Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g099530.2.1
CDS Infomation

Ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** A0A0B0MXS6_GOSAR)
Sequence

ATGGGAGCGTTAACGAGCAACAGGAAGCGAGGTAATGATTTCTTCTCTTCGAACAGCAAA
ACCCCACTTTCAAATTTGTCGAAAAAGCTCAAACTTTCAGCCCTAAATCCACCATTAGCA
AGTAAATCAACTGTAGAAAGGTTTTTCAAGTACCCAGATCCGATAAACCCAATTGGAAGA
GAGGTTCATGCTCCTTGTAGGAAATTGAGATTTGGGTCGAAGCAAACGAAGTCGAACATT
TTGAATTATAAGGGTGTTTTGGAGTATTCAGGTTCTGAAATGGGTAATTGTCTGTCGAGA
AAGCATGAGGAAACTAAAAGAGGTGATTTTTATGGTTTGAAGAAAGATATTGAAGTGATA
GATATTGATGGTGATGATGCTAAAGAGGGGGGTTCTGAGGATTCGAGTATTGAGGAAGTG
GTAGTTTGGGGTTGTAAAAAAAGTGATTTAGATATTGCTGCTGCTGCTAATGGTTTGGAG
GATTCGAGTATCGAGGAATTGGAAAGACGGGGTTGTGAAAAGAGTGATTTTTTGGGTCAG
GAGGTTGATGATGATGTGAAGATTTTGGATGGTTATGACGGTAAGGATTCATCCGTGTTA
GCTACGGGTTTGGATGATGAAAATTTGAAGGAAGAGAGTGTGGTAAAGATGATAGACTCA
TTAGCTATGAACCCCAAGTCAGATTCCTACTTCTATGTCCCTTTGTATAGGAAACTTCTT
GGTTCAGTCGGGAAAATAAGTGATAAGCTGAAACGATTACAGTTCCAGATAGAATTGAAT
GAGAAGAGTCTCGAAACGAATAGGTTGTTGCGGCCTCAAAAGAAAGAAGAACAGGATGCG
ATTTCAGAGCCATTTGTGCCTCTAACTGAAAAGGAACATGATGAGGTTACTTGTGCTTTA
TCGAAATCCAATCGGAGAAAGGTTTTGGTAACCCATAAAAGCTCCAATATTGATATTACT
GGAGAAATATTGCAATGTTTGAGACCTGGGGCATGGTTGAATGACGAGGTTATCAATGTA
TATCTTGAACTGTTGAAGGAGAGAGAGAAAAGGGAGCCACAGAAGTTTTTGAAATGTCAT
TTCTTTAACACATTCTTTTACAAGAAGTTGACAAGTGGCACGGGAGGCTATAACTATCAA
TCTGTGAGAAGATGGACATCCCAAAGAAAGCTGGGTTACTCCCTCCTTGAGTGCGATAAA
ATATTTGTCCCTATCCACAAAGAAATACATTGGTGTTTAGCTGTTATCAATAAAAAGGAT
CAGAAGTTCCAATATCTTGATTCACTCAGAGGAAAGGATAGAAATGTGCTGAAAGTGCTG
GCTACTTACTTTGTTGATGAGGTAAAGGACAAGAGTGGGAAATACATTGATGTTAGTTCG
TGGATGGAAGAGTTTGTTGAGGACCTTCCAGAGCAAAAGAATGGGTACGACTGCGGTGTG
TTTATGATAAAAAATGTGGATTTCTACAGCAGAGATATAGGACTCTGTTTTAATCAGGGA
GACATGCCATATTTTAGGATGAGGACTGCCAAGGAGCTGTTAAGGTTGAAAGCAGATTAA

Peptide Sequence

PEP ID

Solyc12g099530.2.1
PEP Infomation

Ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** A0A0B0MXS6_GOSAR)
Sequence

MGALTSNRKRGNDFFSSNSKTPLSNLSKKLKLSALNPPLASKSTVERFFKYPDPINPIGR
EVHAPCRKLRFGSKQTKSNILNYKGVLEYSGSEMGNCLSRKHEETKRGDFYGLKKDIEVI
DIDGDDAKEGGSEDSSIEEVVVWGCKKSDLDIAAAANGLEDSSIEELERRGCEKSDFLGQ
EVDDDVKILDGYDGKDSSVLATGLDDENLKEESVVKMIDSLAMNPKSDSYFYVPLYRKLL
GSVGKISDKLKRLQFQIELNEKSLETNRLLRPQKKEEQDAISEPFVPLTEKEHDEVTCAL
SKSNRRKVLVTHKSSNIDITGEILQCLRPGAWLNDEVINVYLELLKEREKREPQKFLKCH
FFNTFFYKKLTSGTGGYNYQSVRRWTSQRKLGYSLLECDKIFVPIHKEIHWCLAVINKKD
QKFQYLDSLRGKDRNVLKVLATYFVDEVKDKSGKYIDVSSWMEEFVEDLPEQKNGYDCGV
FMIKNVDFYSRDIGLCFNQGDMPYFRMRTAKELLRLKAD*

Transcript Sequence

Transcript ID

Solyc12g099530.2.1
Transcript Infomation

Ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** A0A0B0MXS6_GOSAR)
Sequence

CGTAATGCAAGTCAACGGACACAACTTTCTAACCTGTCAGGAGATAATTTAACTCCGAGA
AGTGACACACGCATAGACATCGATATTTCTTTTGAAATCAACATAAAAAAATTATATGTA
AATGAATTTATTTCTCATATTAACTTACATAATTCATGTCAATGGACACTACCTACTAAC
CAGCCGGAAGATAATTCAACTCTAAAAAATGACACATGCATAGATATCGATATTTCTTTT
GAAATCAACATAAAGAATTATATGATTAATTCATGTTCATCAAAAAAAAAAAGAACTCAA
AAATTGATTCAACTCTTAGAAATTACACACATAGATATCGATATTTTTTAAAAAACAAAC
ACAAAAAACTACATGATTAATTTTCACCACTATTAATAAAAATATATCAAAAACTCCAAA
AGAGAGAAGAAGAAAAGCCCTTCCCCCCCAAATCAGAAGATTTCACTCAATTTTTGTTCA
AACTCTACATTAGCGGTGTTTTGATGATTTCTGAGCAAATTGAAGAATTTCTACTTCAAT
GGGAGCGTTAACGAGCAACAGGAAGCGAGGTAATGATTTCTTCTCTTCGAACAGCAAAAC
CCCACTTTCAAATTTGTCGAAAAAGCTCAAACTTTCAGCCCTAAATCCACCATTAGCAAG
TAAATCAACTGTAGAAAGGTTTTTCAAGTACCCAGATCCGATAAACCCAATTGGAAGAGA
GGTTCATGCTCCTTGTAGGAAATTGAGATTTGGGTCGAAGCAAACGAAGTCGAACATTTT
GAATTATAAGGGTGTTTTGGAGTATTCAGGTTCTGAAATGGGTAATTGTCTGTCGAGAAA
GCATGAGGAAACTAAAAGAGGTGATTTTTATGGTTTGAAGAAAGATATTGAAGTGATAGA
TATTGATGGTGATGATGCTAAAGAGGGGGGTTCTGAGGATTCGAGTATTGAGGAAGTGGT
AGTTTGGGGTTGTAAAAAAAGTGATTTAGATATTGCTGCTGCTGCTAATGGTTTGGAGGA
TTCGAGTATCGAGGAATTGGAAAGACGGGGTTGTGAAAAGAGTGATTTTTTGGGTCAGGA
GGTTGATGATGATGTGAAGATTTTGGATGGTTATGACGGTAAGGATTCATCCGTGTTAGC
TACGGGTTTGGATGATGAAAATTTGAAGGAAGAGAGTGTGGTAAAGATGATAGACTCATT
AGCTATGAACCCCAAGTCAGATTCCTACTTCTATGTCCCTTTGTATAGGAAACTTCTTGG
TTCAGTCGGGAAAATAAGTGATAAGCTGAAACGATTACAGTTCCAGATAGAATTGAATGA
GAAGAGTCTCGAAACGAATAGGTTGTTGCGGCCTCAAAAGAAAGAAGAACAGGATGCGAT
TTCAGAGCCATTTGTGCCTCTAACTGAAAAGGAACATGATGAGGTTACTTGTGCTTTATC
GAAATCCAATCGGAGAAAGGTTTTGGTAACCCATAAAAGCTCCAATATTGATATTACTGG
AGAAATATTGCAATGTTTGAGACCTGGGGCATGGTTGAATGACGAGGTTATCAATGTATA
TCTTGAACTGTTGAAGGAGAGAGAGAAAAGGGAGCCACAGAAGTTTTTGAAATGTCATTT
CTTTAACACATTCTTTTACAAGAAGTTGACAAGTGGCACGGGAGGCTATAACTATCAATC
TGTGAGAAGATGGACATCCCAAAGAAAGCTGGGTTACTCCCTCCTTGAGTGCGATAAAAT
ATTTGTCCCTATCCACAAAGAAATACATTGGTGTTTAGCTGTTATCAATAAAAAGGATCA
GAAGTTCCAATATCTTGATTCACTCAGAGGAAAGGATAGAAATGTGCTGAAAGTGCTGGC
TACTTACTTTGTTGATGAGGTAAAGGACAAGAGTGGGAAATACATTGATGTTAGTTCGTG
GATGGAAGAGTTTGTTGAGGACCTTCCAGAGCAAAAGAATGGGTACGACTGCGGTGTGTT
TATGATAAAAAATGTGGATTTCTACAGCAGAGATATAGGACTCTGTTTTAATCAGGGAGA
CATGCCATATTTTAGGATGAGGACTGCCAAGGAGCTGTTAAGGTTGAAAGCAGATTAAAC
TAAGTTGCGTTGACTCTTTACTTTTAATGCTGCAGCCGTGTCAGATTCTCCAAAATACAT
TAAGTTTCGACAAAGGAATAGTTATATAGTTCAATAGTTAGTCAACGCGAAGCCAACTAT
TTCGCGAAGACCTTTATAGTATGATTTTGTCAGTATATGATGTAACTAGAAAAACTTGAT
TTTGTACGTTAGAGTTTGGAACTGCTTCTTTAGCATGATCTCATTAATCTTGTAGAGCAT
TCAAATTTTACTCGGTTTGAATGAATTTTTGAGTTTTAAACATGCGTGATTCTTTCTC