Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g099280.2.1
CDS Infomation	Pre-mRNA polyadenylation factor Fip1 (AHRD V3.3 - A0A103XT69_CYNCS)
Sequence	ATGGTGAACATCGCCGGCGACGACGACGATGATTTCGGCGATCTCTACGCCGACGTTGAA GTTCAAGCAAGTTCAGCAATCAATGCTCTACAGAGTTCAATGCTGGTTCAAACGGAAGTC AATGAGGTTGACTACAATGCTTCCGTCGGAAACTGTAATCGTGAAAATGCTGTAAGAGGA GAAGAGGATCGTGAGAGCGAAAGTGGAGATGACTTGAACATACTGTTGAATGATGATGAA GGTGATGATGATTTTCTCAATGCTGGATGTGATGAGGATGAAATTGAGGGAAATGGAGGT TTTATTGTTAGTGATAAAGGAAATGGTTTAGGACAGAATTCAAATGGCAGCGGAAGTGGC GATGGAGAGAAAAACAGTTACAAGAACACACGACCACCACAAGCAGCATATTCTAATCAT CTCAAAGCCAATGGATCTTCTTGTGCGCCTTCTTACTGTACAACATTTGTCAAGGGCAAC TGGGAGGATAATAGCTACACACAAAGGGTGGGCTCAAGCTTTGCTGCTCAAAATGGACAG AGCTTCTCACTTCCTCGATCAAGGAATATCTTGGACGTGAATATTGATATGTTTGAGAAG AAACCTTGGCGGTATCCAGGCTCTGACTTGACAGATTATTTTAATTTTGGCTTTGATGAA GATAGTTGGAAACAGTATTGCAACTGCCTGGATGAGCACCGAGAACAAGCAAAAAAGGTA TTCAAGGAGTCAGACTACAAGACTCCGAAAATTAGTAAGCCAAAAGGTAGAGAAATAGAG GTGGAAGAGAGCATGATTGAGCGCCTACCATCAACAGATGTGGAGCGTCCACAATATCGG GATTCTAGTGTTGTCATACAGATTGCTTTGCAGCAGTCAATGGAAGATCCTATAAGTTCT ACAAAAGAGCAGAAGGAAGCATCTGAGAATGGAGATGTTGGGGGAGATAAAAAGGAGTTT CTCTGTTTCAGTAGTGCCTGCGAAGATGAGTTAGCCAGCTTGGAAGGAACTGGAGAAGGA TCAGGCAACTCTACATCTGGAAGGAATACACCTGTTTGTGAGCACGTGTCTATGGGTTCA GATAACTACGAAAATTCCGAGTACTCTGATGCAGATGAGCGACACCACCAAGAGGGGACC TACTGTAATGTTGATCAAACCTCAGGAGCAATTAAGTCTACTCATGATGCAAATAAAAGC AGTGAGAGAGACATATCTGATCCAAGACAACCTATAAAGTTGCAAGAACCACTGTGTGGT GGAGGCAGAGAGCATAGCCCAGGTTCATCTTGTTGTTCTTTAAGTCATGGTGGCACATCT GGAGATGGGACTTTTCTTAACTTGGAGAAATCTCATGATCATCATACAAGGTTAATATCA AACGCAGAATCTGAGTTACGGGAGAAGGGTACAACTGATTACCAGCCAATTTCCAGAACC GATCACAACAGAACAAAGTCTGGTGATTTTAAATATTTTACACAAGGTAGAAGGTCTGTG CAAAGAGATCTGCTGCATGACAGAAGAAGACCTGGTCGAATGGGTGAAACAATTCCTGCT CACCTGAAAGATGAGGATTCCCACAAATCTGATGCTAGGATACTGTATGAAAGGCGTAAT TCATCTGTGATCCGACACAGACAGAGAGATAGACGATATGCTTTCGACTCTCATGAAAGG GAAGATACTTCACATTTTAAGAGGGCAGAACCCTTTTACTCTAATGCAGGACGATTTTCT GATTATCCATGCCGGGGTTCTTTTACAAAAAATCCTCAGATGGAATATCAGTTAAGATGC AGATATGACAAAAACTGGTCTGGCGGTCGAAGTGTGAAAAGAAAGCTAGATCATCTTGAA CTATCAACTTATACAGATGATAAATTGTTGGAAAGAGATAGACCCCATTATGGGGGAAGG CTCACTGTTCAGGATATGGAGAACATTTCTTTTCATGAATCAGAACAATGGATCGATAAG TATATTTCCTATTCAGATGATGAGAATCCCAGTCAACGTATTCGGAAAATAGATCAGCTG CCGAAAAAGAAGAGAGTGAGGACTGATGATCTTGTAACTGAATGTAATTACATCTACGAT ATCATGGAAGAGACCGATAACAGATATAGACCATACAACCACAGGGATACTGATATTCTA GAAGATGGCTATGATGTAAATTTGACTTATTTCAGAAGAGAAATTAAAAGCCCCAGTAGG GGCCAAAGGAGAGATATCAGTCCTTGCAAAAGTTCAAATGATATATGCTTCATGGATCTA AAGGATATGGGAGGGAGATTTGATGGGTATCGACCTTCATCCTTTTGTTTGTATAGAGAA TCTTGTACTTCTAGCAGAAGGTGGCAGAGCCTTGAACTGCCACGTGGCAGAAACAGAATA TTCAGTGGGACCAGGAAATGTGATGGTGGTCAGTTTGCTAGTTTGACCAACTCCATCGGT GCCAATCAGACAATCAAGTATCCTGCTAATCAGGACATTTTTAAAAGAAGAAGAGGGGGC CGGCAGTCTGAAGGGATGCAATGGGTTGAAGATGAAAACAATTCTGGTTATCAGGAAAAT GTATTCGATGCTGAGAGGACGTCATATTCGTTCAGAAGAACTTCAAGTGACAAAAGGTTT AAGTCATTTGACAATAATCATGGGCCCAACCCAGTAGAAAAGCTTTTAGATGACAGGCAT GTGGAGCAGGAAAAATACAAATTGATCAGGGAAGGCAATAATGCCAATCAATTTGGTCAA GGGTCTAAAGTTTTTCATAAAGATAATCATTGGAGGAGATTCCCAAGAGGAAGAGATTCT GTTGACACAGACTTGATTGTTGAGAACGGAGAGTCCTCCGGAAGATGCTCCAAAGCAGGG GGTGTAACATCCTTTGACAGGTATGGCCACTTGGATTCAGATTGTTATTTGAAGCTGAAG CCCGTCGATGGAACTAGCAAACTCCATTTCAGGGAGACACTCAGAACTCGAAATGTGACA ACTGATCCTAAAGAAAATGATAAAGAAAGGCTTGCTATATTCTCAGATGCCAACCAGGAA GAGTCTTTGGATATTGAAGAAGGTCAGATAATTGAAGAAATGAACGAGAAAATCGTTAAA AAGAGAATCACGTATTCTGGAAAATCAGAAATCGGTGAAATGAAGAATTTCGCTACTGGT AAAAATGTGGAGGGACAGGGCAGCCCTAAGATTTTGGAGATCATAGCAAAGATGGAAAAG CGTGGAGAGCGTTTCAAGCAGCCTATTGCTCTCAAAAGTGATACAAAGAATATCTCTACG CCTTTGGTTGATTCGTTTGCTGTGTCGACTGAACCTATGCAACCAAGACCAGCACGAAAG AGGAGATGGGCTGCAAGCAAGGCAACTGTTTAG

Peptide Sequence

PEP ID	Solyc12g099280.2.1
PEP Infomation	Pre-mRNA polyadenylation factor Fip1 (AHRD V3.3 - A0A103XT69_CYNCS)
Sequence	MVNIAGDDDDDFGDLYADVEVQASSAINALQSSMLVQTEVNEVDYNASVGNCNRENAVRG EEDRESESGDDLNILLNDDEGDDDFLNAGCDEDEIEGNGGFIVSDKGNGLGQNSNGSGSG DGEKNSYKNTRPPQAAYSNHLKANGSSCAPSYCTTFVKGNWEDNSYTQRVGSSFAAQNGQ SFSLPRSRNILDVNIDMFEKKPWRYPGSDLTDYFNFGFDEDSWKQYCNCLDEHREQAKKV FKESDYKTPKISKPKGREIEVEESMIERLPSTDVERPQYRDSSVVIQIALQQSMEDPISS TKEQKEASENGDVGGDKKEFLCFSSACEDELASLEGTGEGSGNSTSGRNTPVCEHVSMGS DNYENSEYSDADERHHQEGTYCNVDQTSGAIKSTHDANKSSERDISDPRQPIKLQEPLCG GGREHSPGSSCCSLSHGGTSGDGTFLNLEKSHDHHTRLISNAESELREKGTTDYQPISRT DHNRTKSGDFKYFTQGRRSVQRDLLHDRRRPGRMGETIPAHLKDEDSHKSDARILYERRN SSVIRHRQRDRRYAFDSHEREDTSHFKRAEPFYSNAGRFSDYPCRGSFTKNPQMEYQLRC RYDKNWSGGRSVKRKLDHLELSTYTDDKLLERDRPHYGGRLTVQDMENISFHESEQWIDK YISYSDDENPSQRIRKIDQLPKKKRVRTDDLVTECNYIYDIMEETDNRYRPYNHRDTDIL EDGYDVNLTYFRREIKSPSRGQRRDISPCKSSNDICFMDLKDMGGRFDGYRPSSFCLYRE SCTSSRRWQSLELPRGRNRIFSGTRKCDGGQFASLTNSIGANQTIKYPANQDIFKRRRGG RQSEGMQWVEDENNSGYQENVFDAERTSYSFRRTSSDKRFKSFDNNHGPNPVEKLLDDRH VEQEKYKLIREGNNANQFGQGSKVFHKDNHWRRFPRGRDSVDTDLIVENGESSGRCSKAG GVTSFDRYGHLDSDCYLKLKPVDGTSKLHFRETLRTRNVTTDPKENDKERLAIFSDANQE ESLDIEEGQIIEEMNEKIVKKRITYSGKSEIGEMKNFATGKNVEGQGSPKILEIIAKMEK RGERFKQPIALKSDTKNISTPLVDSFAVSTEPMQPRPARKRRWAASKATV*

Transcript Sequence

Transcript ID	Solyc12g099280.2.1
Transcript Infomation	Pre-mRNA polyadenylation factor Fip1 (AHRD V3.3 - A0A103XT69_CYNCS)
Sequence	AAACTCATGATTATCTCTAAAACCCTGAGCTCACACTTCTACTTGTGTACACTCCAAAAT GGTGAACATCGCCGGCGACGACGACGATGATTTCGGCGATCTCTACGCCGACGTTGAAGT TCAAGCAAGTTCAGCAATCAATGCTCTACAGAGTTCAATGCTGGTTCAAACGGAAGTCAA TGAGGTTGACTACAATGCTTCCGTCGGAAACTGTAATCGTGAAAATGCTGTAAGAGGAGA AGAGGATCGTGAGAGCGAAAGTGGAGATGACTTGAACATACTGTTGAATGATGATGAAGG TGATGATGATTTTCTCAATGCTGGATGTGATGAGGATGAAATTGAGGGAAATGGAGGTTT TATTGTTAGTGATAAAGGAAATGGTTTAGGACAGAATTCAAATGGCAGCGGAAGTGGCGA TGGAGAGAAAAACAGTTACAAGAACACACGACCACCACAAGCAGCATATTCTAATCATCT CAAAGCCAATGGATCTTCTTGTGCGCCTTCTTACTGTACAACATTTGTCAAGGGCAACTG GGAGGATAATAGCTACACACAAAGGGTGGGCTCAAGCTTTGCTGCTCAAAATGGACAGAG CTTCTCACTTCCTCGATCAAGGAATATCTTGGACGTGAATATTGATATGTTTGAGAAGAA ACCTTGGCGGTATCCAGGCTCTGACTTGACAGATTATTTTAATTTTGGCTTTGATGAAGA TAGTTGGAAACAGTATTGCAACTGCCTGGATGAGCACCGAGAACAAGCAAAAAAGGTATT CAAGGAGTCAGACTACAAGACTCCGAAAATTAGTAAGCCAAAAGGTAGAGAAATAGAGGT GGAAGAGAGCATGATTGAGCGCCTACCATCAACAGATGTGGAGCGTCCACAATATCGGGA TTCTAGTGTTGTCATACAGATTGCTTTGCAGCAGTCAATGGAAGATCCTATAAGTTCTAC AAAAGAGCAGAAGGAAGCATCTGAGAATGGAGATGTTGGGGGAGATAAAAAGGAGTTTCT CTGTTTCAGTAGTGCCTGCGAAGATGAGTTAGCCAGCTTGGAAGGAACTGGAGAAGGATC AGGCAACTCTACATCTGGAAGGAATACACCTGTTTGTGAGCACGTGTCTATGGGTTCAGA TAACTACGAAAATTCCGAGTACTCTGATGCAGATGAGCGACACCACCAAGAGGGGACCTA CTGTAATGTTGATCAAACCTCAGGAGCAATTAAGTCTACTCATGATGCAAATAAAAGCAG TGAGAGAGACATATCTGATCCAAGACAACCTATAAAGTTGCAAGAACCACTGTGTGGTGG AGGCAGAGAGCATAGCCCAGGTTCATCTTGTTGTTCTTTAAGTCATGGTGGCACATCTGG AGATGGGACTTTTCTTAACTTGGAGAAATCTCATGATCATCATACAAGGTTAATATCAAA CGCAGAATCTGAGTTACGGGAGAAGGGTACAACTGATTACCAGCCAATTTCCAGAACCGA TCACAACAGAACAAAGTCTGGTGATTTTAAATATTTTACACAAGGTAGAAGGTCTGTGCA AAGAGATCTGCTGCATGACAGAAGAAGACCTGGTCGAATGGGTGAAACAATTCCTGCTCA CCTGAAAGATGAGGATTCCCACAAATCTGATGCTAGGATACTGTATGAAAGGCGTAATTC ATCTGTGATCCGACACAGACAGAGAGATAGACGATATGCTTTCGACTCTCATGAAAGGGA AGATACTTCACATTTTAAGAGGGCAGAACCCTTTTACTCTAATGCAGGACGATTTTCTGA TTATCCATGCCGGGGTTCTTTTACAAAAAATCCTCAGATGGAATATCAGTTAAGATGCAG ATATGACAAAAACTGGTCTGGCGGTCGAAGTGTGAAAAGAAAGCTAGATCATCTTGAACT ATCAACTTATACAGATGATAAATTGTTGGAAAGAGATAGACCCCATTATGGGGGAAGGCT CACTGTTCAGGATATGGAGAACATTTCTTTTCATGAATCAGAACAATGGATCGATAAGTA TATTTCCTATTCAGATGATGAGAATCCCAGTCAACGTATTCGGAAAATAGATCAGCTGCC GAAAAAGAAGAGAGTGAGGACTGATGATCTTGTAACTGAATGTAATTACATCTACGATAT CATGGAAGAGACCGATAACAGATATAGACCATACAACCACAGGGATACTGATATTCTAGA AGATGGCTATGATGTAAATTTGACTTATTTCAGAAGAGAAATTAAAAGCCCCAGTAGGGG CCAAAGGAGAGATATCAGTCCTTGCAAAAGTTCAAATGATATATGCTTCATGGATCTAAA GGATATGGGAGGGAGATTTGATGGGTATCGACCTTCATCCTTTTGTTTGTATAGAGAATC TTGTACTTCTAGCAGAAGGTGGCAGAGCCTTGAACTGCCACGTGGCAGAAACAGAATATT CAGTGGGACCAGGAAATGTGATGGTGGTCAGTTTGCTAGTTTGACCAACTCCATCGGTGC CAATCAGACAATCAAGTATCCTGCTAATCAGGACATTTTTAAAAGAAGAAGAGGGGGCCG GCAGTCTGAAGGGATGCAATGGGTTGAAGATGAAAACAATTCTGGTTATCAGGAAAATGT ATTCGATGCTGAGAGGACGTCATATTCGTTCAGAAGAACTTCAAGTGACAAAAGGTTTAA GTCATTTGACAATAATCATGGGCCCAACCCAGTAGAAAAGCTTTTAGATGACAGGCATGT GGAGCAGGAAAAATACAAATTGATCAGGGAAGGCAATAATGCCAATCAATTTGGTCAAGG GTCTAAAGTTTTTCATAAAGATAATCATTGGAGGAGATTCCCAAGAGGAAGAGATTCTGT TGACACAGACTTGATTGTTGAGAACGGAGAGTCCTCCGGAAGATGCTCCAAAGCAGGGGG TGTAACATCCTTTGACAGGTATGGCCACTTGGATTCAGATTGTTATTTGAAGCTGAAGCC CGTCGATGGAACTAGCAAACTCCATTTCAGGGAGACACTCAGAACTCGAAATGTGACAAC TGATCCTAAAGAAAATGATAAAGAAAGGCTTGCTATATTCTCAGATGCCAACCAGGAAGA GTCTTTGGATATTGAAGAAGGTCAGATAATTGAAGAAATGAACGAGAAAATCGTTAAAAA GAGAATCACGTATTCTGGAAAATCAGAAATCGGTGAAATGAAGAATTTCGCTACTGGTAA AAATGTGGAGGGACAGGGCAGCCCTAAGATTTTGGAGATCATAGCAAAGATGGAAAAGCG TGGAGAGCGTTTCAAGCAGCCTATTGCTCTCAAAAGTGATACAAAGAATATCTCTACGCC TTTGGTTGATTCGTTTGCTGTGTCGACTGAACCTATGCAACCAAGACCAGCACGAAAGAG GAGATGGGCTGCAAGCAAGGCAACTGTTTAGTGCTTATACAAGAGAAGTTCCGTCTCACT TAATCTTCATAACTGGATCTGTATATAGTGGCGTCTCATAAAGAATGCTCCGTTTTGTTG CGCTAAATGTGTTTTTTTCTCCTCTGAAGTATAATTGATTATTTTGATTTCAAAGGATGT AAGGCCACCAATGATGATGAAGCAGCGGTTTGGAAGCAACTTTCCTTGTTTGAGTATATG GATCTACAAGTTCAAGTTGCAAACTTGTCTCAGATGTTTTGCTTCAATAAGTTGGTGAGT ATGGCGTAACGTTAGTGCAAGGGGTTCATCCAAATCCTTATCGTTGGAAATTACTTCGTA TATGATCAAATGAATACTAATTGTTTATTTATATATATATTTCTTTAAAAACATCAACTC TTTACTATCTTTACTTGAATATTAAATTACTAAAATATCTTTATCTT