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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

BAC19860
CDS Infomation

cds chromosome:IRGSP-1.0:Mt:53424:53891:1 gene:BAC19860 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orfB description:ORFB protein
Sequence

ATGCCTCAACTTGATAAATTGACTTATTTCTCACAATTCTTCTGGTTATGCCTTTTCCTC
TTTAGTTTTTATATTCTCTTATTAAATAATAATAATGGAATACTTGGAATTAGCAGAATT
CTCAAACTACGGAACCAACTGCTTTCGCACCGGGGGAACAAGATCCGTTTCAAGGACCCT
AAGAATTTGGAAGATATCTCGAGAAAAGGTTTTAGCACCGGTCTCTCATATATGTACTCC
AGTTTATCCGAAGTATCCCAATGGTGTAAGACCGTCGACTATTTGGGAAAAAGGAGGAAA
ATCACTCTGATCTCAGATTTCGGAGAAATAAGTGGCTCACGAGGAATGGAGAGACAGATT
CTCTATTTGATCTCGAAGTCCTCATATAACACTTCTTCCAGTCGGATCACTTGTTGGAAA
AAAATAATGCTCACACATGTTCCACACGGGCAAGGAAGCATAATCTAA

Peptide Sequence

PEP ID

BAC19860
PEP Infomation

pep chromosome:IRGSP-1.0:Mt:53424:53891:1 gene:BAC19860 transcript:BAC19860 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orfB description:ORFB protein
Sequence

MPQLDKLTYFSQFFWLCLFLFSFYILLLNNNNGILGISRILKLRNQLLSHRGNKIRFKDP
KNLEDISRKGFSTGLSYMYSSLSEVSQWCKTVDYLGKRRKITLISDFGEISGSRGMERQI
LYLISKSSYNTSSSRITCWKKIMLTHVPHGQGSII

Transcript Sequence

Transcript ID

BAC19860
Transcript Infomation

cdna chromosome:IRGSP-1.0:Mt:53424:53891:1 gene:BAC19860 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orfB description:ORFB protein
Sequence

ATGCCTCAACTTGATAAATTGACTTATTTCTCACAATTCTTCTGGTTATGCCTTTTCCTC
TTTAGTTTTTATATTCTCTTATTAAATAATAATAATGGAATACTTGGAATTAGCAGAATT
CTCAAACTACGGAACCAACTGCTTTCGCACCGGGGGAACAAGATCCGTTTCAAGGACCCT
AAGAATTTGGAAGATATCTCGAGAAAAGGTTTTAGCACCGGTCTCTCATATATGTACTCC
AGTTTATCCGAAGTATCCCAATGGTGTAAGACCGTCGACTATTTGGGAAAAAGGAGGAAA
ATCACTCTGATCTCAGATTTCGGAGAAATAAGTGGCTCACGAGGAATGGAGAGACAGATT
CTCTATTTGATCTCGAAGTCCTCATATAACACTTCTTCCAGTCGGATCACTTGTTGGAAA
AAAATAATGCTCACACATGTTCCACACGGGCAAGGAAGCATAATCTAA