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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g098610.2.1
CDS Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4DHN4_SOLLC)
Sequence

ATGAATTCTTGCATGTTTTCTTGTGGTGGAAATTTCATCCAAGAATTTGACTTTAATTGG
GGTGGCAATAGAGTCAAGATTTTCAATGGAGGCCAAATTCTTTCTTTGTCTATGGACAAA
TTCTCTGGCTCTGGTTTTCAATCCAAAAAAGATTATCTTTTTGGGAGAATCGACATGCAA
CTCAAACTCGTTACCGGAAATTCTGCTGGCACTGTCACATCATACTATCTATCTTCTAAA
GGACCAACTCATGATGAAATTGATTTTGAGTTCTTAGGAAATGTTAGTGGTGAACCATAT
ATTCTTCATACAAATGTGTTTAGCCAAGGCAAAGGAGACAAAGAGCAGCAATTTTACCTA
TGGTTTGATCCTACCAAGAACTTCCACACCTACTCAATCATATGGAAACCACAACACATC
ATTTTCTTGGTGGACAACACTCCAATTAGAGTATTCAAGAATGCAGAATCACTTGGTGTT
CCATTTCCCAAGAACCAACCAATGAAAATTTACTCAAGTCTATGGAATGCTGATGATTGG
GCTACAAGAGGTGGACTAGTGAAAACTGATTGGTCAAAAGCACCATTCACAGCTTATTAC
AGAAATTTCTATGCACAAAAATTTAACAAATCTCAATTTTTAGATGCAAAATGGCAAAAT
CAAGAACTTGATGCTAATGGAAGAAGAAGACTTAGATGGGTTCAAAGGAATTATATGATT
TATAATTATTGCACTGATTATAAAAGATTTCCTCAAGGGTTTCCTCTAGAATGTAGAAAA
TTTTGA

Peptide Sequence

PEP ID

Solyc12g098610.2.1
PEP Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4DHN4_SOLLC)
Sequence

MNSCMFSCGGNFIQEFDFNWGGNRVKIFNGGQILSLSMDKFSGSGFQSKKDYLFGRIDMQ
LKLVTGNSAGTVTSYYLSSKGPTHDEIDFEFLGNVSGEPYILHTNVFSQGKGDKEQQFYL
WFDPTKNFHTYSIIWKPQHIIFLVDNTPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDW
ATRGGLVKTDWSKAPFTAYYRNFYAQKFNKSQFLDAKWQNQELDANGRRRLRWVQRNYMI
YNYCTDYKRFPQGFPLECRKF*

Transcript Sequence

Transcript ID

Solyc12g098610.2.1
Transcript Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4DHN4_SOLLC)
Sequence

TTTGTCCTCTCCTTTATAGCTCACCTCTATTCTATCCACTATAAATATTTGTCCACTTTA
AACCCCATTTTCCCACACAAGTGTAAATCACAAAAACCCTAAATTCAATTTTTTTAAAAA
TTAATCAAAAACTTTTTCACTTCTATCTATTGCTAGAAAAAAAAATGGAATTTTCCCATT
ATGAGTTACCAAAAGTGTTGTTTATTTTTTAGTCTTTATGAATTCTTGCATGTTTTCTTG
TGGTGGAAATTTCATCCAAGAATTTGACTTTAATTGGGGTGGCAATAGAGTCAAGATTTT
CAATGGAGGCCAAATTCTTTCTTTGTCTATGGACAAATTCTCTGGCTCTGGTTTTCAATC
CAAAAAAGATTATCTTTTTGGGAGAATCGACATGCAACTCAAACTCGTTACCGGAAATTC
TGCTGGCACTGTCACATCATACTATCTATCTTCTAAAGGACCAACTCATGATGAAATTGA
TTTTGAGTTCTTAGGAAATGTTAGTGGTGAACCATATATTCTTCATACAAATGTGTTTAG
CCAAGGCAAAGGAGACAAAGAGCAGCAATTTTACCTATGGTTTGATCCTACCAAGAACTT
CCACACCTACTCAATCATATGGAAACCACAACACATCATTTTCTTGGTGGACAACACTCC
AATTAGAGTATTCAAGAATGCAGAATCACTTGGTGTTCCATTTCCCAAGAACCAACCAAT
GAAAATTTACTCAAGTCTATGGAATGCTGATGATTGGGCTACAAGAGGTGGACTAGTGAA
AACTGATTGGTCAAAAGCACCATTCACAGCTTATTACAGAAATTTCTATGCACAAAAATT
TAACAAATCTCAATTTTTAGATGCAAAATGGCAAAATCAAGAACTTGATGCTAATGGAAG
AAGAAGACTTAGATGGGTTCAAAGGAATTATATGATTTATAATTATTGCACTGATTATAA
AAGATTTCCTCAAGGGTTTCCTCTAGAATGTAGAAAATTTTGA