Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g100270.2.1
CDS Infomation

Fatty acid hydroxylase superfamily (AHRD V3.3 *** AT1G02205.2)
Sequence

ATGGCTTCTAAACCTGGAATTCTCTCAGAATGGCCATGGGCAAACCTTGGCAACTTTAAG
TACTTGGTGTTGGCACCATTTGTTGGTCATAGCATATACTCATTCTTGAGGGATGGAGAT
ATTGGATACATAGCCATACTTCCATTTCTACTCTTCAGATTTATTCACAACCAGATATGG
ATATCGTTATCGCGCCACAGGACTGCTAAGGGTAATAATAGAATTGTTGATAGAAGCATT
GAGTTTGATCAAGTTGATAGAGAAAACAACTGGGATGATCAAATTATATTTAACGGGCTA
TTATACTATGTTGGATACCTGAGAATGGAACAAGTTCATCACTTGCCTCTATGGAGAAGT
GGTGGATTCATTGTAACTGCATTGGCCCATATTGGTCCTGTTGAGTTTATCTATTATTGG
TTTCATAGAGCTCTGCATCACCATTTTCTCTATTCGCGTTATCATTCTCATCATCACTCC
TCTATTGTTACTCAACCTATCAGTGCATTTATTCATCCGTTTGCTGAGGTCGCATCATAT
TATGCCATCTTTGCTGTTCCTGTAATCGCAACTGAACTCACTGGGACTACTTCTATAGCT
ACAATCACTCTTTATGTTATCTTTACTGATTTCATGAACAACTTGGGCCATTGTAACTTT
GAGGTGATTCCAAAGTGGATCTTCTCTCTGTTTCCACCTCTCAAGTACTTGATATATACG
TCCTCGTACCACTCACTACATCACACGCAATTCAGAACTAATTATTCTCTTTTCATGCCA
ATATATGACTATATTTTTGGTACAATGGACAAGTCCAGTGACACATTGTATGAAAAGTCA
CTTGAGAAAAAAGCGGAACTGCCTCATGTGGTTCACCTTACACATCTAACAACCTTACAA
TCCATCTATCATCTCCGTCTAGGATTTTCATCGTTGGCCTCAAAGCCTCACATGACTAGC
TCTAAGTGGTATTTGTGGTTAATGTGGCCTGTCACGCTATGGTCAATACTCATTACTTGG
ATTTATAGTCACACATTTGTTATCGAGAGGAATTTGTTCAAGGATCTCAAATTACAAACT
TGGGCTATTCCAAAGTTTCGCAAACAATACTTTAGTCAATGGCAAAGAAAGAGTATTAAT
AATTTGATCAAGGAAGCCATCATGGAAGCAGATCAGAAAGGCGTAAAGGTTTTGAGCCTC
GGACTCTTAAATCAGGACGAGAAGTTGAATAACAATGGTGAAATTTGCATAAGGAAGCAT
CCTGAGCTGAAAGTTAAATTGGTAGATGGAAGTAGCCTAGTTGTTGCTGTGGTTCTCAAC
TCCATTCCTAAAGGAACTTCCCAAGTGGTATTACAAGCTGGTCGTTTGTCCAAAGTTGCT
AATGCTATTGCCCTCGCCTTGTGTCAACGAGGAATTCAGGTTATCACGTTAGACGAAGAA
GAGTACAAGGGACTTAAAGCAAGGTTTACCCCTGAGGCTGCAGCTAATTTGGTCTTGTTG
AAAAGTACTTGTGTTTCAAAGACGTGGTTAGTAGATGATGGATTGAGTGAAGATGAACAA
TTGAAAGCACCAAAAGGAACATTGTTTATTCCTTATTCACCATTTCCACCAAAGAAAGTT
CGTGAGGATTGCTTCTACTTGAGCACACCAGCCATGATTTGTCCAAAACATGTTCAAAAT
GTAGACTCTTGTGAGAACTGGCTGCCAAGAAGAGTGATGAGTGCATCGAGAATAGCTGGA
ATTTTGCACGCGTTTGAAGGTTGGAACGAGCACGAGTGTGGTGACATGATGTTTGATATT
GACAAAGTATGGAAAGCTAGTCTTGATCATGGTTTTTCACCATTAGATGTAGAAATAATG
TAG

Peptide Sequence

PEP ID

Solyc12g100270.2.1
PEP Infomation

Fatty acid hydroxylase superfamily (AHRD V3.3 *** AT1G02205.2)
Sequence

MASKPGILSEWPWANLGNFKYLVLAPFVGHSIYSFLRDGDIGYIAILPFLLFRFIHNQIW
ISLSRHRTAKGNNRIVDRSIEFDQVDRENNWDDQIIFNGLLYYVGYLRMEQVHHLPLWRS
GGFIVTALAHIGPVEFIYYWFHRALHHHFLYSRYHSHHHSSIVTQPISAFIHPFAEVASY
YAIFAVPVIATELTGTTSIATITLYVIFTDFMNNLGHCNFEVIPKWIFSLFPPLKYLIYT
SSYHSLHHTQFRTNYSLFMPIYDYIFGTMDKSSDTLYEKSLEKKAELPHVVHLTHLTTLQ
SIYHLRLGFSSLASKPHMTSSKWYLWLMWPVTLWSILITWIYSHTFVIERNLFKDLKLQT
WAIPKFRKQYFSQWQRKSINNLIKEAIMEADQKGVKVLSLGLLNQDEKLNNNGEICIRKH
PELKVKLVDGSSLVVAVVLNSIPKGTSQVVLQAGRLSKVANAIALALCQRGIQVITLDEE
EYKGLKARFTPEAAANLVLLKSTCVSKTWLVDDGLSEDEQLKAPKGTLFIPYSPFPPKKV
REDCFYLSTPAMICPKHVQNVDSCENWLPRRVMSASRIAGILHAFEGWNEHECGDMMFDI
DKVWKASLDHGFSPLDVEIM*

Transcript Sequence

Transcript ID

Solyc12g100270.2.1
Transcript Infomation

Fatty acid hydroxylase superfamily (AHRD V3.3 *** AT1G02205.2)
Sequence

AGTTGGACTGAGCTACTAGCTATAAGTAGTAGGCTAATTTTACTAGGAAAGAGCAAACGG
ACATGGCTTCTAAACCTGGAATTCTCTCAGAATGGCCATGGGCAAACCTTGGCAACTTTA
AGTACTTGGTGTTGGCACCATTTGTTGGTCATAGCATATACTCATTCTTGAGGGATGGAG
ATATTGGATACATAGCCATACTTCCATTTCTACTCTTCAGATTTATTCACAACCAGATAT
GGATATCGTTATCGCGCCACAGGACTGCTAAGGGTAATAATAGAATTGTTGATAGAAGCA
TTGAGTTTGATCAAGTTGATAGAGAAAACAACTGGGATGATCAAATTATATTTAACGGGC
TATTATACTATGTTGGATACCTGAGAATGGAACAAGTTCATCACTTGCCTCTATGGAGAA
GTGGTGGATTCATTGTAACTGCATTGGCCCATATTGGTCCTGTTGAGTTTATCTATTATT
GGTTTCATAGAGCTCTGCATCACCATTTTCTCTATTCGCGTTATCATTCTCATCATCACT
CCTCTATTGTTACTCAACCTATCAGTGCATTTATTCATCCGTTTGCTGAGGTCGCATCAT
ATTATGCCATCTTTGCTGTTCCTGTAATCGCAACTGAACTCACTGGGACTACTTCTATAG
CTACAATCACTCTTTATGTTATCTTTACTGATTTCATGAACAACTTGGGCCATTGTAACT
TTGAGGTGATTCCAAAGTGGATCTTCTCTCTGTTTCCACCTCTCAAGTACTTGATATATA
CGTCCTCGTACCACTCACTACATCACACGCAATTCAGAACTAATTATTCTCTTTTCATGC
CAATATATGACTATATTTTTGGTACAATGGACAAGTCCAGTGACACATTGTATGAAAAGT
CACTTGAGAAAAAAGCGGAACTGCCTCATGTGGTTCACCTTACACATCTAACAACCTTAC
AATCCATCTATCATCTCCGTCTAGGATTTTCATCGTTGGCCTCAAAGCCTCACATGACTA
GCTCTAAGTGGTATTTGTGGTTAATGTGGCCTGTCACGCTATGGTCAATACTCATTACTT
GGATTTATAGTCACACATTTGTTATCGAGAGGAATTTGTTCAAGGATCTCAAATTACAAA
CTTGGGCTATTCCAAAGTTTCGCAAACAATACTTTAGTCAATGGCAAAGAAAGAGTATTA
ATAATTTGATCAAGGAAGCCATCATGGAAGCAGATCAGAAAGGCGTAAAGGTTTTGAGCC
TCGGACTCTTAAATCAGGACGAGAAGTTGAATAACAATGGTGAAATTTGCATAAGGAAGC
ATCCTGAGCTGAAAGTTAAATTGGTAGATGGAAGTAGCCTAGTTGTTGCTGTGGTTCTCA
ACTCCATTCCTAAAGGAACTTCCCAAGTGGTATTACAAGCTGGTCGTTTGTCCAAAGTTG
CTAATGCTATTGCCCTCGCCTTGTGTCAACGAGGAATTCAGGTTATCACGTTAGACGAAG
AAGAGTACAAGGGACTTAAAGCAAGGTTTACCCCTGAGGCTGCAGCTAATTTGGTCTTGT
TGAAAAGTACTTGTGTTTCAAAGACGTGGTTAGTAGATGATGGATTGAGTGAAGATGAAC
AATTGAAAGCACCAAAAGGAACATTGTTTATTCCTTATTCACCATTTCCACCAAAGAAAG
TTCGTGAGGATTGCTTCTACTTGAGCACACCAGCCATGATTTGTCCAAAACATGTTCAAA
ATGTAGACTCTTGTGAGAACTGGCTGCCAAGAAGAGTGATGAGTGCATCGAGAATAGCTG
GAATTTTGCACGCGTTTGAAGGTTGGAACGAGCACGAGTGTGGTGACATGATGTTTGATA
TTGACAAAGTATGGAAAGCTAGTCTTGATCATGGTTTTTCACCATTAGATGTAGAAATAA
TGTAGATTATTATTTTGTAAGATCACAGTTATAAGCTTGTAATAATGGTTAATAATTCCT
AGCAACTCAATGGCCTGTACTATATGTAATAAATAACTTTTGACAAATTTAAAAGACCAT
TATTACCTAAACACAAACATATAAGGATCCATTTTTCATTACAAAAATCAACTATAATAA
TCCTCTCTGAGTTCATGGATCGGGTCGGCTAAGCAAAGAATGTATTTCTCTGTTTCTTGT
AAAGAAGA