Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g099090.2.1
CDS Infomation	evolutionarily conserved C-terminal region 2 (AHRD V3.3 - AT3G13460.4)
Sequence	ATGTCATCGCTCAGTTCTGCAGATCAGCCACGTGCTGAATCTCCTCTGGAATTGATTCAG GGTACTGAGGAAAACCTGCAGATCACTACTCCCCTGCTTCAGAACTCTCAAGCTATGTAT AATGAAGGAGCCCCTGAGTTTGTTGTTGATCAGGGATTATATTATCCACCTGCCACCAAT TATGGTTATTTCTGTACAGGATTAGAATCACCTGGTGATTGGGATGGCCACCAAGGATTT TTTGGTCTGGATGGTCAGGATATTCAGTATATGGATGCTCAAACTGAAAGTTTCCCGTAT GTATATTATACACCTAACTATGGATGTGCACAGTCTTCATATAACCCATACAACCCTTAC ATTCCTGGTGCCGTAGTAGGAGCTGATGGTCCATGTGCAGGGCCACAACATTACTACACA ATTCCCCCTTACGAAAACTTGGGATCATCTTCGTACTTCCCGATGGCGGTGCCATCTACA TCTAGTATTCCTGAGAATGCTGCAGATCCGATAATGGATAGTGTTATATCTTCTACTAAC AGAGCTGATGATCTTCGTCTTAAACGTAATTTATCTCCAACATCTCCAATATTTACCCCG ACTTCATTAGGGCCAGCTTCAGGTTATAAAAGTGCATCTAACAGGGGATCTGAAAGTGCA AAGATCAATGCTGCATCGGGCAAGCAGCACGTGTCACATGGTTTTTCCAGTCCATCCTCT CAGGGTACAGTTGCTCAAGCTATAGGAAGCATTATTCATGGGAAGGTTTTGTCTAATCAC GGTCAACTGAGAGCTCCTCTTCCACCTGAAATTGACTTGTCTAATCACAGATCAGGTGCT CATGATCAGGCTAATACAGATAAAATCAGGACAAAGTTTCTAAATGGAACAATCCCAAGT GATGGGAAAGTTAGTCCTGATATGTTGATGGAACAGAATAGAGGACCTCGAATTGACAAA ATGAAAAAGCAATTGCTTGTGAAGGCCTACTCTACAAGAGCAGGAAATGTTGATGTGCAA GGAAATATAGTTATTCATGCTGATGAGTACAATAGGGGTGATTTTCTGATGGACTTCGTG AACGCAAAGTTTTTTGTGATCAAATCATACAGTGAGGATGATGTGCACAAGAGTATAAAG TACAATGTTTGGTCATCAACCCCTAATGGGAACAAAAAGCTAAATAGTGCTTATGAAGAT GCTCAGAGAATTACTCCTGGAAATCCAAGAGGCTGCCCGATATTCCTTTTTTTCTCGGTT AATGCAAGTGGGCAGTTTTGTGGGGTCGCCGAAATGACTGGTCCTGTAGACTTCTACAAG GACATGGATTTCTGGCAGCAAGATAAGTGGAGTGGTAGCTTCCCTGTGAAGTGGCACTTC ATAAAGGATGTCCCTAACCCTAACTTTAGGCATATTATATTAGAGAACAATGAGAACAAG CCAGTAACTAACAGCAGAGACACACAAGAGATACGCTACAAGAAAGGCATTGAGATGCTG AAAGTATTTAAGGATTATGCGTCAAGGACATCATTGCTAGATGACTTCATGTATTATGAA AACAGACAGAAACTCTTGCAGGAAGAGAAAGCCAAGCTGCTAATCAGGAGCTACGATAAC CCATTTGCTGTTCCTGCACTTGATCCTCCACGCAAGCTAAATTCTACTCCAGGTCTACCT TCTGGTGGAAGTGAGAAGATCTCAAAGTATAGTGCTGTTCCTGTACTGGATCTTCCACTC AAGCTAAATTCTACTCCAGGTTTACCTTCTGGTGAAAGTGAGAAGATCTCAAAGTGTAGT GAACAACAACAATCTGGAAGTTGCATGGCTGTTCCTGCAGAACTGAATTCAATAGTTTCT AAAGCTAACAAAGAGAGTGCAGATAATGGTGACAAACTTGTGGCTGAAGGAGGTCCACTT GTGAATACTGCACTGAAAATTGGTTCCTTAACTATCAACCCGAAACCATTGAAAGATAAG CCGCTGGATGTACATAGCACTACTAATACAGTGGCCAGCACCCAGTCAGTTGATGTTGTC ACAGTGGGATCTATGCCTGTTAAAGTTAATGGACATGCTGAATCTTCTGGTTTCCTGACT ATTGGAACAATTCCTCTTGATCCTAGAGCTTTCCAGCTTGATGAGGCCAGTGGGTCTGGA AAAAAGGTCCTTAAGTGA

Peptide Sequence

PEP ID	Solyc12g099090.2.1
PEP Infomation	evolutionarily conserved C-terminal region 2 (AHRD V3.3 - AT3G13460.4)
Sequence	MSSLSSADQPRAESPLELIQGTEENLQITTPLLQNSQAMYNEGAPEFVVDQGLYYPPATN YGYFCTGLESPGDWDGHQGFFGLDGQDIQYMDAQTESFPYVYYTPNYGCAQSSYNPYNPY IPGAVVGADGPCAGPQHYYTIPPYENLGSSSYFPMAVPSTSSIPENAADPIMDSVISSTN RADDLRLKRNLSPTSPIFTPTSLGPASGYKSASNRGSESAKINAASGKQHVSHGFSSPSS QGTVAQAIGSIIHGKVLSNHGQLRAPLPPEIDLSNHRSGAHDQANTDKIRTKFLNGTIPS DGKVSPDMLMEQNRGPRIDKMKKQLLVKAYSTRAGNVDVQGNIVIHADEYNRGDFLMDFV NAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLNSAYEDAQRITPGNPRGCPIFLFFSV NASGQFCGVAEMTGPVDFYKDMDFWQQDKWSGSFPVKWHFIKDVPNPNFRHIILENNENK PVTNSRDTQEIRYKKGIEMLKVFKDYASRTSLLDDFMYYENRQKLLQEEKAKLLIRSYDN PFAVPALDPPRKLNSTPGLPSGGSEKISKYSAVPVLDLPLKLNSTPGLPSGESEKISKCS EQQQSGSCMAVPAELNSIVSKANKESADNGDKLVAEGGPLVNTALKIGSLTINPKPLKDK PLDVHSTTNTVASTQSVDVVTVGSMPVKVNGHAESSGFLTIGTIPLDPRAFQLDEASGSG KKVLK*

Transcript Sequence

Transcript ID	Solyc12g099090.2.1
Transcript Infomation	evolutionarily conserved C-terminal region 2 (AHRD V3.3 - AT3G13460.4)
Sequence	TCTCTCTTGCTCTTGCGTATTCCAATTTTTTTGTGTTTTGCAAAAAGTCCGCCATTTTTT TCTTTCTAGGGTTAGGGTTTTACTTTTAACCATGTTTTGTTTTTTGAGAAGTTTGGAGAT TGTAGAATGGTAAAGGTATTCCTTTTTTCTGTTCAGGAGTTGTTCAGTTTAATTGTCATC GTTCAGTTCTGCAGGTCAACTATGTGCTGAATCTCCTCTGGAATTGGGGTTGTTTGGTTT AAATGTCATCGCTCAGTTCTGCAGATCAGCCACGTGCTGAATCTCCTCTGGAATTGATTC AGGGTACTGAGGAAAACCTGCAGATCACTACTCCCCTGCTTCAGAACTCTCAAGCTATGT ATAATGAAGGAGCCCCTGAGTTTGTTGTTGATCAGGGATTATATTATCCACCTGCCACCA ATTATGGTTATTTCTGTACAGGATTAGAATCACCTGGTGATTGGGATGGCCACCAAGGAT TTTTTGGTCTGGATGGTCAGGATATTCAGTATATGGATGCTCAAACTGAAAGTTTCCCGT ATGTATATTATACACCTAACTATGGATGTGCACAGTCTTCATATAACCCATACAACCCTT ACATTCCTGGTGCCGTAGTAGGAGCTGATGGTCCATGTGCAGGGCCACAACATTACTACA CAATTCCCCCTTACGAAAACTTGGGATCATCTTCGTACTTCCCGATGGCGGTGCCATCTA CATCTAGTATTCCTGAGAATGCTGCAGATCCGATAATGGATAGTGTTATATCTTCTACTA ACAGAGCTGATGATCTTCGTCTTAAACGTAATTTATCTCCAACATCTCCAATATTTACCC CGACTTCATTAGGGCCAGCTTCAGGTTATAAAAGTGCATCTAACAGGGGATCTGAAAGTG CAAAGATCAATGCTGCATCGGGCAAGCAGCACGTGTCACATGGTTTTTCCAGTCCATCCT CTCAGGGTACAGTTGCTCAAGCTATAGGAAGCATTATTCATGGGAAGGTTTTGTCTAATC ACGGTCAACTGAGAGCTCCTCTTCCACCTGAAATTGACTTGTCTAATCACAGATCAGGTG CTCATGATCAGGCTAATACAGATAAAATCAGGACAAAGTTTCTAAATGGAACAATCCCAA GTGATGGGAAAGTTAGTCCTGATATGTTGATGGAACAGAATAGAGGACCTCGAATTGACA AAATGAAAAAGCAATTGCTTGTGAAGGCCTACTCTACAAGAGCAGGAAATGTTGATGTGC AAGGAAATATAGTTATTCATGCTGATGAGTACAATAGGGGTGATTTTCTGATGGACTTCG TGAACGCAAAGTTTTTTGTGATCAAATCATACAGTGAGGATGATGTGCACAAGAGTATAA AGTACAATGTTTGGTCATCAACCCCTAATGGGAACAAAAAGCTAAATAGTGCTTATGAAG ATGCTCAGAGAATTACTCCTGGAAATCCAAGAGGCTGCCCGATATTCCTTTTTTTCTCGG TTAATGCAAGTGGGCAGTTTTGTGGGGTCGCCGAAATGACTGGTCCTGTAGACTTCTACA AGGACATGGATTTCTGGCAGCAAGATAAGTGGAGTGGTAGCTTCCCTGTGAAGTGGCACT TCATAAAGGATGTCCCTAACCCTAACTTTAGGCATATTATATTAGAGAACAATGAGAACA AGCCAGTAACTAACAGCAGAGACACACAAGAGATACGCTACAAGAAAGGCATTGAGATGC TGAAAGTATTTAAGGATTATGCGTCAAGGACATCATTGCTAGATGACTTCATGTATTATG AAAACAGACAGAAACTCTTGCAGGAAGAGAAAGCCAAGCTGCTAATCAGGAGCTACGATA ACCCATTTGCTGTTCCTGCACTTGATCCTCCACGCAAGCTAAATTCTACTCCAGGTCTAC CTTCTGGTGGAAGTGAGAAGATCTCAAAGTATAGTGCTGTTCCTGTACTGGATCTTCCAC TCAAGCTAAATTCTACTCCAGGTTTACCTTCTGGTGAAAGTGAGAAGATCTCAAAGTGTA GTGAACAACAACAATCTGGAAGTTGCATGGCTGTTCCTGCAGAACTGAATTCAATAGTTT CTAAAGCTAACAAAGAGAGTGCAGATAATGGTGACAAACTTGTGGCTGAAGGAGGTCCAC TTGTGAATACTGCACTGAAAATTGGTTCCTTAACTATCAACCCGAAACCATTGAAAGATA AGCCGCTGGATGTACATAGCACTACTAATACAGTGGCCAGCACCCAGTCAGTTGATGTTG TCACAGTGGGATCTATGCCTGTTAAAGTTAATGGACATGCTGAATCTTCTGGTTTCCTGA CTATTGGAACAATTCCTCTTGATCCTAGAGCTTTCCAGCTTGATGAGGCCAGTGGGTCTG GAAAAAAGGTCCTTAAGTGA