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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g099580.2.1
CDS Infomation

WAT1-related protein (AHRD V3.3 *** K4DHX9_SOLLC)
Sequence

ATGAAGAGCTATGTGGAATGGTATCCTATCATTATTATGTTGGCGGTAGATTTTGCTTTA
TCGATTTGTAATATACTTCTCAAGAAGATTATCATGGATGGTATGAACCATTTCGTGTTC
ATCACTTATCGACAGTCCATTTCAACCGTGTTTTTAGCCCCAATCGCCTTCTTTCTTGAA
AGGAATAAAAGGCCTAAACTCACCCTTCAAATCTTGTGCTATCTTTTCTTGAGTGCAATC
GTTGGTGCATCGCTTACACAATACTTATTCCTTCTTGGCATACAATACACTTCTGCAACA
TTTGCATGTGCATTTCTCAACATGGTACCAGTGGTAACATTCCTTATGGCATTACTTTTC
GGGTTAGAGACAACTAACATGAAAGATAGAAGTGGAAGAGCCAAAGTTATTGGTACATTA
ATATGCCTTGGAGGTGCCTTTTTACTGACTTTTTACAAAGGCAAACCTTTAATCAATTTT
TCACACTTAAAAGATTTATCTCAAACTTTGGAAGAACCTATCAGCTCCTCTAAAAGAAAT
GTACAATGGATATTTGGCTCGATGATCTTATTCGCTGGAACTATTTTATGGTCTTCGTGG
TTCCTTATTCAAGCGAAAATTGGGAAGAAATATCCATGTCAGTACTCGAGCACGGTTATT
ATGACCTTTTTCAGTGCCATACAATCAGCTATCTTAACTTTTTCCACTGATAGAACACTT
TCCATTTGGATTCCAAAGGAGAAGATCATCGACATGTTGAGTGTCGTTTATACTGGCTTA
ATAGGCTCAGGACTATGCTTTGTTGGAATGTCGTGGTGTGTTAAGAAGAGGGGACCGGTC
TTTACTGCAGCATTCAGTCCTCTTATACAAGTTATGGCAGCCATGTTAGACGTTCCAATT
CTACACGAACAACTCCATCTCGGAAGTGTGGTGGGATCAGTTATTGTAATCGTCGGACTA
TACTTTTTACTATGGGGCAAGAATAAAGAAATGCAGAAAGTTTCTCAAGAAACTGAAGAG
AAAAAGGAAAAAGAGTTAAATTTCCAAGTTCATGAAGCTAATGATGAACCAGAAATACCT
TGA

Peptide Sequence

PEP ID

Solyc12g099580.2.1
PEP Infomation

WAT1-related protein (AHRD V3.3 *** K4DHX9_SOLLC)
Sequence

MKSYVEWYPIIIMLAVDFALSICNILLKKIIMDGMNHFVFITYRQSISTVFLAPIAFFLE
RNKRPKLTLQILCYLFLSAIVGASLTQYLFLLGIQYTSATFACAFLNMVPVVTFLMALLF
GLETTNMKDRSGRAKVIGTLICLGGAFLLTFYKGKPLINFSHLKDLSQTLEEPISSSKRN
VQWIFGSMILFAGTILWSSWFLIQAKIGKKYPCQYSSTVIMTFFSAIQSAILTFSTDRTL
SIWIPKEKIIDMLSVVYTGLIGSGLCFVGMSWCVKKRGPVFTAAFSPLIQVMAAMLDVPI
LHEQLHLGSVVGSVIVIVGLYFLLWGKNKEMQKVSQETEEKKEKELNFQVHEANDEPEIP
*

Transcript Sequence

Transcript ID

Solyc12g099580.2.1
Transcript Infomation

WAT1-related protein (AHRD V3.3 *** K4DHX9_SOLLC)
Sequence

TTGTGCACTTATATGATTCTAATATAGTTAACACAGTAAAGTATCAATGAAAAGTAAGGG
AAAAAAGGGAAATAGTGAAATTTCTCAAGTAAAAAGAAAGAGTATACTTATGTTAAACAA
ATGTCAAAATCTGTTGAGAGTTGCTAAATTGATGTGATTGCCAGAATTCCATCTGTCTTC
TCTTCACACTCTTTTTTAGTCCTAAAAACAGACTTTAAATATCTGTCCTTTGCTTCATTT
TCATCATAAAAACACAGAGTAGTTAAATTCACTTAAAAGATGAAGAGCTATGTGGAATGG
TATCCTATCATTATTATGTTGGCGGTAGATTTTGCTTTATCGATTTGTAATATACTTCTC
AAGAAGATTATCATGGATGGTATGAACCATTTCGTGTTCATCACTTATCGACAGTCCATT
TCAACCGTGTTTTTAGCCCCAATCGCCTTCTTTCTTGAAAGGAATAAAAGGCCTAAACTC
ACCCTTCAAATCTTGTGCTATCTTTTCTTGAGTGCAATCGTTGGTGCATCGCTTACACAA
TACTTATTCCTTCTTGGCATACAATACACTTCTGCAACATTTGCATGTGCATTTCTCAAC
ATGGTACCAGTGGTAACATTCCTTATGGCATTACTTTTCGGGTTAGAGACAACTAACATG
AAAGATAGAAGTGGAAGAGCCAAAGTTATTGGTACATTAATATGCCTTGGAGGTGCCTTT
TTACTGACTTTTTACAAAGGCAAACCTTTAATCAATTTTTCACACTTAAAAGATTTATCT
CAAACTTTGGAAGAACCTATCAGCTCCTCTAAAAGAAATGTACAATGGATATTTGGCTCG
ATGATCTTATTCGCTGGAACTATTTTATGGTCTTCGTGGTTCCTTATTCAAGCGAAAATT
GGGAAGAAATATCCATGTCAGTACTCGAGCACGGTTATTATGACCTTTTTCAGTGCCATA
CAATCAGCTATCTTAACTTTTTCCACTGATAGAACACTTTCCATTTGGATTCCAAAGGAG
AAGATCATCGACATGTTGAGTGTCGTTTATACTGGCTTAATAGGCTCAGGACTATGCTTT
GTTGGAATGTCGTGGTGTGTTAAGAAGAGGGGACCGGTCTTTACTGCAGCATTCAGTCCT
CTTATACAAGTTATGGCAGCCATGTTAGACGTTCCAATTCTACACGAACAACTCCATCTC
GGAAGTGTGGTGGGATCAGTTATTGTAATCGTCGGACTATACTTTTTACTATGGGGCAAG
AATAAAGAAATGCAGAAAGTTTCTCAAGAAACTGAAGAGAAAAAGGAAAAAGAGTTAAAT
TTCCAAGTTCATGAAGCTAATGATGAACCAGAAATACCTTGATATCAGTATTTCAATCTT
TTCTTTGAACCAAGTTTCTTTTCTTTTTTCGCGAAAAAAAAAATGTAACTTTTGTTCAGT
AAGAAAAAAGTTTGAGAAACTGTCAATTACAATGTTCAAGAATCAAAAATCTATACCTTA
ATTGGATGTACATAAAAGATTCTTGCACATAAAAAAGATTTATATAGTAGCAAGTTGTAA
TTATCATTTTGAAAAAATACACATACAATATGCTAGCTGCATTTGTAGTACTT