Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g100000.2.1
CDS Infomation	U-box domain-containing 4-like protein (AHRD V3.3 *** A0A0B0PVU4_GOSAR)
Sequence	ATGACTATCACAAAGTCTATTAAGGCTCAAATGGAAGGCTTGGGAGCAAACTCAGACAGC TTTGCAAAACTTGCGGATTGCCTAAGATTGAAGTCAAACCAAGAGCTTTTGATTGAGCTT GTGGCCCTTGAAAAATTGAAGGAGAATGCTGAACAAGCTGAAAAGACTGAGGAAGTTGAA TATATTGAGCAAATTATAGCTCTTGTTTCCCATATGCATGACTGCTTCATCACAATGAAA CAGTCTCAGACCTGCAGGCCTGTGACGATACCTCCTGATTTTTGTTGCCCCCTCTCACTC GAGTTGATGACCGACCCTGTAATTGTTGCTACTGGACAAACTTATGAGCGAGCTTTTATA AGGGAATGGATTGATCTCGGTCTTACTGTGTGTCCTAAGACAAGGCAAATGCTGGGGCAC ACAACTCTCATTCCTAATTACACCGTTAAGGCACTTATTGCAAATTGGTGTGAGTCAAAC AATGTAAAGCTTCCTGATCCAACAAAATCTCTGAGCTTGAATCAGGCATCTTCACTTCTA GCACATGCGTATTCTGGCATGCCCAGGGATACCCAGGGTATTCCCCTTCTGAGGGGCAAT CACTCTTCATCACCTGATTCTTCTCGCTCTTTAAGCTCTCCGAGGAAGATTTGTTCATCA AGTATGACCCAAAGAGAAGGATTATCTCCATCTCATCCCCATTCCTCTTTGGATGATTCT TTACCTAGAGTTGCTAGTAATATGCTTGCTCTGGATGTTGTAAGGATATCTATTAAGACT TCTGAAGAACGGATGGCCCACTCTGGAGAGATAAACTCACATGGTCATTGTATGTTAGCA GCCAATAAACACTCCCTTGTAGGTCATAATCGAACCACCTCGGCACCCAGCACACTATCT AATTCAAACTTTTCACCGACAATTCCTGGTGATGGAAATGAAGTGTTCTCAATGTCAGCA GCAGCTGCGACTGATGCGTGTGATGTATCAGAATCCCAACCTGCTGCTCCATTGTCTGTT CTACAAGGGGAGCCGGAATTCCCATCCATGCCAGAGACAAGAGTTCGAAATCAATCCATC TGGCTTAGACCTTCTGAGAGATTTCCTAGAATAGTTTCTTCTGCTACGGTTGAAAGAAGG GCTGATCTTTTGGAACTTGAGGAGCAAGTTAGGAAGCTGGTTCAGGATTTGAGTAGCAAT TCCATTGATGTGCAAAGAGATGCCACAGCTGAACTCCGGTTACTTGCCAAGCACAATATG GATAATCGTATTGTAATGGCAAATTGTGGTTCCATCAACTTGTTGGTCAACTTACTTCAT TCAGAAGATATGAATGTACAGGAAAATGCTGTTACCACACTTCTCAACTTATCAATTAAT GACAACAACAAGTGTTTGATTGCAAATGCTGATGCAATTGAACCTCTGATTCATGTCCTA CACACAGGGAGTGGTGAGGCTAAAGAAAACTCGGCTGCTACACTTTTTAGCCTTTCTGTT ATTGAGGATAACAAGATGAAGATTGGGAGGTCTGGTGCTATCAAGCCTCTTGTGGATTTA TTGGGAAATGGAAGTCCTAGGGGCAAGAAAGACGCAGCGACAGCTTTGTTTAATTTGTCA ATACTTCATGAAAACAAGGGTCGCATTGTGCAGGCTGGTGCTGTTAAGTTCCTTGTAGAG TTGATGGACCCTGCTGCTGGGATGGTTGACAAGGCTGTTGCTGTTTTATCAAATCTCGCA ACCATTCATGAGGGAAGAGCAGCAATTGGTCAGGAAGGAGGGATACCTCTTCTGGTTGAG GTTGTTGAGCTCGGTTCTGCAAGAGGTAGGGAGAACGCGGCAGCAGCTCTGCTGCAATTA TGCACTAACAGTAGCAGGTTCTGCAACATGGTTCTCCAGGAAGGAGCTGTACCTCCGTTA GTAGCATTGTCACAGTCTGGCACCGCAAGAGCCAGAGAAAAGGCTCAGGGACTTCTTAGC TACTTCAGAAACCAACGGCATGGTAATGCAGGGAGGGGCTGA

Peptide Sequence

PEP ID	Solyc12g100000.2.1
PEP Infomation	U-box domain-containing 4-like protein (AHRD V3.3 *** A0A0B0PVU4_GOSAR)
Sequence	MTITKSIKAQMEGLGANSDSFAKLADCLRLKSNQELLIELVALEKLKENAEQAEKTEEVE YIEQIIALVSHMHDCFITMKQSQTCRPVTIPPDFCCPLSLELMTDPVIVATGQTYERAFI REWIDLGLTVCPKTRQMLGHTTLIPNYTVKALIANWCESNNVKLPDPTKSLSLNQASSLL AHAYSGMPRDTQGIPLLRGNHSSSPDSSRSLSSPRKICSSSMTQREGLSPSHPHSSLDDS LPRVASNMLALDVVRISIKTSEERMAHSGEINSHGHCMLAANKHSLVGHNRTTSAPSTLS NSNFSPTIPGDGNEVFSMSAAAATDACDVSESQPAAPLSVLQGEPEFPSMPETRVRNQSI WLRPSERFPRIVSSATVERRADLLELEEQVRKLVQDLSSNSIDVQRDATAELRLLAKHNM DNRIVMANCGSINLLVNLLHSEDMNVQENAVTTLLNLSINDNNKCLIANADAIEPLIHVL HTGSGEAKENSAATLFSLSVIEDNKMKIGRSGAIKPLVDLLGNGSPRGKKDAATALFNLS ILHENKGRIVQAGAVKFLVELMDPAAGMVDKAVAVLSNLATIHEGRAAIGQEGGIPLLVE VVELGSARGRENAAAALLQLCTNSSRFCNMVLQEGAVPPLVALSQSGTARAREKAQGLLS YFRNQRHGNAGRG*

Transcript Sequence

Transcript ID	Solyc12g100000.2.1
Transcript Infomation	U-box domain-containing 4-like protein (AHRD V3.3 *** A0A0B0PVU4_GOSAR)
Sequence	ATGACTATCACAAAGTCTATTAAGGCTCAAATGGAAGGCTTGGGAGCAAACTCAGACAGC TTTGCAAAACTTGCGGATTGCCTAAGATTGAAGTCAAACCAAGAGCTTTTGATTGAGCTT GTGGCCCTTGAAAAATTGAAGGAGAATGCTGAACAAGCTGAAAAGACTGAGGAAGTTGAA TATATTGAGCAAATTATAGCTCTTGTTTCCCATATGCATGACTGCTTCATCACAATGAAA CAGTCTCAGACCTGCAGGCCTGTGACGATACCTCCTGATTTTTGTTGCCCCCTCTCACTC GAGTTGATGACCGACCCTGTAATTGTTGCTACTGGACAAACTTATGAGCGAGCTTTTATA AGGGAATGGATTGATCTCGGTCTTACTGTGTGTCCTAAGACAAGGCAAATGCTGGGGCAC ACAACTCTCATTCCTAATTACACCGTTAAGGCACTTATTGCAAATTGGTGTGAGTCAAAC AATGTAAAGCTTCCTGATCCAACAAAATCTCTGAGCTTGAATCAGGCATCTTCACTTCTA GCACATGCGTATTCTGGCATGCCCAGGGATACCCAGGGTATTCCCCTTCTGAGGGGCAAT CACTCTTCATCACCTGATTCTTCTCGCTCTTTAAGCTCTCCGAGGAAGATTTGTTCATCA AGTATGACCCAAAGAGAAGGATTATCTCCATCTCATCCCCATTCCTCTTTGGATGATTCT TTACCTAGAGTTGCTAGTAATATGCTTGCTCTGGATGTTGTAAGGATATCTATTAAGACT TCTGAAGAACGGATGGCCCACTCTGGAGAGATAAACTCACATGGTCATTGTATGTTAGCA GCCAATAAACACTCCCTTGTAGGTCATAATCGAACCACCTCGGCACCCAGCACACTATCT AATTCAAACTTTTCACCGACAATTCCTGGTGATGGAAATGAAGTGTTCTCAATGTCAGCA GCAGCTGCGACTGATGCGTGTGATGTATCAGAATCCCAACCTGCTGCTCCATTGTCTGTT CTACAAGGGGAGCCGGAATTCCCATCCATGCCAGAGACAAGAGTTCGAAATCAATCCATC TGGCTTAGACCTTCTGAGAGATTTCCTAGAATAGTTTCTTCTGCTACGGTTGAAAGAAGG GCTGATCTTTTGGAACTTGAGGAGCAAGTTAGGAAGCTGGTTCAGGATTTGAGTAGCAAT TCCATTGATGTGCAAAGAGATGCCACAGCTGAACTCCGGTTACTTGCCAAGCACAATATG GATAATCGTATTGTAATGGCAAATTGTGGTTCCATCAACTTGTTGGTCAACTTACTTCAT TCAGAAGATATGAATGTACAGGAAAATGCTGTTACCACACTTCTCAACTTATCAATTAAT GACAACAACAAGTGTTTGATTGCAAATGCTGATGCAATTGAACCTCTGATTCATGTCCTA CACACAGGGAGTGGTGAGGCTAAAGAAAACTCGGCTGCTACACTTTTTAGCCTTTCTGTT ATTGAGGATAACAAGATGAAGATTGGGAGGTCTGGTGCTATCAAGCCTCTTGTGGATTTA TTGGGAAATGGAAGTCCTAGGGGCAAGAAAGACGCAGCGACAGCTTTGTTTAATTTGTCA ATACTTCATGAAAACAAGGGTCGCATTGTGCAGGCTGGTGCTGTTAAGTTCCTTGTAGAG TTGATGGACCCTGCTGCTGGGATGGTTGACAAGGCTGTTGCTGTTTTATCAAATCTCGCA ACCATTCATGAGGGAAGAGCAGCAATTGGTCAGGAAGGAGGGATACCTCTTCTGGTTGAG GTTGTTGAGCTCGGTTCTGCAAGAGGTAGGGAGAACGCGGCAGCAGCTCTGCTGCAATTA TGCACTAACAGTAGCAGGTTCTGCAACATGGTTCTCCAGGAAGGAGCTGTACCTCCGTTA GTAGCATTGTCACAGTCTGGCACCGCAAGAGCCAGAGAAAAGGCTCAGGGACTTCTTAGC TACTTCAGAAACCAACGGCATGGTAATGCAGGGAGGGGCTGATTTATACACTGAACCGTC AACACATACTTTTCTCAAGGTAGCTGACTATATGCTGCTTGTAAATTTAATATTGAGAGT TATTCATGTAGAGGATTTCAGCTTATTGGAGACATTCTAGTAGTTGTGATAGAAAGAAGA ATTATTTGTGGAGGCTCTCTCTTATGAGCCCTTCCGCCCATAACATTATAAATGAATGTG GAAAAGCCTATTATACACGAAACGAGTGTCTGATTGCATCAGTTATAAACTTGGTATATG ATGATGAGCTACTTATTCAGAATCACAAGATTATTGTTTTTTTTTAATGAAGCAAGTATT TGTTTGTGTTTTGATTGTTTGATGTGTTTGGATAAGAAAAAACA