Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g096190.2.1
CDS Infomation

Tryptophan synthase-related (AHRD V3.3 *** A0A0A9M6W8_ARUDO)
Sequence

ATGGCAGTATCCCTCCCAAATCTGTTTCCAAAAGGTGATGCGTATGGAACAAAGTATTTC
GAGATTAAAACAAAGCCAAGTCAATTGAAGCTTTCGTTTAGCTATAGAGCAAGAGCAAAG
GCAGCTCTTAATCCTCGTTCGAGTTCTGTTGAAATCCCTCGGCAGTGGTACAATCTAGTT
GCAGACCTTCCAATCAAACCACCTCCACCGTTGCATCCCAAGACGTTTCAGCCTATCAAA
CCGGAGGACTTATCTCCGCTTTTCTGTGATGAGTTGATTAAGCAGGAGGCAAGCATCGAC
CAGTTTATTGATATACCGGAAGAAGTTTTAGACGTCTACAGTCTTTGGCGCCCAACCCCT
TTGATTAGAGCAAAGAGGTTGGAAAAACTGCTTGATACACCCGCACGAATATATTACAAG
TATGAAGGTGGTAGCCCCGCGGGGTCGCACAAGCCCAACTCTGCTGTTCCTCAGGCCTGG
TACAATAAAATGGGGAATGTTAAAAATGTGGTTACGGAGACCGGGGCAGGTCAATGGGGG
AGCGCGTTGTCGTTTGCTTGCAGCTTATTTGGTCTCAATTGTGAGGTATGGCAAGTTCGA
GCTTCGTTTGATCAGAAACCTTATCGTAAGATGATGATGCAAACTTGGGGTGCGAAGGTG
CATCCTTCTCCTTCCGACCTTACAGAGGCCGGTCGGGCTATTCTACAAATGGATCCTTCA
AGTCCAGGAAGTTTAGGAATAGCTATTTCAGAGGCTGTGGAGGTTGCAGCGAAGAACGCT
GACACCAAGTATTGTTTGGGAAGTGTTCTGAATCATGTTTTGTTACATCAGACCGTTATC
GGTGAGGAGTGTATAAAACAGATGGAGGATTTCGGAGAGACTCCAGATGTGATCATCGGT
TGCACGGGAGGTGGATCTAATTTTGCAGGACTTGCTTTCCCGTTTATCCGGGAGAAGCTT
AAGGGGAGAATTAACCCTCTTATTAGAGCGGTTGAACCTACAGCTTGCCCCTCGTTGACG
AAAGGTGTGTATGCTTACGACTATGGAGACACCGCAGGCATGACTCCTTTAATGAAAATG
CATACACTTGGTCATGACTTCATACCGGATCCCATCCATTCCGGGGGTCTCCGTTACCAC
GGCATGGCACCACTGATATCACACGTCTATGAACTCGGATTCATGGAAGCAATATCAATT
CCGCAGATTGAATGTTTCCAAGGTGCTATTCAGTTTGCGAGGTCTGAGGGGTTGATACCA
GCACCAGAACCAACGCATGCTATAGCCGCTACTATAAGGGAAGCTCTAAGATGTAAAGAG
ACCGGAGAATCGAAAGTTATACTCATGGCAATGTGTGGACATGGACATTTTGATTTGTCA
TCTTACGATAAGTATTTGCAGGGAAGCATGGTTGATTTGTCCTTCTCAGAAGAGAAAATA
AAAGCCTCACTCGCGAAGATACCACAACCAGTATCATAA

Peptide Sequence

PEP ID

Solyc12g096190.2.1
PEP Infomation

Tryptophan synthase-related (AHRD V3.3 *** A0A0A9M6W8_ARUDO)
Sequence

MAVSLPNLFPKGDAYGTKYFEIKTKPSQLKLSFSYRARAKAALNPRSSSVEIPRQWYNLV
ADLPIKPPPPLHPKTFQPIKPEDLSPLFCDELIKQEASIDQFIDIPEEVLDVYSLWRPTP
LIRAKRLEKLLDTPARIYYKYEGGSPAGSHKPNSAVPQAWYNKMGNVKNVVTETGAGQWG
SALSFACSLFGLNCEVWQVRASFDQKPYRKMMMQTWGAKVHPSPSDLTEAGRAILQMDPS
SPGSLGIAISEAVEVAAKNADTKYCLGSVLNHVLLHQTVIGEECIKQMEDFGETPDVIIG
CTGGGSNFAGLAFPFIREKLKGRINPLIRAVEPTACPSLTKGVYAYDYGDTAGMTPLMKM
HTLGHDFIPDPIHSGGLRYHGMAPLISHVYELGFMEAISIPQIECFQGAIQFARSEGLIP
APEPTHAIAATIREALRCKETGESKVILMAMCGHGHFDLSSYDKYLQGSMVDLSFSEEKI
KASLAKIPQPVS*

Transcript Sequence

Transcript ID

Solyc12g096190.2.1
Transcript Infomation

Tryptophan synthase-related (AHRD V3.3 *** A0A0A9M6W8_ARUDO)
Sequence

TATCAAGTCAAATTACGTTCAATAAATCAAAACAATAAGGAAAAAAGATATTAATAATAA
GAAAAATGTATCACGTAAGTAAATTAATCGAGATAAGATTAAAAAGAAAAAAATGTTAGA
CTGACATTTTTTGTCTTCTATTTTTAGTAGTGTAGTAGTGTTTCAATATCCAATTTTCAA
CAAGCAAATCAGTGTAGAAATGGCAGTATCCCTCCCAAATCTGTTTCCAAAAGGTGATGC
GTATGGAACAAAGTATTTCGAGATTAAAACAAAGCCAAGTCAATTGAAGCTTTCGTTTAG
CTATAGAGCAAGAGCAAAGGCAGCTCTTAATCCTCGTTCGAGTTCTGTTGAAATCCCTCG
GCAGTGGTACAATCTAGTTGCAGACCTTCCAATCAAACCACCTCCACCGTTGCATCCCAA
GACGTTTCAGCCTATCAAACCGGAGGACTTATCTCCGCTTTTCTGTGATGAGTTGATTAA
GCAGGAGGCAAGCATCGACCAGTTTATTGATATACCGGAAGAAGTTTTAGACGTCTACAG
TCTTTGGCGCCCAACCCCTTTGATTAGAGCAAAGAGGTTGGAAAAACTGCTTGATACACC
CGCACGAATATATTACAAGTATGAAGGTGGTAGCCCCGCGGGGTCGCACAAGCCCAACTC
TGCTGTTCCTCAGGCCTGGTACAATAAAATGGGGAATGTTAAAAATGTGGTTACGGAGAC
CGGGGCAGGTCAATGGGGGAGCGCGTTGTCGTTTGCTTGCAGCTTATTTGGTCTCAATTG
TGAGGTATGGCAAGTTCGAGCTTCGTTTGATCAGAAACCTTATCGTAAGATGATGATGCA
AACTTGGGGTGCGAAGGTGCATCCTTCTCCTTCCGACCTTACAGAGGCCGGTCGGGCTAT
TCTACAAATGGATCCTTCAAGTCCAGGAAGTTTAGGAATAGCTATTTCAGAGGCTGTGGA
GGTTGCAGCGAAGAACGCTGACACCAAGTATTGTTTGGGAAGTGTTCTGAATCATGTTTT
GTTACATCAGACCGTTATCGGTGAGGAGTGTATAAAACAGATGGAGGATTTCGGAGAGAC
TCCAGATGTGATCATCGGTTGCACGGGAGGTGGATCTAATTTTGCAGGACTTGCTTTCCC
GTTTATCCGGGAGAAGCTTAAGGGGAGAATTAACCCTCTTATTAGAGCGGTTGAACCTAC
AGCTTGCCCCTCGTTGACGAAAGGTGTGTATGCTTACGACTATGGAGACACCGCAGGCAT
GACTCCTTTAATGAAAATGCATACACTTGGTCATGACTTCATACCGGATCCCATCCATTC
CGGGGGTCTCCGTTACCACGGCATGGCACCACTGATATCACACGTCTATGAACTCGGATT
CATGGAAGCAATATCAATTCCGCAGATTGAATGTTTCCAAGGTGCTATTCAGTTTGCGAG
GTCTGAGGGGTTGATACCAGCACCAGAACCAACGCATGCTATAGCCGCTACTATAAGGGA
AGCTCTAAGATGTAAAGAGACCGGAGAATCGAAAGTTATACTCATGGCAATGTGTGGACA
TGGACATTTTGATTTGTCATCTTACGATAAGTATTTGCAGGGAAGCATGGTTGATTTGTC
CTTCTCAGAAGAGAAAATAAAAGCCTCACTCGCGAAGATACCACAACCAGTATCATAAGT
TGATCCAAGTCGAGGAGACGATGAAAATAGGAGGTACGTAGTGGAATTTGGTTTGTACTT
TTCTCCACGAATAATGTTTTCGTAGTTCTGCCAAGTTGAAGAATAACATGCCCCCAACCC
CCTCAATCTTTTGATCGAATAATATTCGATACAATTAGTTGTAGCTTTGTAAGTTGTTGT
GTGGCCTTCAACTTTTCGAGTTGTGTGTAATCATCTATATGATTGACTTGACAACAATGA
AGGATCTGGGAGTGGCATTTCATCATTTTGTGCTAAGTTTTGTCGATTTTTTTAATAAAA
AATTTCGATCTCTACTAATGTATCGTTCAATATCTGTTCATTGGACATAGTAGCTGAGGT
TCTCATCCTTTGCAGATGAGCAATGTTATCTTTATA