Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g100310.2.1
CDS Infomation

Protein kinase family protein (AHRD V3.3 *** AT3G13670.1)
Sequence

ATGGGGGATCAGAGCGGTGGGTTGAGTGCTAATAACAAAGGAACTGAGCAAGATGATGAT
GGTAAAAACTCTCCTATCCCTAAAAAGGTGAAAGTAGGAATGTCGCCAGTTTATCAGGTT
GAAAGGAAGTTAGGTAAAGGTGGGTTTGGTCAGGTCTTTTTGGGTCGTCGTCTTTCTGGT
GGAAATGAATCTTCAAATGGTCAAGGGGCTGTTGAGGTTGCACTGAAATTTGAGCATATG
AAAAGCAAAGGCTGTAACTATGGTCCTCCACATGAGTGGCAAGTTTACAATACTCTTGGA
GGCAGCCATGGAGTGCCTAGCGTGCATTATAAAGGGAGGGTAGGAGACTATTACGTAATG
GTTATGGACATGCTAGGGCCTAGCTTATGGGATGTATGGAATTCCTCTGGGCAGGCGATG
TCTGCAGAAATGGTAGCATGTATTGCAGTTGAGTCTCTGTCAATTTTAAGCATAATGCAT
GCACAAGGTTATGTGCATGGAGATGTAAAGCCAGAGAACTTTTTGCTTGGTCAGCCATCA
ACTCTGCAGGAGAAGAAGTTGTTCCTTGTCGACTTGGGACTAGCAACAAAGTGGAGAGAG
AATGTGAAAGGTCCGCATGTGGTATATGATCAGCGACCTGACATGTTTAGAGGGACTGTT
CGGTATGCAAGTGCTCATGCACACTTGGGAAGGACTGCCAGTAGAAGAGATGATCTGGAA
TCACTTGCATATACACTCATTTTTCTTCACAGAGGCAGGTTGCCATGGCAAGGATTTCAG
GGAGATAACAAATCGTTTTTGGTCTGCAAAAAGAAGATGGCAACATCTCCAGAAATGCTT
TGCTGTTTCTGTCCATCACCTCTGAGAGAATTTCTTGATATAGTAATAAACATGAAATTT
GATGAAGAACCTAATTATTCGAAGTTAATCTCCTTATTTGGGAGCTTGCTTGGACCTGAT
CCTGCTATAAGGCCAATCAACACTGATGGTGCCCAAAAGATTCTTCAAGTTGGCCAAAAG
CGGGGGAGATTAAATGTAGAGGAGGGGGAAGAGCAGCCTAGAAAGAAGGTTCGCATCGGA
GTTCCTGCATCACAGTGGATTTCGATTTACAATGCTAGGAAGCCCATGAAACAGAGGTAC
CATTATAATGTAACAGATACAAGACTAGCAGAGCATGTGGAGAAAGGGACTGAAGATGGA
TTATACATAAGTTGTGTGGCATCTTGTTCCGACTTCTGGGCTATTATCATGGATGCTGGA
ACCAATTTCACTAGCCAAGTTTATGAGCTATCACAATCATTCTTGCACAAGGAGTGGGTT
ATGGAACAGTGGGAGAAGAACTATTATATTAGTTCTCTTGCTGGTGCTACCAATGGAAGC
TCTCTTGTTGTAATGTCAAAAGGCACACAGTTCAGTCAGCAGTCTTATAAAGTAAGTGAG
TCATTCCCATTCAAGTGGATAAGCAAGAAGTGGAAAGAAGGGTTCAATGTAACCTCCATG
GCAACTGCTGGAAGTAGGTGGGCGGTTGTTATGTCTCGTAATTCAGGTGTCAGTAACCAG
GTAGTGGAGCTTGATTTTCTTTATCCAAGTGAAGGCATTCATAAACGATGGGACAATGGT
TATCGTATTACAGCAACAGCTGCTACATTAGATCAAGCTGCTCTTATCCTGAGTGTGCCT
CGACGAAGGCCTGGCGATGAGACTCAGGAGACATTGAGAACATCTCAGTTTCCAAGCACA
CATGTTAAGGAAAAATGGGCAAAAAATCTCTATCTTTCCTGTCTCTGCTATGGACGAACT
GTATCTTGA

Peptide Sequence

PEP ID

Solyc12g100310.2.1
PEP Infomation

Protein kinase family protein (AHRD V3.3 *** AT3G13670.1)
Sequence

MGDQSGGLSANNKGTEQDDDGKNSPIPKKVKVGMSPVYQVERKLGKGGFGQVFLGRRLSG
GNESSNGQGAVEVALKFEHMKSKGCNYGPPHEWQVYNTLGGSHGVPSVHYKGRVGDYYVM
VMDMLGPSLWDVWNSSGQAMSAEMVACIAVESLSILSIMHAQGYVHGDVKPENFLLGQPS
TLQEKKLFLVDLGLATKWRENVKGPHVVYDQRPDMFRGTVRYASAHAHLGRTASRRDDLE
SLAYTLIFLHRGRLPWQGFQGDNKSFLVCKKKMATSPEMLCCFCPSPLREFLDIVINMKF
DEEPNYSKLISLFGSLLGPDPAIRPINTDGAQKILQVGQKRGRLNVEEGEEQPRKKVRIG
VPASQWISIYNARKPMKQRYHYNVTDTRLAEHVEKGTEDGLYISCVASCSDFWAIIMDAG
TNFTSQVYELSQSFLHKEWVMEQWEKNYYISSLAGATNGSSLVVMSKGTQFSQQSYKVSE
SFPFKWISKKWKEGFNVTSMATAGSRWAVVMSRNSGVSNQVVELDFLYPSEGIHKRWDNG
YRITATAATLDQAALILSVPRRRPGDETQETLRTSQFPSTHVKEKWAKNLYLSCLCYGRT
VS*

Transcript Sequence

Transcript ID

Solyc12g100310.2.1
Transcript Infomation

Protein kinase family protein (AHRD V3.3 *** AT3G13670.1)
Sequence

GAAAACCAAAAACGCATGAATAGACGCCTCTCTCTAATAATATCAACATATTATACACCC
AAAAACCCAACAGTCGCCTACACTTTTGTTGATATTTCTTTTGGATGTTTCTTCAACAAA
CCCTAGCATCAAGACCTCTTTAATCTTACTGCTCATTCATCTTTCTATTTGTTTCGATCG
CTGTTGAAAACTTGTTGAAGAATTCAAACGATCAATTTTGTATTGATGATGGTCACTTTG
GGTTTTGTTCTACTTGCATTGTTTGTAAAGAACGCTAATGCCTGTAGGTGTTGAAAAACC
AGCAGCCAGCGGGAAGGGAAGAAGTTTCGTAAAGACCTGTGCTGCTAAGGCAAAAGCAGA
AGAGTTGAAGAGGAAATGGGGGATCAGAGCGGTGGGTTGAGTGCTAATAACAAAGGAACT
GAGCAAGATGATGATGGTAAAAACTCTCCTATCCCTAAAAAGGTGAAAGTAGGAATGTCG
CCAGTTTATCAGGTTGAAAGGAAGTTAGGTAAAGGTGGGTTTGGTCAGGTCTTTTTGGGT
CGTCGTCTTTCTGGTGGAAATGAATCTTCAAATGGTCAAGGGGCTGTTGAGGTTGCACTG
AAATTTGAGCATATGAAAAGCAAAGGCTGTAACTATGGTCCTCCACATGAGTGGCAAGTT
TACAATACTCTTGGAGGCAGCCATGGAGTGCCTAGCGTGCATTATAAAGGGAGGGTAGGA
GACTATTACGTAATGGTTATGGACATGCTAGGGCCTAGCTTATGGGATGTATGGAATTCC
TCTGGGCAGGCGATGTCTGCAGAAATGGTAGCATGTATTGCAGTTGAGTCTCTGTCAATT
TTAAGCATAATGCATGCACAAGGTTATGTGCATGGAGATGTAAAGCCAGAGAACTTTTTG
CTTGGTCAGCCATCAACTCTGCAGGAGAAGAAGTTGTTCCTTGTCGACTTGGGACTAGCA
ACAAAGTGGAGAGAGAATGTGAAAGGTCCGCATGTGGTATATGATCAGCGACCTGACATG
TTTAGAGGGACTGTTCGGTATGCAAGTGCTCATGCACACTTGGGAAGGACTGCCAGTAGA
AGAGATGATCTGGAATCACTTGCATATACACTCATTTTTCTTCACAGAGGCAGGTTGCCA
TGGCAAGGATTTCAGGGAGATAACAAATCGTTTTTGGTCTGCAAAAAGAAGATGGCAACA
TCTCCAGAAATGCTTTGCTGTTTCTGTCCATCACCTCTGAGAGAATTTCTTGATATAGTA
ATAAACATGAAATTTGATGAAGAACCTAATTATTCGAAGTTAATCTCCTTATTTGGGAGC
TTGCTTGGACCTGATCCTGCTATAAGGCCAATCAACACTGATGGTGCCCAAAAGATTCTT
CAAGTTGGCCAAAAGCGGGGGAGATTAAATGTAGAGGAGGGGGAAGAGCAGCCTAGAAAG
AAGGTTCGCATCGGAGTTCCTGCATCACAGTGGATTTCGATTTACAATGCTAGGAAGCCC
ATGAAACAGAGGTACCATTATAATGTAACAGATACAAGACTAGCAGAGCATGTGGAGAAA
GGGACTGAAGATGGATTATACATAAGTTGTGTGGCATCTTGTTCCGACTTCTGGGCTATT
ATCATGGATGCTGGAACCAATTTCACTAGCCAAGTTTATGAGCTATCACAATCATTCTTG
CACAAGGAGTGGGTTATGGAACAGTGGGAGAAGAACTATTATATTAGTTCTCTTGCTGGT
GCTACCAATGGAAGCTCTCTTGTTGTAATGTCAAAAGGCACACAGTTCAGTCAGCAGTCT
TATAAAGTAAGTGAGTCATTCCCATTCAAGTGGATAAGCAAGAAGTGGAAAGAAGGGTTC
AATGTAACCTCCATGGCAACTGCTGGAAGTAGGTGGGCGGTTGTTATGTCTCGTAATTCA
GGTGTCAGTAACCAGGTAGTGGAGCTTGATTTTCTTTATCCAAGTGAAGGCATTCATAAA
CGATGGGACAATGGTTATCGTATTACAGCAACAGCTGCTACATTAGATCAAGCTGCTCTT
ATCCTGAGTGTGCCTCGACGAAGGCCTGGCGATGAGACTCAGGAGACATTGAGAACATCT
CAGTTTCCAAGCACACATGTTAAGGAAAAATGGGCAAAAAATCTCTATCTTTCCTGTCTC
TGCTATGGACGAACTGTATCTTGAGAGGATGGAAAATCTGATGTTGGACATTTTTCCTTC
ACCCCTTTTATTTTCTCATTGTCAGTCAATTGTAAAAAGTGAGGAAATCTTAATTATGGT
GGCACTTGCTTCTTTTAGCTTGTTTGGATAGTGGCAAACTTTCTCGTCTCTTGTGTACAT
ACAATTAACAGCACAAAATTACAAATCTATGAATCTTTTATATCTGTTGTGTTCGGTGTT
ACAAAAAAAAAAAAAAGAAGCCCAAAGAAAAGTGGCCAACTGAAGAAAGGGTTTCCTGTG
AGAAACTTCATTAGAATCTTAGCTACTCCAC