAGGAGGAGCAGCAAGCCGCCCCATTGCCT
TTATGA

Peptide Sequence

PEP ID

BAC19889
PEP Infomation

pep chromosome:IRGSP-1.0:Mt:299804:300529:-1 gene:BAC19889 transcript:BAC19889 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf241 description:hypothetical protein
Sequence

MHILSCSCLNVVQMVVIIVYVFLYGRLYLALSGLEFAIMKQARMRGNRALQAAMGSQSIV
QLGLLMALPMFMGIGLERGFRSALGDFIIMQLQLCSVFFTFYLGTKSHYFGRTILHGGAK
YRATGRGFVVRHVRFAENYRMYSRSHFVKGLELMLLLVVYQLYGDVATDSTAYILLTSSM
WFLVITWLFAPFLFNPSGFEWQKIVDDWTKWISSRGGIGVPANKAWESRWEEEQQAAPLP
L

Transcript Sequence

Transcript ID

BAC19889
Transcript Infomation

cdna chromosome:IRGSP-1.0:Mt:299804:300529:-1 gene:BAC19889 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf241 description:hypothetical protein
Sequence

ATGCATATTTTATCATGTTCTTGTCTTAATGTTGTGCAGATGGTTGTCATAATAGTGTAT
GTTTTCTTGTACGGAAGACTTTACTTAGCATTAAGTGGACTTGAGTTTGCAATTATGAAG
CAAGCACGGATGAGAGGGAATCGTGCACTTCAAGCGGCTATGGGATCTCAGTCTATTGTG
CAGCTAGGTCTTTTGATGGCCTTGCCAATGTTTATGGGGATTGGACTAGAAAGAGGTTTC
AGAAGCGCCCTGGGGGATTTCATAATCATGCAGCTTCAGCTCTGTTCAGTGTTCTTCACT
TTCTACCTTGGGACCAAGTCACATTATTTTGGCCGCACAATTCTCCATGGTGGTGCAAAA
TATAGAGCAACTGGCAGAGGTTTTGTTGTTCGCCATGTAAGGTTTGCTGAGAATTACAGA
ATGTACTCCAGAAGCCATTTTGTGAAAGGACTTGAGCTGATGTTACTGCTAGTAGTCTAT
CAGTTGTATGGTGATGTTGCTACGGATTCGACTGCCTATATACTTCTGACATCATCAATG
TGGTTCTTGGTTATCACTTGGCTATTCGCTCCATTCCTCTTCAATCCATCAGGATTTGAG
TGGCAGAAAATAGTAGATGACTGGACCAAGTGGATTAGCAGTCGAGGTGGCATCGGGGTT
CCTGCTAACAAAGCTTGGGAATCCCGGTGGGAGGAGGAGCAGCAAGCCGCCCCATTGCCT
TTATGA