Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

BAC19859
CDS Infomation

cds chromosome:IRGSP-1.0:Mt:49359:50135:-1 gene:BAC19859 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf258 description:Orf258 protein [Source:UniProtKB/TrEMBL;Acc:Q8HCR0]
Sequence

ATGAAGCCGTTAGGGAGAATGACTGATGATCCAGTTCAGTTAGTTGCCGATCTCATGTTG
CAGAATACAAACCAATGGGATGTGGAGAAGGTGCAGCGGATTTTCTTTCCGTTGGATGCG
GCTGCTATTCTGAACATGCCAAGGCCGAGAACAGAGCAAGATGATTTTTGGGCTTGGGCA
TGGGACAGAACGGGCATATTTACGGTGAGATCTGCGTACAGGGAACTCATTCAGCGCTGT
GGCCTGTCTGAACCTGCTACGGGATCGTCCACGGGTGACGAGGCTACCTGGAAAGCACTG
TGGAGACTCCGGATAATGCCTAAGATAAGAGTGTTCTGGTGGCGGGTGGTGAAAAATTTG
CTACCCTGTGCTGCTGAACTCCGCAGAAGCCATATGAAAGAAATAAGTAATTGTCCTCTC
TGTGGCAATGACAATGAAACAAAGTTTCATGCATTAGTCGAGTGTGAGCATGCAAAATTG
TTTTGGAGTGCGGCTCAGGATCTTTTTGATCTCAAGATGCCACGGTTAAACCCAGCTACA
TGGTCGCGGGACGTGTTGGATGCAGATATCATGAGCAAACGGGAGGCGGCAATTGCAGTC
TCTGTAATGTGGACCATCTGGGGGAGCCGAAACAGCTACAACCATGGCGATGTCAAGTAC
CAGCCGTTGAGTTCTGTTGAATTGGTTGATGAGCTCATTAATCTCTGGAGATTCCAGCTC
AGGAGGACCCATCGGCTGTGGTTCAGAAGTGGGCTCGACCTGCTTTGGGATGGATGA

Peptide Sequence

PEP ID

BAC19859
PEP Infomation

pep chromosome:IRGSP-1.0:Mt:49359:50135:-1 gene:BAC19859 transcript:BAC19859 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf258 description:Orf258 protein [Source:UniProtKB/TrEMBL;Acc:Q8HCR0]
Sequence

MKPLGRMTDDPVQLVADLMLQNTNQWDVEKVQRIFFPLDAAAILNMPRPRTEQDDFWAWA
WDRTGIFTVRSAYRELIQRCGLSEPATGSSTGDEATWKALWRLRIMPKIRVFWWRVVKNL
LPCAAELRRSHMKEISNCPLCGNDNETKFHALVECEHAKLFWSAAQDLFDLKMPRLNPAT
WSRDVLDADIMSKREAAIAVSVMWTIWGSRNSYNHGDVKYQPLSSVELVDELINLWRFQL
RRTHRLWFRSGLDLLWDG

Transcript Sequence

Transcript ID

BAC19859
Transcript Infomation

cdna chromosome:IRGSP-1.0:Mt:49359:50135:-1 gene:BAC19859 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf258 description:Orf258 protein [Source:UniProtKB/TrEMBL;Acc:Q8HCR0]
Sequence

ATGAAGCCGTTAGGGAGAATGACTGATGATCCAGTTCAGTTAGTTGCCGATCTCATGTTG
CAGAATACAAACCAATGGGATGTGGAGAAGGTGCAGCGGATTTTCTTTCCGTTGGATGCG
GCTGCTATTCTGAACATGCCAAGGCCGAGAACAGAGCAAGATGATTTTTGGGCTTGGGCA
TGGGACAGAACGGGCATATTTACGGTGAGATCTGCGTACAGGGAACTCATTCAGCGCTGT
GGCCTGTCTGAACCTGCTACGGGATCGTCCACGGGTGACGAGGCTACCTGGAAAGCACTG
TGGAGACTCCGGATAATGCCTAAGATAAGAGTGTTCTGGTGGCGGGTGGTGAAAAATTTG
CTACCCTGTGCTGCTGAACTCCGCAGAAGCCATATGAAAGAAATAAGTAATTGTCCTCTC
TGTGGCAATGACAATGAAACAAAGTTTCATGCATTAGTCGAGTGTGAGCATGCAAAATTG
TTTTGGAGTGCGGCTCAGGATCTTTTTGATCTCAAGATGCCACGGTTAAACCCAGCTACA
TGGTCGCGGGACGTGTTGGATGCAGATATCATGAGCAAACGGGAGGCGGCAATTGCAGTC
TCTGTAATGTGGACCATCTGGGGGAGCCGAAACAGCTACAACCATGGCGATGTCAAGTAC
CAGCCGTTGAGTTCTGTTGAATTGGTTGATGAGCTCATTAATCTCTGGAGATTCCAGCTC
AGGAGGACCCATCGGCTGTGGTTCAGAAGTGGGCTCGACCTGCTTTGGGATGGATGA