Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g098860.2.1
CDS Infomation

chromatin remodeling factor18 (AHRD V3.3 *** AT1G48310.1)
Sequence

ATGGATTTTGATGATTGGGAATTGAGTGTAGAGGAATTGGATAAACTTGAAAGAGATGCC
CTAAGGCAAATTGCTGAGCGGAATGCATCTTCTTCTTCTGCTACGACGAGTTCCTGTTTG
CAATCATCTCGCCTTCAAGGAGATGTTAATGGTTCTGGGGTTTCATATAAAAGGGAAGAT
GTGTTATCTGCTGCATCTATAATAAGACCTTCATCAGGATATGATAAGGGCTCTGGGAAA
AGCTCTGTTGGAAATTCTGGGCCTCATAATGACAATCACTTGAAACAGCTAACAGAAAAG
CGCTATGCTAAATTTTTCCTTCATGCAAGTGGAAATATTGCTGCAAAGTTTTCATATGAC
CAGATACTTGTTGAAGCTTGCCGTAAAATCCCAAAAGCTAGTTGGAGTGCAAAAGAGAGG
TTGTGGATGTTTCCTTTGTCATCGTTGTCTGAAGCAGAAAAAGTTTTCCATGAAATTGCT
GGCTCCAATCTAGAGTTGGAGAATTTAGATCCTCTGGTGCAACGTGCCATCGCTGCTGCT
TCTGTGATGCCTGACCTTCGAGATCATTATGAATTTATTCCAAATAGTATTGAAACAAAG
CTGTTGCCTTTTCAACGGGAAGGGGTTAAATTTGCATTACAACATGGAGGGCGTATCCTG
TTGGCTGATGAGATGGGACTTGGAAAGACTCTTCAGGCTATCGCTGTGGTTTCATGTGTC
CGTGAATCATGGCCAGTTCTTGTTCTTGCTCCATCTGCCTTACGGCTTCACTGGGCTTCG
ATGATTCAACAGTGGATGAACATCCCGTCATCAGAAATACTTGTAGTTTTATCTAAAAGC
AGCGGTTCAAATAAGGGAGGATTCAAAATAGTTCCTCCAAACACTAAGAAGTCCATTCAC
CTTGATGGTGTGTTCAACATAGTATCATATGACACTGTACCTAAGCTTCAAGATTTACTT
ATGGCATCAACGTTTAAGGTTGTTATAGCAGATGAATCACACTACTTGAAAAATGCCCAA
GCAAAAAGAACCAGTGCTTCCCTTCCCTTATTACAGAAAGCTCAGTATGTGATATTGCTC
AGTGGAACTCCTGCTTTATCAAGGCCAATTGAACTATTCAAACAGCTCGAGGCCTTGCAT
CCTACTGTATATAAGAACGTGCACGAATATGGCAACCGCTATTGCAAGGGTGGCATCTTT
GGAGTTTATCAAGGTGCAAGTAATCACGAAGAGCTGCACAGTTTAATCAAAGCAACACTG
ATGATTCGACGACTGAAAAAGGATGTCCTTTCTGAACTCCCTCAGAAGCGGAGGCAACAG
GTTTTCCTAAACTTGGGGGAGAAGGAGATGAGACAAGTTAATGCTCTATTTCGTGAGTTG
GAGGTCATTAAGGCGAAAGGCAAATCAGCTCAGTCCGAGGAGGAGGCTAATTCTCTTAAG
TTTGCAGAGAAGAGCCTCATCAGTAAGATTTACACTGCCTCCGCTGAGGCCAAAATTCCA
GCAGTTTTGGATTACCTAGGAACCATGGTTGAGGCAAACTGCAAGTTCCTGATATTTGCA
CATCATCAATCAATGATTGATTCAATACATGAGTATTTACTTAAGAATAAGGTTGGTTGT
ATTAGGATTGATGGCAGCACTCCATCAGCATTACGACAAGATTTGGTGACAGATTTTCAG
AAAAAAGAAACAATTAAGGCTGCAGTGCTTTCCATCAGAGCTGCGGGAGTTGGGTTAACG
TTAACAGCCGCAAGCACAGTGATATTTGCAGAATTATCATGGACTCCAGGTGACCTTATT
CAAGCCGAGGATCGAGCTCACAGAATTGGCCAGGTGTCCTCTGTCAATGTGTGTTATCTG
CTGGCGAATGACACTGTTGATGACATAATTTGGGGTGTCGTTCAGAGCAAGCTTGACAAC
CTTGGACAGATGCTTGATGGCCAGGAGAAATCATTGGATGTTTCGACTAATCAGTCCCAC
AGCAGCTCTTCAAAACAGAATACCCTCGACTCCTTCATAAAGCGCTGTAATAACTCACCA
CCTCAGGATCCCAGCAAAAAACATTGTCTTCAGTAA

Peptide Sequence

PEP ID

Solyc12g098860.2.1
PEP Infomation

chromatin remodeling factor18 (AHRD V3.3 *** AT1G48310.1)
Sequence

MDFDDWELSVEELDKLERDALRQIAERNASSSSATTSSCLQSSRLQGDVNGSGVSYKRED
VLSAASIIRPSSGYDKGSGKSSVGNSGPHNDNHLKQLTEKRYAKFFLHASGNIAAKFSYD
QILVEACRKIPKASWSAKERLWMFPLSSLSEAEKVFHEIAGSNLELENLDPLVQRAIAAA
SVMPDLRDHYEFIPNSIETKLLPFQREGVKFALQHGGRILLADEMGLGKTLQAIAVVSCV
RESWPVLVLAPSALRLHWASMIQQWMNIPSSEILVVLSKSSGSNKGGFKIVPPNTKKSIH
LDGVFNIVSYDTVPKLQDLLMASTFKVVIADESHYLKNAQAKRTSASLPLLQKAQYVILL
SGTPALSRPIELFKQLEALHPTVYKNVHEYGNRYCKGGIFGVYQGASNHEELHSLIKATL
MIRRLKKDVLSELPQKRRQQVFLNLGEKEMRQVNALFRELEVIKAKGKSAQSEEEANSLK
FAEKSLISKIYTASAEAKIPAVLDYLGTMVEANCKFLIFAHHQSMIDSIHEYLLKNKVGC
IRIDGSTPSALRQDLVTDFQKKETIKAAVLSIRAAGVGLTLTAASTVIFAELSWTPGDLI
QAEDRAHRIGQVSSVNVCYLLANDTVDDIIWGVVQSKLDNLGQMLDGQEKSLDVSTNQSH
SSSSKQNTLDSFIKRCNNSPPQDPSKKHCLQ*

Transcript Sequence

Transcript ID

Solyc12g098860.2.1
Transcript Infomation

chromatin remodeling factor18 (AHRD V3.3 *** AT1G48310.1)
Sequence

TATTTTTTTTTATTGGTTCAATAAATTTCTTAACAAAAAAATAAACCGGACGATGACTCT
TGTTATTTTATTAAGGATGTTTTTTTTGCCTATAGAAAGATGTATATTATTTGAGTAGTA
GTCAAAAACTCAATATCTATCTCAAAACCCCCAAAATTTGGGGGGAAAAAACGCGGGCAG
CAGTTCTTGAAATTCAAAAAATTGGAGTTTTGGAGAAGAAGAAGAAGGAAAAAATGGATT
TTGATGATTGGGAATTGAGTGTAGAGGAATTGGATAAACTTGAAAGAGATGCCCTAAGGC
AAATTGCTGAGCGGAATGCATCTTCTTCTTCTGCTACGACGAGTTCCTGTTTGCAATCAT
CTCGCCTTCAAGGAGATGTTAATGGTTCTGGGGTTTCATATAAAAGGGAAGATGTGTTAT
CTGCTGCATCTATAATAAGACCTTCATCAGGATATGATAAGGGCTCTGGGAAAAGCTCTG
TTGGAAATTCTGGGCCTCATAATGACAATCACTTGAAACAGCTAACAGAAAAGCGCTATG
CTAAATTTTTCCTTCATGCAAGTGGAAATATTGCTGCAAAGTTTTCATATGACCAGATAC
TTGTTGAAGCTTGCCGTAAAATCCCAAAAGCTAGTTGGAGTGCAAAAGAGAGGTTGTGGA
TGTTTCCTTTGTCATCGTTGTCTGAAGCAGAAAAAGTTTTCCATGAAATTGCTGGCTCCA
ATCTAGAGTTGGAGAATTTAGATCCTCTGGTGCAACGTGCCATCGCTGCTGCTTCTGTGA
TGCCTGACCTTCGAGATCATTATGAATTTATTCCAAATAGTATTGAAACAAAGCTGTTGC
CTTTTCAACGGGAAGGGGTTAAATTTGCATTACAACATGGAGGGCGTATCCTGTTGGCTG
ATGAGATGGGACTTGGAAAGACTCTTCAGGCTATCGCTGTGGTTTCATGTGTCCGTGAAT
CATGGCCAGTTCTTGTTCTTGCTCCATCTGCCTTACGGCTTCACTGGGCTTCGATGATTC
AACAGTGGATGAACATCCCGTCATCAGAAATACTTGTAGTTTTATCTAAAAGCAGCGGTT
CAAATAAGGGAGGATTCAAAATAGTTCCTCCAAACACTAAGAAGTCCATTCACCTTGATG
GTGTGTTCAACATAGTATCATATGACACTGTACCTAAGCTTCAAGATTTACTTATGGCAT
CAACGTTTAAGGTTGTTATAGCAGATGAATCACACTACTTGAAAAATGCCCAAGCAAAAA
GAACCAGTGCTTCCCTTCCCTTATTACAGAAAGCTCAGTATGTGATATTGCTCAGTGGAA
CTCCTGCTTTATCAAGGCCAATTGAACTATTCAAACAGCTCGAGGCCTTGCATCCTACTG
TATATAAGAACGTGCACGAATATGGCAACCGCTATTGCAAGGGTGGCATCTTTGGAGTTT
ATCAAGGTGCAAGTAATCACGAAGAGCTGCACAGTTTAATCAAAGCAACACTGATGATTC
GACGACTGAAAAAGGATGTCCTTTCTGAACTCCCTCAGAAGCGGAGGCAACAGGTTTTCC
TAAACTTGGGGGAGAAGGAGATGAGACAAGTTAATGCTCTATTTCGTGAGTTGGAGGTCA
TTAAGGCGAAAGGCAAATCAGCTCAGTCCGAGGAGGAGGCTAATTCTCTTAAGTTTGCAG
AGAAGAGCCTCATCAGTAAGATTTACACTGCCTCCGCTGAGGCCAAAATTCCAGCAGTTT
TGGATTACCTAGGAACCATGGTTGAGGCAAACTGCAAGTTCCTGATATTTGCACATCATC
AATCAATGATTGATTCAATACATGAGTATTTACTTAAGAATAAGGTTGGTTGTATTAGGA
TTGATGGCAGCACTCCATCAGCATTACGACAAGATTTGGTGACAGATTTTCAGAAAAAAG
AAACAATTAAGGCTGCAGTGCTTTCCATCAGAGCTGCGGGAGTTGGGTTAACGTTAACAG
CCGCAAGCACAGTGATATTTGCAGAATTATCATGGACTCCAGGTGACCTTATTCAAGCCG
AGGATCGAGCTCACAGAATTGGCCAGGTGTCCTCTGTCAATGTGTGTTATCTGCTGGCGA
ATGACACTGTTGATGACATAATTTGGGGTGTCGTTCAGAGCAAGCTTGACAACCTTGGAC
AGATGCTTGATGGCCAGGAGAAATCATTGGATGTTTCGACTAATCAGTCCCACAGCAGCT
CTTCAAAACAGAATACCCTCGACTCCTTCATAAAGCGCTGTAATAACTCACCACCTCAGG
ATCCCAGCAAAAAACATTGTCTTCAGTAAGCCACTCAAGAACAAATATTGAACCCCCATC
TTGTATGCACATTACTGTATATTCGACTAGTGGTATGATACTGTTTTTGCAAGTAGTATG
GTGTATTCCCTCATTTTTGTCTGATAGATGTAGGCTGTTAGAAATGCAGCTTTATGGTAA
ACACATTTTTTGTTTCAACTATTTTATCGCCTTTTTTTTTGTGTATGTTTTGAATATCAG
ATGATTATTGATATCGATCAATCAACTACGCCTTAATTTCAATTTTGGGTGTACATTTTC
ATGTCTTCAAATGAGTGTGTTTAGTCCCTTTCTATATGTTATATATGATATTTAGCATTT
GTTAAAGATTTACATGCAAAGTTCAAATCATTTGTAGATTAAATCATACATCACAAGGAC
AAAATTATACCAAATATAAAAAGAACCATCTCACTATATAATGATAATATTCACATAAAT
AGCAAACTTTATCTATATTGCTGATATTTACATTACAAAAAAAGATTCAAACTCATTGCC
AAAATCCCAAAAAAACCTACCTACTATATTGCTAATGAAAGAAAAAAAGATTTAAGGCAA
AGCATTGGCCAAGCCTACTTCTTGATATCTGCCAAGTAAATTGGCTGCAATTAGACTCAC
ATCCTCTAAACCAACCCCAATACATAGAGAGTTACTTGTAGTTGGAGCAGAGCTAACAGC
AACCGAGTCACCGGCTTGGAAGGCGTCCGAGATGCTGCTGCTGCTACACCCTGAAACTTT
GACATTAGGACCAACTTTACACTTTCCCATGCATTTGCAA