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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

BAC19873
CDS Infomation

cds chromosome:IRGSP-1.0:Mt:181352:182026:-1 gene:BAC19873 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf224 description:hypothetical protein
Sequence

ATGCCTCAACTTGATAAATTGACTTATTTCTCACAATTCTTCTGGTTCTGCCTTCTCCTA
GTAAGTAGCTCACGAGGAATGGGGGGACAGATTCCCTCAATCTCGAGATACGAACGTATC
GTGTCAAAATTTATTGGAAAATTTTTCTTCAGTGGTTTGTGGACCGATAGACCTTACCTT
ATTTTTATTTTTATTTCCCTCATTTTTTTGGGACTTTATATTGTCAGAAGGAGGAGGGAG
GCTTTTTCCTCTACTCTAATTGGATCCTTCTCTGGTTTGTTTTCGTTTTTTTTTGTGGAA
GGCCCAGAGGTTGCTTCCGCTATGGAGAACCCACCAGGGCCTGGGCCTAGTGAAGCGGGT
CCTTCCGGATCCGCTGCGGGCAAGTCAGCTGAAGCCTCTACTCCGTCGTCCTCTTTTTTC
AATGGGCTTTCGGGCCAGATACCCGCACCGGATTCCCCCGGGGAAGAGGTGCCGCAAGGG
GAACAGCCCCGTTTTGACCCTTATTCAATTCCGGAAGTTCCCCTGGAACACGTATTCGGG
GCTGTTCCAGATCGGGGAGAGCCATCCACAAGCCACACCCCGCCGAACCCTGAACCTCAA
CTTGGAGAAGAAAATGCCGGGCCATCAAACCACCAAATTCAACATGATGTTATAAGAAGC
AGACTTGAAACTTGA

Peptide Sequence

PEP ID

BAC19873
PEP Infomation

pep chromosome:IRGSP-1.0:Mt:181352:182026:-1 gene:BAC19873 transcript:BAC19873 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf224 description:hypothetical protein
Sequence

MPQLDKLTYFSQFFWFCLLLVSSSRGMGGQIPSISRYERIVSKFIGKFFFSGLWTDRPYL
IFIFISLIFLGLYIVRRRREAFSSTLIGSFSGLFSFFFVEGPEVASAMENPPGPGPSEAG
PSGSAAGKSAEASTPSSSFFNGLSGQIPAPDSPGEEVPQGEQPRFDPYSIPEVPLEHVFG
AVPDRGEPSTSHTPPNPEPQLGEENAGPSNHQIQHDVIRSRLET

Transcript Sequence

Transcript ID

BAC19873
Transcript Infomation

cdna chromosome:IRGSP-1.0:Mt:181352:182026:-1 gene:BAC19873 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf224 description:hypothetical protein
Sequence

ATGCCTCAACTTGATAAATTGACTTATTTCTCACAATTCTTCTGGTTCTGCCTTCTCCTA
GTAAGTAGCTCACGAGGAATGGGGGGACAGATTCCCTCAATCTCGAGATACGAACGTATC
GTGTCAAAATTTATTGGAAAATTTTTCTTCAGTGGTTTGTGGACCGATAGACCTTACCTT
ATTTTTATTTTTATTTCCCTCATTTTTTTGGGACTTTATATTGTCAGAAGGAGGAGGGAG
GCTTTTTCCTCTACTCTAATTGGATCCTTCTCTGGTTTGTTTTCGTTTTTTTTTGTGGAA
GGCCCAGAGGTTGCTTCCGCTATGGAGAACCCACCAGGGCCTGGGCCTAGTGAAGCGGGT
CCTTCCGGATCCGCTGCGGGCAAGTCAGCTGAAGCCTCTACTCCGTCGTCCTCTTTTTTC
AATGGGCTTTCGGGCCAGATACCCGCACCGGATTCCCCCGGGGAAGAGGTGCCGCAAGGG
GAACAGCCCCGTTTTGACCCTTATTCAATTCCGGAAGTTCCCCTGGAACACGTATTCGGG
GCTGTTCCAGATCGGGGAGAGCCATCCACAAGCCACACCCCGCCGAACCCTGAACCTCAA
CTTGGAGAAGAAAATGCCGGGCCATCAAACCACCAAATTCAACATGATGTTATAAGAAGC
AGACTTGAAACTTGA