Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g099920.2.1
CDS Infomation

Required to maintain repression 2 (AHRD V3.3 *-* I6XGM5_MAIZE)
Sequence

ATGGTGCGACGGGGATTGGAGGGCTGTGATATTTTGTTTGACATATCCCGTTTAGGGAGA
AAGAGGGCATACTCTTGGAATAAGGAATCGGAGTTTGAAAACAGTGATATTTTTCGTTTC
AAGAGGCAGATTAGAAAAACTAGGAATATTGATGAAGATTATGTACAGTATTTGATGCTT
CTCCTTGACTATGATGAAGAGTCTAAGTGTTGCACAAATGAAGGCGGAAAGGAAGGTCCT
GCTGTTGCTAGAGATAGGTTTAATTTTGACATGGATGAGGATGTGAATGAGTATGAGGAT
GATGAAGACGAGGATGAGGATATTGATCCGGAGTACAAGAAGTTTTTGGCTAATACTAAA
CCAAATGGGATCTCATATATGGTTAAAATTGATAGAAGTGTTGGGTTTCCTGTGTTTGTA
GAGTTTGAGAAAGAGGATGGATCTGATGGAGAGTTTGAATATTTAGGACGGAGAAAACAG
CAGGGTTCTGGGGATGAAGAGGATTTAGGTAATACCAGTAGCAAAGATAAAGTGGAAAGT
CAGCCATTTTCAAGAGTTGTCCTGGAAAATGATGATAATAGATCCGCAGGAGACAACAAT
GCCATATTTGAGCCTTCTGATCCTGTTACTCCGATGGAAAAAGGGCTTATGAGCCTGAAG
CCTAGCTCGGGGGAGAATGGTGAATGCAAGAGGCATCAGAAAGGTGAGACGAAGAATGGA
TCAAATAAGGAGGAGAAGAAAGGGAAAGGGAGAAAATCAGCTAAAGTTACTGCCAAAGAA
GAGGGAGAAGATATAGATGAAGACTATTCCTATCTTCTGGAGAAATTTATATGTAAGAAT
TGGAGCACGACACCCTCATTTATGAGGAAATATAATCTAAAAAGTAAGAAATCATTAACG
ACTGTCCTGGAAAATGTTAGCAATATATCTGTGGGAGACAAAGATACGACCCATGAGATC
TCTGATACTCTATCTCCAAAAAAAAAGAAGAAAAGGGGGCTTACAAGCCAGAAAAATAGC
ACGAAGGCAAATGGTGCATTCAAGAGGCAGGAGAACAGTGACAAAAGGAAAAGATCAAAC
AAAAAGCAGGCGGGCCGGAAAAGGAGAAAATTAGCAGATGTCCCTTTAAACGAAGATTTA
GCTGGGAGAAAATCAGTAGATGTCACTGTCAAAGAAGAGATAGCTGATGTAGATGAAGTC
TCATTTAAAAGTGGTAACAAATTTGAATGCGAGGCTGCTGATGAAGATCTTCAAATAGTT
GTCAGTGGTGATCGTACATTTGGAAAGGAAGGAGACTCTAATCTCGTGGAAGCTTCTTTA
TCAAAACACTGTGAAAATGTTGAGGATAGCTTCCCAAGGAAAAGTGAGCGTTCTGATTTT
TGGTGGAATGTAAAGGCTCTTCTTGAGAGGCCTTACGATCAGAAGGAATATATCGCATTA
TGGAAAGCTGTCAAAAGTAGAAAGCCTACTCTAAAGGATATGGACTTGCGTAATGGGAAA
TTTTACTCGACGAGGCGGTTGGGAAAATCATATTTGGATCATTATAAAGACCTTCATGAA
AAACTTAAACAAGTTGACAACGACAACATAAAGCAGCTAAACATCTTGCGCAGTTTTTTC
TTTTGGTTACAGAATCTCACACAAAAAGGAGCCTTCAGGCCGTGGACAGATCCGGAGTGG
CTCTCATTGGTTGATAATTCTATTGTTCCAATGATTACTTCCGATGAATAA

Peptide Sequence

PEP ID

Solyc12g099920.2.1
PEP Infomation

Required to maintain repression 2 (AHRD V3.3 *-* I6XGM5_MAIZE)
Sequence

MVRRGLEGCDILFDISRLGRKRAYSWNKESEFENSDIFRFKRQIRKTRNIDEDYVQYLML
LLDYDEESKCCTNEGGKEGPAVARDRFNFDMDEDVNEYEDDEDEDEDIDPEYKKFLANTK
PNGISYMVKIDRSVGFPVFVEFEKEDGSDGEFEYLGRRKQQGSGDEEDLGNTSSKDKVES
QPFSRVVLENDDNRSAGDNNAIFEPSDPVTPMEKGLMSLKPSSGENGECKRHQKGETKNG
SNKEEKKGKGRKSAKVTAKEEGEDIDEDYSYLLEKFICKNWSTTPSFMRKYNLKSKKSLT
TVLENVSNISVGDKDTTHEISDTLSPKKKKKRGLTSQKNSTKANGAFKRQENSDKRKRSN
KKQAGRKRRKLADVPLNEDLAGRKSVDVTVKEEIADVDEVSFKSGNKFECEAADEDLQIV
VSGDRTFGKEGDSNLVEASLSKHCENVEDSFPRKSERSDFWWNVKALLERPYDQKEYIAL
WKAVKSRKPTLKDMDLRNGKFYSTRRLGKSYLDHYKDLHEKLKQVDNDNIKQLNILRSFF
FWLQNLTQKGAFRPWTDPEWLSLVDNSIVPMITSDE*

Transcript Sequence

Transcript ID

Solyc12g099920.2.1
Transcript Infomation

Required to maintain repression 2 (AHRD V3.3 *-* I6XGM5_MAIZE)
Sequence

AACCTGGGGAGTATTTCAATTCATGTACGGGAAAATGTCTTGATAATGGACTGTAAGAAG
CTTCAAGAAAGGTAGTAATTGATTTGTTCGTCTGTGGATTGTGGGGATAAGTGGGGTATA
GGAGTGAAGTTGTTTCTCTGATCTGTTTGCTAGTAAATCTGAATCCCATTAAAATGGTGC
GACGGGGATTGGAGGGCTGTGATATTTTGTTTGACATATCCCGTTTAGGGAGAAAGAGGG
CATACTCTTGGAATAAGGAATCGGAGTTTGAAAACAGTGATATTTTTCGTTTCAAGAGGC
AGATTAGAAAAACTAGGAATATTGATGAAGATTATGTACAGTATTTGATGCTTCTCCTTG
ACTATGATGAAGAGTCTAAGTGTTGCACAAATGAAGGCGGAAAGGAAGGTCCTGCTGTTG
CTAGAGATAGGTTTAATTTTGACATGGATGAGGATGTGAATGAGTATGAGGATGATGAAG
ACGAGGATGAGGATATTGATCCGGAGTACAAGAAGTTTTTGGCTAATACTAAACCAAATG
GGATCTCATATATGGTTAAAATTGATAGAAGTGTTGGGTTTCCTGTGTTTGTAGAGTTTG
AGAAAGAGGATGGATCTGATGGAGAGTTTGAATATTTAGGACGGAGAAAACAGCAGGGTT
CTGGGGATGAAGAGGATTTAGGTAATACCAGTAGCAAAGATAAAGTGGAAAGTCAGCCAT
TTTCAAGAGTTGTCCTGGAAAATGATGATAATAGATCCGCAGGAGACAACAATGCCATAT
TTGAGCCTTCTGATCCTGTTACTCCGATGGAAAAAGGGCTTATGAGCCTGAAGCCTAGCT
CGGGGGAGAATGGTGAATGCAAGAGGCATCAGAAAGGTGAGACGAAGAATGGATCAAATA
AGGAGGAGAAGAAAGGGAAAGGGAGAAAATCAGCTAAAGTTACTGCCAAAGAAGAGGGAG
AAGATATAGATGAAGACTATTCCTATCTTCTGGAGAAATTTATATGTAAGAATTGGAGCA
CGACACCCTCATTTATGAGGAAATATAATCTAAAAAGTAAGAAATCATTAACGACTGTCC
TGGAAAATGTTAGCAATATATCTGTGGGAGACAAAGATACGACCCATGAGATCTCTGATA
CTCTATCTCCAAAAAAAAAGAAGAAAAGGGGGCTTACAAGCCAGAAAAATAGCACGAAGG
CAAATGGTGCATTCAAGAGGCAGGAGAACAGTGACAAAAGGAAAAGATCAAACAAAAAGC
AGGCGGGCCGGAAAAGGAGAAAATTAGCAGATGTCCCTTTAAACGAAGATTTAGCTGGGA
GAAAATCAGTAGATGTCACTGTCAAAGAAGAGATAGCTGATGTAGATGAAGTCTCATTTA
AAAGTGGTAACAAATTTGAATGCGAGGCTGCTGATGAAGATCTTCAAATAGTTGTCAGTG
GTGATCGTACATTTGGAAAGGAAGGAGACTCTAATCTCGTGGAAGCTTCTTTATCAAAAC
ACTGTGAAAATGTTGAGGATAGCTTCCCAAGGAAAAGTGAGCGTTCTGATTTTTGGTGGA
ATGTAAAGGCTCTTCTTGAGAGGCCTTACGATCAGAAGGAATATATCGCATTATGGAAAG
CTGTCAAAAGTAGAAAGCCTACTCTAAAGGATATGGACTTGCGTAATGGGAAATTTTACT
CGACGAGGCGGTTGGGAAAATCATATTTGGATCATTATAAAGACCTTCATGAAAAACTTA
AACAAGTTGACAACGACAACATAAAGCAGCTAAACATCTTGCGCAGTTTTTTCTTTTGGT
TACAGAATCTCACACAAAAAGGAGCCTTCAGGCCGTGGACAGATCCGGAGTGGCTCTCAT
TGGTTGATAATTCTATTGTTCCAATGATTACTTCCGATGAATAATCAAGCTGGGACAATT
TGGTGAAATATGTTACCAAAGTATGCTATGCTGAAGTCAGAAATTATACAGTGTGTTGTC
CGTTTTAGTAGTGGATTGTCGTGCTGTCTTTTTCTTTCTTATAACATTGTAGTACTCCTC
TGGAAGATTTCACCCCTCTCAGTCTGGTATAATGCCCGTAAACGTGTTATATTAAACTGG
CTGCTGTTGATTTACCTGAAGTTACTTCTTTAGAAAGGATGTAAAGGGGATTGAAGTCAC
TTATGCAAAGAGCTTTGAGGGTGATATCTTCATCTACTTGTGTTTTCTATATATTGCTTT
CCTTATTAGTTGTCATGTTTTCTTCACTGTTGT