Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g099760.2.1
CDS Infomation

Homeobox leucine zipper protein (AHRD V3.3 *** G7K365_MEDTR)
Sequence

ATGGAAGATTCACATGAAATACATTCTGAAGATGATAAAGGTCATGTTGGGAAACTCAAG
GCAAGAATAATGAAGACACCTGCACAACTTGAAGGTCTTGAGAAATTCTATCAGGAGCAT
AAGTATCCTACAGAGTCAATGAAATTGGAGGTGGCACAGTCATTGGGATTAACAGAAAAG
CAGGTTTCTGGGTGGTTTTGTCATAGGCGGTTGAAAGACAAGAGGCTATCGAGTCGGGAA
ACAAATGCAAAAGGAAGACAAGATCGTTCAAGCGGTGTCATTCAGGACCGTGGCAGCGGT
TTTAGACAGGATTCTTGTGGAAGTACTAAGCAAGGAGATGATAAATATTTTGATCATCGG
GAAGTTGAGAGTAGAAGATTAACTGGGCCAGAAGTCTCAACTGCGGATGTGACGCGTGAA
GCTGACACTAGGTATAGAGCAGAGTCTAACCTCATGGAGGACACACCTTCAGGAAGTAGC
TCTTCCTTACGTGATGCACGTTTTTCACAAAACGTAGAATCATTTGATATGGCAACTTCA
AGATACCTACCAGGTAATGAACCTACTGATCTCAAGTGTGTGAAACCAAGGACTGGCCCA
TCAGGGTATCTAAAAGTGAAAGCAAAGGTAGAAAATGCTTCAATTACTGCTGTGAAGAGG
CAATTGGGAAGTCTCTACCGCCAGGATGGTCCACTACTTGGTGTAGTATTTGACCAGCTT
CCACAGGGTGCTTTTGAATCATCAGTGCAAACTCCTGTTGACGACCCTATATATTCTGGA
GAACCTGTTCCAGATCTTACACCAGATTTCACTAAAGTCGACAAGCGATCCAATTCATGC
ATAGGGTATGGATCCATTTCCAAGATAAACTCTCATGGCTCTGATTTGGATGGTGCAAAC
TTAAAAAAGTCAAACAAGTCTTCTCATCCTGAATATTACATCAACCAAAAGCCTGATCGG
AATTCCTCTATGCACAATGGTGATCGGTACTATCTTGGGCGGAACTCGTCGATAGAGATG
CGCAAAGATTCTGGAAGAGAAGTGGCAGTTGATGGCAGATGCAACTATAAGCTTATGGCT
AAACATGATGGTGCAGCCAATCCTGGCTCTAGTGGTGGTTTTCAAAGTTCCTACATTGGA
AAAGTCAACAGGGAGCAGGTGACTGCTAGGTTCACTAGCCGTGATGGCTTGAGCCTTGAC
ATTGCGGAGGAGGAAGATCTTCAATGCAAGCCTTCAAATTTTGTCCATAAGGGAAGTAAG
CAACATTATTGTCCAGAGAGAGAGCTCTCCAGTACAGTTGAAAAGGATTACATCCATGTG
GACCGACCAACCGTTGATGAAGATTATAATGAAGATCATGTGAAGATACAGTGGGAGAAG
GAAATGAGGGTTGCCAAAAGAGCAACGGATGAGGAAGCTCCTAACCATCAAGAGTATGTG
AGGAAAGCATCAGTGACTAGAATGCCATCCCAGACAAATCATCAGATAAGTTTTGCTGCA
GAGATGTCATCTAGCTTTAGTGAAGATGACAAAACAGAAGAAACCAGTTCTTTTGAGGAT
TGA

Peptide Sequence

PEP ID

Solyc12g099760.2.1
PEP Infomation

Homeobox leucine zipper protein (AHRD V3.3 *** G7K365_MEDTR)
Sequence

MEDSHEIHSEDDKGHVGKLKARIMKTPAQLEGLEKFYQEHKYPTESMKLEVAQSLGLTEK
QVSGWFCHRRLKDKRLSSRETNAKGRQDRSSGVIQDRGSGFRQDSCGSTKQGDDKYFDHR
EVESRRLTGPEVSTADVTREADTRYRAESNLMEDTPSGSSSSLRDARFSQNVESFDMATS
RYLPGNEPTDLKCVKPRTGPSGYLKVKAKVENASITAVKRQLGSLYRQDGPLLGVVFDQL
PQGAFESSVQTPVDDPIYSGEPVPDLTPDFTKVDKRSNSCIGYGSISKINSHGSDLDGAN
LKKSNKSSHPEYYINQKPDRNSSMHNGDRYYLGRNSSIEMRKDSGREVAVDGRCNYKLMA
KHDGAANPGSSGGFQSSYIGKVNREQVTARFTSRDGLSLDIAEEEDLQCKPSNFVHKGSK
QHYCPERELSSTVEKDYIHVDRPTVDEDYNEDHVKIQWEKEMRVAKRATDEEAPNHQEYV
RKASVTRMPSQTNHQISFAAEMSSSFSEDDKTEETSSFED*

Transcript Sequence

Transcript ID

Solyc12g099760.2.1
Transcript Infomation

Homeobox leucine zipper protein (AHRD V3.3 *** G7K365_MEDTR)
Sequence

AATTTCGGAAAAAAAAACACACATACATGACATCATTCGAATATATAAAACATAGAGAGT
TAAAATACTCTTCAAGATACCCAAATCTCTTCAACTCTCTCCCCTATAGTTTTTGTATTC
TTCCCCTCTTTAGTTCACCAAATTTCTTCCCTTTTTTGCTTCCTGAAATTAGTAATCAGT
GCGATATGCACAAAGGGGCGCTTCAATCTTCGCATTCTCCGCTGATTTGGGGTTCGAATT
TTGAGTTAATAAGTAAAAGGGGTTAACGAAAAACCCAGAGAAATTTGACGAGAGATCATG
GAAGATTCACATGAAATACATTCTGAAGATGATAAAGGTCATGTTGGGAAACTCAAGGCA
AGAATAATGAAGACACCTGCACAACTTGAAGGTCTTGAGAAATTCTATCAGGAGCATAAG
TATCCTACAGAGTCAATGAAATTGGAGGTGGCACAGTCATTGGGATTAACAGAAAAGCAG
GTTTCTGGGTGGTTTTGTCATAGGCGGTTGAAAGACAAGAGGCTATCGAGTCGGGAAACA
AATGCAAAAGGAAGACAAGATCGTTCAAGCGGTGTCATTCAGGACCGTGGCAGCGGTTTT
AGACAGGATTCTTGTGGAAGTACTAAGCAAGGAGATGATAAATATTTTGATCATCGGGAA
GTTGAGAGTAGAAGATTAACTGGGCCAGAAGTCTCAACTGCGGATGTGACGCGTGAAGCT
GACACTAGGTATAGAGCAGAGTCTAACCTCATGGAGGACACACCTTCAGGAAGTAGCTCT
TCCTTACGTGATGCACGTTTTTCACAAAACGTAGAATCATTTGATATGGCAACTTCAAGA
TACCTACCAGGTAATGAACCTACTGATCTCAAGTGTGTGAAACCAAGGACTGGCCCATCA
GGGTATCTAAAAGTGAAAGCAAAGGTAGAAAATGCTTCAATTACTGCTGTGAAGAGGCAA
TTGGGAAGTCTCTACCGCCAGGATGGTCCACTACTTGGTGTAGTATTTGACCAGCTTCCA
CAGGGTGCTTTTGAATCATCAGTGCAAACTCCTGTTGACGACCCTATATATTCTGGAGAA
CCTGTTCCAGATCTTACACCAGATTTCACTAAAGTCGACAAGCGATCCAATTCATGCATA
GGGTATGGATCCATTTCCAAGATAAACTCTCATGGCTCTGATTTGGATGGTGCAAACTTA
AAAAAGTCAAACAAGTCTTCTCATCCTGAATATTACATCAACCAAAAGCCTGATCGGAAT
TCCTCTATGCACAATGGTGATCGGTACTATCTTGGGCGGAACTCGTCGATAGAGATGCGC
AAAGATTCTGGAAGAGAAGTGGCAGTTGATGGCAGATGCAACTATAAGCTTATGGCTAAA
CATGATGGTGCAGCCAATCCTGGCTCTAGTGGTGGTTTTCAAAGTTCCTACATTGGAAAA
GTCAACAGGGAGCAGGTGACTGCTAGGTTCACTAGCCGTGATGGCTTGAGCCTTGACATT
GCGGAGGAGGAAGATCTTCAATGCAAGCCTTCAAATTTTGTCCATAAGGGAAGTAAGCAA
CATTATTGTCCAGAGAGAGAGCTCTCCAGTACAGTTGAAAAGGATTACATCCATGTGGAC
CGACCAACCGTTGATGAAGATTATAATGAAGATCATGTGAAGATACAGTGGGAGAAGGAA
ATGAGGGTTGCCAAAAGAGCAACGGATGAGGAAGCTCCTAACCATCAAGAGTATGTGAGG
AAAGCATCAGTGACTAGAATGCCATCCCAGACAAATCATCAGATAAGTTTTGCTGCAGAG
ATGTCATCTAGCTTTAGTGAAGATGACAAAACAGAAGAAACCAGTTCTTTTGAGGATTGA
GAGATTTACAGTTTCCAGAGAAAAGTTAAAAAGTGCAGAAGCTGTAGTGATTCTTGAATT
CCTATTTGTTGATAGCTTAAGTTACTTTGGATTTGTACAGTTCAAAACAACTTATAATGC
TCTCATCAGTACACCAGCATGTGAAATTGAACAACTTTGGTCTCTGTACAGTAAAAGTAG
TAGTACTTTTTTTTAAAATGTAGTAGCTGGATGCTGAAATTAGAAGAATATTGAATTTTA
TATTGACATTTAAGCTTTAGATTCAATGAGAAATTGATCAAAATAAACCT