Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g096680.1.1
CDS Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT2G03880.1)
Sequence	ATGAAAACCTTATTGAGATTCAAAGAAAACGTCATATCAGTACATGGATTGGTTATTTCT GGTCCATTGTTACCACTTCTGTTTCAGCATCTGCGTTGTTGCTCTGGTGCAACAATTCAG TGGAAGAATGAGAGAGTACCAATCAAATGTAGTGATTTGCTCGATGAGTTCACTACTTAT TGCTATGCGAGGGATCTTCCAAGGGCAATGAACGCATTGAATGCCTTGCAAATTCAAAAG ATATGGGCTGATGCTGTCACCTACTCTGAACTCATCAAGTGTTGTTTGGCTCGTGGCGCA GTGGAACATGGTAAACGTGTCCACCAGCATGTGTTCTCGAATGGTTATGAGCCTAAAACT TTCCTTGTTAACACACTTATGAATATGTATGTGAAGTTTAACATGTTGGAGGAAGCGCAG GCTTTGTTTGATCAAATGTCTGAGAGGAATGTTGTTTCCTGGACTACCATGATAGCTGCC TACTCTAGTGCTAAGATCAATAACAAGGCTTTGGAGTTTTTGATCTTCATGATGAGAGAT GGCGTGAAACCTAATATGTTTACTTACTCCTCTGTTCTGAGAGCTTGTGATGACCTTTCC AATCTTAGGCAGCTCCACTGTAGCTTACTTAAAGTTGGTCTGGAGTCTGATGTATTTGTC CGAAGTGCTCTTATTGACGTTTACTCCAAAATGGGTCAACTCGAGTGTGCAATGTGCACC TTTAATGAGATGGTGACTGGGGATCTTGTTGTGTGGAATTCCATTATTGGTGGATTTGCG CAAAACAGTGATGGGGATGAAGCCTTGACTCTCTTTAAAAGAATGAAGAGAGCTGGATTC TCAGCTGATCAGTCGACCTTGACAAGTGCTCTTAGAGCTTGTACTAGTTTAGCACTTTTA GAAGTTGGAAGGCAGGTCCATGTTCATGTACTCAAGTTCAAGCGGGACCTAATCCTTGAT AATGCACTTTTGGACATGTATTGCAAGTGTGGCAATTTGGAAGATGCCCACCAAATATTT AGTCAGATGGTAGAGAAGGACGTAATCTCCTGGAGTACCATGATCATAGGCTACGCTCAG AATGGTTTCAGCAGAAAAGCACTCGAATTGTTCAAGGAGATGAAAGTCTCAGGGATCAGA CCAAACTACATCACTGTTCTTGGAGTTCTATTCGCTTGTAGCCATGCAGGACTCGTAGAA GATGGACAATTTTACTTCCACTCAATGAAGAAGCTCTTTGGTATTGATCCAGGAAGAGAA CACTATGGCTGCATGGTTGATCTTCTTGGAAGATCTGGAAAGCTAGATGAAGCGGTGAAA CTAATCCATGAAATGGGATGTGAACCAGATGCAGTGACATGGAGAACATTGCTTGGTGCC TGCAGAGTACATCGTAACATGGATTTAGCTGAGTATGCCGCCAAACAAATTATAAAGCTG GATCCAAGTGACGCGGGAACTTACATATTACTATCTAACATATATGCTCGTACTCAAAAA TGGGAAGACGTTATGGACCTGAGAAGGTCCATGAAGGAAAGAGGAGTAAAGAAGGAACCA GGGTGCAGCTGGATTGAAGTAAACAAACAAATCCATGCTTTTATAATGGGAGACAACTCT CATCCACAAAAAGAGGAAATCAACAAAGAGCTAAATCAGATTATTTGGAGATTAAAAGAG GTGGGATATGTTCCAGATACAAACTTTGTCTTGCAAGATCTTGAAGATGAACAGATGGAA GACTCACTTCTGTATCACAGTGAGAAAATAGCTGTTGCCTTTGGTATACTAAGCCTGTCT AGAGAGAAGACCATTAGAATCAGGAAAAATCTAAGGATATGTGGGGATTGTCATTTATTT GTGAAACTTTTGGCACAGATAGAGCATAGAAGCATTGTCATAAGAGATCCAATCAGGTAT CATCATTTTCAGGATGGTATTTGTTCTTGTGGAGATTATTGGTAG

Peptide Sequence

PEP ID	Solyc12g096680.1.1
PEP Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT2G03880.1)
Sequence	MKTLLRFKENVISVHGLVISGPLLPLLFQHLRCCSGATIQWKNERVPIKCSDLLDEFTTY CYARDLPRAMNALNALQIQKIWADAVTYSELIKCCLARGAVEHGKRVHQHVFSNGYEPKT FLVNTLMNMYVKFNMLEEAQALFDQMSERNVVSWTTMIAAYSSAKINNKALEFLIFMMRD GVKPNMFTYSSVLRACDDLSNLRQLHCSLLKVGLESDVFVRSALIDVYSKMGQLECAMCT FNEMVTGDLVVWNSIIGGFAQNSDGDEALTLFKRMKRAGFSADQSTLTSALRACTSLALL EVGRQVHVHVLKFKRDLILDNALLDMYCKCGNLEDAHQIFSQMVEKDVISWSTMIIGYAQ NGFSRKALELFKEMKVSGIRPNYITVLGVLFACSHAGLVEDGQFYFHSMKKLFGIDPGRE HYGCMVDLLGRSGKLDEAVKLIHEMGCEPDAVTWRTLLGACRVHRNMDLAEYAAKQIIKL DPSDAGTYILLSNIYARTQKWEDVMDLRRSMKERGVKKEPGCSWIEVNKQIHAFIMGDNS HPQKEEINKELNQIIWRLKEVGYVPDTNFVLQDLEDEQMEDSLLYHSEKIAVAFGILSLS REKTIRIRKNLRICGDCHLFVKLLAQIEHRSIVIRDPIRYHHFQDGICSCGDYW*

Transcript Sequence

Transcript ID	Solyc12g096680.1.1
Transcript Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT2G03880.1)
Sequence	ATGAAAACCTTATTGAGATTCAAAGAAAACGTCATATCAGTACATGGATTGGTTATTTCT GGTCCATTGTTACCACTTCTGTTTCAGCATCTGCGTTGTTGCTCTGGTGCAACAATTCAG TGGAAGAATGAGAGAGTACCAATCAAATGTAGTGATTTGCTCGATGAGTTCACTACTTAT TGCTATGCGAGGGATCTTCCAAGGGCAATGAACGCATTGAATGCCTTGCAAATTCAAAAG ATATGGGCTGATGCTGTCACCTACTCTGAACTCATCAAGTGTTGTTTGGCTCGTGGCGCA GTGGAACATGGTAAACGTGTCCACCAGCATGTGTTCTCGAATGGTTATGAGCCTAAAACT TTCCTTGTTAACACACTTATGAATATGTATGTGAAGTTTAACATGTTGGAGGAAGCGCAG GCTTTGTTTGATCAAATGTCTGAGAGGAATGTTGTTTCCTGGACTACCATGATAGCTGCC TACTCTAGTGCTAAGATCAATAACAAGGCTTTGGAGTTTTTGATCTTCATGATGAGAGAT GGCGTGAAACCTAATATGTTTACTTACTCCTCTGTTCTGAGAGCTTGTGATGACCTTTCC AATCTTAGGCAGCTCCACTGTAGCTTACTTAAAGTTGGTCTGGAGTCTGATGTATTTGTC CGAAGTGCTCTTATTGACGTTTACTCCAAAATGGGTCAACTCGAGTGTGCAATGTGCACC TTTAATGAGATGGTGACTGGGGATCTTGTTGTGTGGAATTCCATTATTGGTGGATTTGCG CAAAACAGTGATGGGGATGAAGCCTTGACTCTCTTTAAAAGAATGAAGAGAGCTGGATTC TCAGCTGATCAGTCGACCTTGACAAGTGCTCTTAGAGCTTGTACTAGTTTAGCACTTTTA GAAGTTGGAAGGCAGGTCCATGTTCATGTACTCAAGTTCAAGCGGGACCTAATCCTTGAT AATGCACTTTTGGACATGTATTGCAAGTGTGGCAATTTGGAAGATGCCCACCAAATATTT AGTCAGATGGTAGAGAAGGACGTAATCTCCTGGAGTACCATGATCATAGGCTACGCTCAG AATGGTTTCAGCAGAAAAGCACTCGAATTGTTCAAGGAGATGAAAGTCTCAGGGATCAGA CCAAACTACATCACTGTTCTTGGAGTTCTATTCGCTTGTAGCCATGCAGGACTCGTAGAA GATGGACAATTTTACTTCCACTCAATGAAGAAGCTCTTTGGTATTGATCCAGGAAGAGAA CACTATGGCTGCATGGTTGATCTTCTTGGAAGATCTGGAAAGCTAGATGAAGCGGTGAAA CTAATCCATGAAATGGGATGTGAACCAGATGCAGTGACATGGAGAACATTGCTTGGTGCC TGCAGAGTACATCGTAACATGGATTTAGCTGAGTATGCCGCCAAACAAATTATAAAGCTG GATCCAAGTGACGCGGGAACTTACATATTACTATCTAACATATATGCTCGTACTCAAAAA TGGGAAGACGTTATGGACCTGAGAAGGTCCATGAAGGAAAGAGGAGTAAAGAAGGAACCA GGGTGCAGCTGGATTGAAGTAAACAAACAAATCCATGCTTTTATAATGGGAGACAACTCT CATCCACAAAAAGAGGAAATCAACAAAGAGCTAAATCAGATTATTTGGAGATTAAAAGAG GTGGGATATGTTCCAGATACAAACTTTGTCTTGCAAGATCTTGAAGATGAACAGATGGAA GACTCACTTCTGTATCACAGTGAGAAAATAGCTGTTGCCTTTGGTATACTAAGCCTGTCT AGAGAGAAGACCATTAGAATCAGGAAAAATCTAAGGATATGTGGGGATTGTCATTTATTT GTGAAACTTTTGGCACAGATAGAGCATAGAAGCATTGTCATAAGAGATCCAATCAGGTAT CATCATTTTCAGGATGGTATTTGTTCTTGTGGAGATTATTGGTAG