Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g096170.2.1
CDS Infomation

Embryo defective 3006, putative isoform 2 (AHRD V3.3 *** A0A061G7I3_THECC)
Sequence

ATGGAGAAAACGAAGGAAGAAATTGCAGGAACAAGGCAGACGAATTTGAAAACTGCATTT
GAGCTTGGAATTCACTCTTTGTTAACTTCATGTTCTAAAGAGGGATTTTGTAAAGCTTTC
CCTAATTTTGCTCCAGCAGAAGTTGAACGCCTTCATCGGTTGTTCATTCAGGTGATTACT
TCTTTGCATGAGGATATAGAGGATGAATTTGAGTCTTTATGTGTGGAGACACAGGCAGGA
TCAACTCTCAACATGGTGGAGCAGCTTGTGGAAGAACAAAACTTGGACCCTTTGTTTCCA
GAGAAAAGCAATGTTGAAGAAGTCAGGCACTTCCTATCAGAAGCAAAACAGAATGAGATC
AACTACTTGACGACTATGTTGGAGACGGCAGAAGAACAGAAACGCTCCATCACTTCTCGT
CTTGAAACCCTGAAGAAACAAAGACATGATTTCTCTGATGCTGCTGCTACAGACATTGTC
AATAAGATACGAACTGGGAATCAGAAGTACAATACGAACAACAATATTGGCTTCCATAAT
TGA

Peptide Sequence

PEP ID

Solyc12g096170.2.1
PEP Infomation

Embryo defective 3006, putative isoform 2 (AHRD V3.3 *** A0A061G7I3_THECC)
Sequence

MEKTKEEIAGTRQTNLKTAFELGIHSLLTSCSKEGFCKAFPNFAPAEVERLHRLFIQVIT
SLHEDIEDEFESLCVETQAGSTLNMVEQLVEEQNLDPLFPEKSNVEEVRHFLSEAKQNEI
NYLTTMLETAEEQKRSITSRLETLKKQRHDFSDAAATDIVNKIRTGNQKYNTNNNIGFHN
*

Transcript Sequence

Transcript ID

Solyc12g096170.2.1
Transcript Infomation

Embryo defective 3006, putative isoform 2 (AHRD V3.3 *** A0A061G7I3_THECC)
Sequence

TGAAAATCGACGAAATATAAAAAGAAGATAAAAGCGGTAATCTTTTTCAAAAAATAACCT
AATTTTTTCAATCTCCCGCCATTGCTGAAGAAATGGAGAAAACGAAGGAAGAAATTGCAG
GAACAAGGCAGACGAATTTGAAAACTGCATTTGAGCTTGGAATTCACTCTTTGTTAACTT
CATGTTCTAAAGAGGGATTTTGTAAAGCTTTCCCTAATTTTGCTCCAGCAGAAGTTGAAC
GCCTTCATCGGTTGTTCATTCAGGTGATTACTTCTTTGCATGAGGATATAGAGGATGAAT
TTGAGTCTTTATGTGTGGAGACACAGGCAGGATCAACTCTCAACATGGTGGAGCAGCTTG
TGGAAGAACAAAACTTGGACCCTTTGTTTCCAGAGAAAAGCAATGTTGAAGAAGTCAGGC
ACTTCCTATCAGAAGCAAAACAGAATGAGATCAACTACTTGACGACTATGTTGGAGACGG
CAGAAGAACAGAAACGCTCCATCACTTCTCGTCTTGAAACCCTGAAGAAACAAAGACATG
ATTTCTCTGATGCTGCTGCTACAGACATTGTCAATAAGATACGAACTGGGAATCAGAAGT
ACAATACGAACAACAATATTGGCTTCCATAATTGATACTGGCCTCGTCTGATGCATCCTA
TCCGCCCTTAGTCCTGCGTCTACTCGAGAAGATGGATTAAACTAGAGACTATCAGAACTT
CCATTTCAATGTGCCTGTGAAATCTAAAGTAAATTAGTTGCATTTGCTTTCAATTTCAAG
CAAGTAAACAAGGTTGTTTATTTCTTGTTCACTTAAAATGCTTGTATATGACATTTGTAT
GTCATTAATTAAAGCACTAGAATAAGTGAAAGGACTACTAGTTTCATCTCTTTTATACAT
GCATAGAACAACAATTTTAC