Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g096980.2.1
CDS Infomation

auxin-regulated IAA11
Sequence

ATGAATAGTTTTAATCAATCAAAGATTACAAATGCTGATCATCAACAAGAAGAAAATGTG
AACAAAGAAACTGAGAGTTCAAACAAGAAAATTAATCATGGAATTAATAATACCAAGAAT
AATGATGTAGATTTTGTAAAGGTGAATATGGATGGATTGCCAATTGGAAGAAAAGTGAAT
TTGAGTTCTCATATTTGCTATGAAACTTTAGCCAAAATCTTGGAGGAGATGTTCTTCAAA
TCAACCAAAACTACTAATTGTGGAGAAAAAGAACAAGTAACAAAGTCATGTAAGCTCTTG
GATGGATCATCAGAGTTTGTTCTCACATATGAGGATAAAGATGGAGATTGGATGCTTGTA
GGAGATGTTCCATGGGGGATGTTTTTGAGCAATGTGAAAAGACTAAGAATCATGAGGACT
ACTGAGGCCAAAGGACTTTGTATGTAG

Peptide Sequence

PEP ID

Solyc12g096980.2.1
PEP Infomation

auxin-regulated IAA11
Sequence

MNSFNQSKITNADHQQEENVNKETESSNKKINHGINNTKNNDVDFVKVNMDGLPIGRKVN
LSSHICYETLAKILEEMFFKSTKTTNCGEKEQVTKSCKLLDGSSEFVLTYEDKDGDWMLV
GDVPWGMFLSNVKRLRIMRTTEAKGLCM*

Transcript Sequence

Transcript ID

Solyc12g096980.2.1
Transcript Infomation

auxin-regulated IAA11
Sequence

ATTGTGCGATTAAATGTTAGTATTTTTTTTTTTTTGTTATAGCTTCACCATGATAATTCC
ATTTGTTTTATGAAAAAATGTATGATGATGATATAAGCCTTTTTTGGTAAATTTGGTGAC
TATATTAGGAGTTTTTACTTGAGTTATGGCTTTGAAGTGATTGTTTTTTTATTTTTATGG
TTGTGGTGGAAAGAATGTGATTCTTTAAGGATAATTATAAGCTTTGTATATGGTGAAAAG
ACTAACATAATAGGGTCGTTGTGTTGCTCGCTAAATAAAGAGTTAATATTCAAAATTCTT
TACTATCAAATATTTCTTGTGTTTTGACCATCACATTACTTTATTTGGTTGTTGTTATTG
TCTAGTTTACCCTTTATTATATGTTATTTCGTCTTTACCTTTGTACACTGTTTGATATGC
GTTAATTGACTGGGGATCTTTTGGATAGACGAAAACACTCTCTCTATACCTCTTGAAGGA
GTTTTAGTGGGGGTACAATCGTAGTAGGCTCTACCTTCTGTAGAATTACACTTAATATAT
ATATATATTATCGTTATTGTCTTTTGGGAACGATAAACTATGGATAGGGAGGGAGCAATT
TCTTTTTATGGGCTTGTGTGGTATTAATCAGATCAATGAATTTCGAAATTCAAACAATTA
TAAAAAAAAAAGTGCTTATTTTTCCTTACTTTAATTCTCTCTATTAATTAATATAACATT
TAATTGGTACATCCACATTACTATGTTCATATAATTTTTTTTGTAGCCTTAGTTATTTCT
AACCAATATAATTGCATTTCTTTTGAAGCAGTCAGGTTGTGGGATGGCCACCAATAAGGA
CTTACAGGATGAATAGTTTTAATCAATCAAAGATTACAAATGCTGATCATCAACAAGAAG
AAAATGTGAACAAAGAAACTGAGAGTTCAAACAAGAAAATTAATCATGGAATTAATAATA
CCAAGAATAATGATGTAGATTTTGTAAAGGTGAATATGGATGGATTGCCAATTGGAAGAA
AAGTGAATTTGAGTTCTCATATTTGCTATGAAACTTTAGCCAAAATCTTGGAGGAGATGT
TCTTCAAATCAACCAAAACTACTAATTGTGGAGAAAAAGAACAAGTAACAAAGTCATGTA
AGCTCTTGGATGGATCATCAGAGTTTGTTCTCACATATGAGGATAAAGATGGAGATTGGA
TGCTTGTAGGAGATGTTCCATGGGGGATGTTTTTGAGCAATGTGAAAAGACTAAGAATCA
TGAGGACTACTGAGGCCAAAGGACTTTGTATGTAGAAACATGGAGAGACACAAAGCAAAT
TGATCTAGTTTACTTAATTAGCAAATTATCAAATGAGAACACAACTTGGAAAAACTATAT
AAGAAAATAGTACAAGTAGAGAAGCAAAGAGTACACATTTTGGGGAGTACTTTTTATAGT
TTCAATTTTTGTTTATGCATTTTTTTTTGTCTAATGTAAGCCTTATTCAAGTTACTAGTT
CTTAAAACCCCTTATATAATTGATACATATGCTTGCTAGATCCTTATATATTGTTATGAT
TTTTTTCTTTCATTATTTTGAGTTCAATTCTTTTTATTATTGTACTGTTTCTATTTTCTA
TATATTGAAAATAATTTCTCTATCTTCTAA