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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g099780.2.1
CDS Infomation

RPM1-interacting protein 4 (RIN4) family protein (AHRD V3.3 *-* AT5G19473.1)
Sequence

ATGGAAAATCGAAAGGAGAGAAATGGTCCAAGAAAAGTGCCTCAATTTGGAGCATGGGAT
AACAATGGTGGGGATGGAGGAAATGCTGGTTACACTGTGGAGTTCTCAAAAGCTCGTGCC
AACAAACAACATCAACCTAAAAACGGTTTAGACGTACGTCACGAGTTGAAAAATGACAAG
GAACTAAACCACCATCATGAACATAAACAGAGCTTAGACACACGTCATGGGTTGAAGAAC
GATAAGGAAATTCAGCATCATGAACATAAACAGGGCTTAGACGCTCGTCATGGTCATGGG
TTGAAAAACAACAATAAGGATATTCAGAATCATGAGTATAAACATGGTTTAGACGCACAT
CATGGTTATGGGATGAAAAACAACAATAAGGAAATTCAGCATCATGAGAATAAACATGGT
TTAGACGCACATCACGGTCATGGGTTGAAAAACAACAATAAGGAAATTCAGCATCATGAG
AATAAACATGGTGTAGACGCACATCACGGTCATGGGTTGAAAAACAATAATAAGGAAATT
CAGCATCATGAAAATAAACATGGTTCAGAAGCACATCACGGTCATGGGTTGAAAAACAAC
AATAAAGAAATTCAGCATCATGAGCATAAACATGGTTCAGACGCACATCACAGTCATGGC
TTGAAAAACAACAATAAGGAAATTCAGCATCATGAACATAAACATGGTTTAGACACACGT
CATGGGTTGAAAAACGACAAGGAACCTATGCATCAACAACACAAAAATGGTTTACGCACA
CGCCATGGGTTAGAAAATAATCAGGAATTTCAACATCAACCGTATAAAAATGGTTTAGGC
CCACGTCACGGGTTGACAAATGATCAGGAATTTCCTGGCAAGAAACAAGAGGACCCCAAT
ATGAAAAATGGATACAGGTCTGTTCCTCAATTTGGAATGTGGGATCAACAAGCAACTGGA
GGTGGTGCAGCAGCCAGTTACACAGTAGAATTTTCGAAGGCTCGCGTCAACAGGAAACAA
CACAAAAATAATGATCTTTTAGCACGACCACCTAGCATCGATCACGAGCAGGAAGATCTT
AGGAAGCAGCAAGAGGATGCTTGCATGAGGAAAAAGAATATGTTGACATACCTCAATTGT
TGCATTAGGCCTTGA

Peptide Sequence

PEP ID

Solyc12g099780.2.1
PEP Infomation

RPM1-interacting protein 4 (RIN4) family protein (AHRD V3.3 *-* AT5G19473.1)
Sequence

MENRKERNGPRKVPQFGAWDNNGGDGGNAGYTVEFSKARANKQHQPKNGLDVRHELKNDK
ELNHHHEHKQSLDTRHGLKNDKEIQHHEHKQGLDARHGHGLKNNNKDIQNHEYKHGLDAH
HGYGMKNNNKEIQHHENKHGLDAHHGHGLKNNNKEIQHHENKHGVDAHHGHGLKNNNKEI
QHHENKHGSEAHHGHGLKNNNKEIQHHEHKHGSDAHHSHGLKNNNKEIQHHEHKHGLDTR
HGLKNDKEPMHQQHKNGLRTRHGLENNQEFQHQPYKNGLGPRHGLTNDQEFPGKKQEDPN
MKNGYRSVPQFGMWDQQATGGGAAASYTVEFSKARVNRKQHKNNDLLARPPSIDHEQEDL
RKQQEDACMRKKNMLTYLNCCIRP*

Transcript Sequence

Transcript ID

Solyc12g099780.2.1
Transcript Infomation

RPM1-interacting protein 4 (RIN4) family protein (AHRD V3.3 *-* AT5G19473.1)
Sequence

TATATAGAATCCATTACAAGCTCCTTCAAAGCTTTTTTTTTTTTCATCATTTCTCTCCTG
TGACTTTTCCTCTTTGTGCTTCATGGAAAATCGAAAGGAGAGAAATGGTCCAAGAAAAGT
GCCTCAATTTGGAGCATGGGATAACAATGGTGGGGATGGAGGAAATGCTGGTTACACTGT
GGAGTTCTCAAAAGCTCGTGCCAACAAACAACATCAACCTAAAAACGGTTTAGACGTACG
TCACGAGTTGAAAAATGACAAGGAACTAAACCACCATCATGAACATAAACAGAGCTTAGA
CACACGTCATGGGTTGAAGAACGATAAGGAAATTCAGCATCATGAACATAAACAGGGCTT
AGACGCTCGTCATGGTCATGGGTTGAAAAACAACAATAAGGATATTCAGAATCATGAGTA
TAAACATGGTTTAGACGCACATCATGGTTATGGGATGAAAAACAACAATAAGGAAATTCA
GCATCATGAGAATAAACATGGTTTAGACGCACATCACGGTCATGGGTTGAAAAACAACAA
TAAGGAAATTCAGCATCATGAGAATAAACATGGTGTAGACGCACATCACGGTCATGGGTT
GAAAAACAATAATAAGGAAATTCAGCATCATGAAAATAAACATGGTTCAGAAGCACATCA
CGGTCATGGGTTGAAAAACAACAATAAAGAAATTCAGCATCATGAGCATAAACATGGTTC
AGACGCACATCACAGTCATGGCTTGAAAAACAACAATAAGGAAATTCAGCATCATGAACA
TAAACATGGTTTAGACACACGTCATGGGTTGAAAAACGACAAGGAACCTATGCATCAACA
ACACAAAAATGGTTTACGCACACGCCATGGGTTAGAAAATAATCAGGAATTTCAACATCA
ACCGTATAAAAATGGTTTAGGCCCACGTCACGGGTTGACAAATGATCAGGAATTTCCTGG
CAAGAAACAAGAGGACCCCAATATGAAAAATGGATACAGGTCTGTTCCTCAATTTGGAAT
GTGGGATCAACAAGCAACTGGAGGTGGTGCAGCAGCCAGTTACACAGTAGAATTTTCGAA
GGCTCGCGTCAACAGGAAACAACACAAAAATAATGATCTTTTAGCACGACCACCTAGCAT
CGATCACGAGCAGGAAGATCTTAGGAAGCAGCAAGAGGATGCTTGCATGAGGAAAAAGAA
TATGTTGACATACCTCAATTGTTGCATTAGGCCTTGATCATTTCCAAATGTCCAAGTGAA
AAGCCTCATTTTGTAATAGTCTTGAAAGTTGCTATATATGCAAATGAACCTCACACTTTT
TGTTTTCTTGAGAAATATTCTAATATTATTTCTGGAATCTATTAAAATTTTTCTGAAAAA
AAAAATAGTC