Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g095930.2.1
CDS Infomation

Serine hydroxymethyltransferase (AHRD V3.3 *** M1CVE4_SOLTU)
Sequence

ATGGAGGCTTGTAGCCGAGCTGCAGTGATGGGTTCTTCTCTTCAGCAACCTGTTTGGGTT
AAGGGATCGGCTTTCCCTTTAAAGGGTGAAGTGAAACTTAATGGGGTCAGATTATGGTTT
GTTAAGCCTTGCAAAGCCTCTCAACTTGATGGGAGCTTGGTTTCAGGAAGGCCTCCTTCT
TCTGTTTCTGTTCCTATCCCAGAAATGGGAGGTGCTGGGAACAACTTTGTAGATTATGGA
TTGGGTGAAGCTGATCCTGAAGTCCGTGGTATTATTGACAAAGAGAAGGAACGCCAATTT
CGTAGCTTAGAGCTTATTGCCTCTGAGAATTTCACATCTCGAGCAGTGATGGAGGCGGTG
GGTTCTTGCCTTACAAACAAATACTCCGAAGGACTACCAGGCAAAAGATATTATGGTGGA
AACGAGTACATTGACGAGTTAGAAATACTCTGTCAAGAGAGGGCTTTGGCAGCCTTTAAC
TTAGATGGGAAACAGTGGGGTGTCAATGTTCAACCCCTATCTGGTTCTCCAGCAAATTTT
GAAGTCTACACAGCAGTTCTCAATCCACATGACCGGATTATGGGATTGGACTTGCCTCAT
GGGGGTCATTTGTCCCATGGATTCATGACTCCTAAAAGACGAGTTTCAGGCACATCTATT
TACTTTGAGTCCATGCCTTACCGCCTTGATGAATCTTCAGGACTTGTTGATTATGACATG
CTTGAGAAAACTGCAACCCTTTTTCGGCCAAAACTTATTATTGCTGGTGCTAGTGCATAT
CCACGAGATTTTGATTATCCTCGCATGAGAAAGATAGCAGATGCTGTTGGAGCCTTTCTC
ATGATGGATATGGCTCACATTAGTGGGCTTGTTGCCGCCTCTGTAGTTGCTAATCCATTT
GAATACTGTGACATTGTTACCACAACAACTCACAAGTCTCTAAGAGGTCCTAGAGGAGGA
ATGATCTTCTTCAAGAAAGATCCTGTCCTAGGCGTTGATTTGGAATCTGCCATCAACAAT
GCTGTTTTTCCTGGCTTGCAGGGTGGTCCACACAATCACACAATTGGAGGACTAGCTGTT
TGCTTGAAGCATGCCAAATCACCTGATTTCAAGGCTTATCAGAACAAGGTGGTCTCTAAC
TGTAGAGCTCTTGCAAGCCGGTTAACGGAGTTGGGGTACAAGCTGGTCTCTGGAGGAACT
GACAATCATTTGGTCCTAGTTGATCTTAGGCCCTTGGGTACTGATGGTGCTAGAGTGGAG
AAAATACTTGACATGGCATCAATCACGCTCAATAAGAATTCAGTAGCCGGTGATAAAAGT
GCACTAGTGCCTGGTGGTATACGCATAGGCTCACCTGCAATGACAACTCGAGGTTTCTCA
GAGAAGGAATTTGTAACCGTTGCAGACCTTATTAACGAGGGTGTGCAGATAACTCTTGAG
GCCAAGAACTTAGTCTCTGGTTCTAAACTCCAAGACTTCATGAAGTTTGTTACTTCACCG
GAGTTTCCTTTGATCGATAAGGTGCTGGATCTACAAAGAAGAGTTGAAGCTTTGACAATC
CAATATCCATTGCCTGGCTTGTGA

Peptide Sequence

PEP ID

Solyc12g095930.2.1
PEP Infomation

Serine hydroxymethyltransferase (AHRD V3.3 *** M1CVE4_SOLTU)
Sequence

MEACSRAAVMGSSLQQPVWVKGSAFPLKGEVKLNGVRLWFVKPCKASQLDGSLVSGRPPS
SVSVPIPEMGGAGNNFVDYGLGEADPEVRGIIDKEKERQFRSLELIASENFTSRAVMEAV
GSCLTNKYSEGLPGKRYYGGNEYIDELEILCQERALAAFNLDGKQWGVNVQPLSGSPANF
EVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESSGLVDYDM
LEKTATLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVANPF
EYCDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAV
CLKHAKSPDFKAYQNKVVSNCRALASRLTELGYKLVSGGTDNHLVLVDLRPLGTDGARVE
KILDMASITLNKNSVAGDKSALVPGGIRIGSPAMTTRGFSEKEFVTVADLINEGVQITLE
AKNLVSGSKLQDFMKFVTSPEFPLIDKVLDLQRRVEALTIQYPLPGL*

Transcript Sequence

Transcript ID

Solyc12g095930.2.1
Transcript Infomation

Serine hydroxymethyltransferase (AHRD V3.3 *** M1CVE4_SOLTU)
Sequence

TGCATAAGTCTAACCAACTATCGAATTTTATACTTAACAAAATCCAATATTCAGCGCGCG
CTTTCCCATATAAGATGCAGCTTAGCTAGGGTTTACTTTTTTGCTTCTTTCATCTTCTCT
ATTATAAAGCACTTTATTCAAAGCTTGAAAAAACAGAGCATCAAAGGATATCTATATCTA
ATAGGAGTTGGTGGTTTACATAGAGGCTGTATACAAGTATTATAAGTTTAATATGGAGGC
TTGTAGCCGAGCTGCAGTGATGGGTTCTTCTCTTCAGCAACCTGTTTGGGTTAAGGGATC
GGCTTTCCCTTTAAAGGGTGAAGTGAAACTTAATGGGGTCAGATTATGGTTTGTTAAGCC
TTGCAAAGCCTCTCAACTTGATGGGAGCTTGGTTTCAGGAAGGCCTCCTTCTTCTGTTTC
TGTTCCTATCCCAGAAATGGGAGGTGCTGGGAACAACTTTGTAGATTATGGATTGGGTGA
AGCTGATCCTGAAGTCCGTGGTATTATTGACAAAGAGAAGGAACGCCAATTTCGTAGCTT
AGAGCTTATTGCCTCTGAGAATTTCACATCTCGAGCAGTGATGGAGGCGGTGGGTTCTTG
CCTTACAAACAAATACTCCGAAGGACTACCAGGCAAAAGATATTATGGTGGAAACGAGTA
CATTGACGAGTTAGAAATACTCTGTCAAGAGAGGGCTTTGGCAGCCTTTAACTTAGATGG
GAAACAGTGGGGTGTCAATGTTCAACCCCTATCTGGTTCTCCAGCAAATTTTGAAGTCTA
CACAGCAGTTCTCAATCCACATGACCGGATTATGGGATTGGACTTGCCTCATGGGGGTCA
TTTGTCCCATGGATTCATGACTCCTAAAAGACGAGTTTCAGGCACATCTATTTACTTTGA
GTCCATGCCTTACCGCCTTGATGAATCTTCAGGACTTGTTGATTATGACATGCTTGAGAA
AACTGCAACCCTTTTTCGGCCAAAACTTATTATTGCTGGTGCTAGTGCATATCCACGAGA
TTTTGATTATCCTCGCATGAGAAAGATAGCAGATGCTGTTGGAGCCTTTCTCATGATGGA
TATGGCTCACATTAGTGGGCTTGTTGCCGCCTCTGTAGTTGCTAATCCATTTGAATACTG
TGACATTGTTACCACAACAACTCACAAGTCTCTAAGAGGTCCTAGAGGAGGAATGATCTT
CTTCAAGAAAGATCCTGTCCTAGGCGTTGATTTGGAATCTGCCATCAACAATGCTGTTTT
TCCTGGCTTGCAGGGTGGTCCACACAATCACACAATTGGAGGACTAGCTGTTTGCTTGAA
GCATGCCAAATCACCTGATTTCAAGGCTTATCAGAACAAGGTGGTCTCTAACTGTAGAGC
TCTTGCAAGCCGGTTAACGGAGTTGGGGTACAAGCTGGTCTCTGGAGGAACTGACAATCA
TTTGGTCCTAGTTGATCTTAGGCCCTTGGGTACTGATGGTGCTAGAGTGGAGAAAATACT
TGACATGGCATCAATCACGCTCAATAAGAATTCAGTAGCCGGTGATAAAAGTGCACTAGT
GCCTGGTGGTATACGCATAGGCTCACCTGCAATGACAACTCGAGGTTTCTCAGAGAAGGA
ATTTGTAACCGTTGCAGACCTTATTAACGAGGGTGTGCAGATAACTCTTGAGGCCAAGAA
CTTAGTCTCTGGTTCTAAACTCCAAGACTTCATGAAGTTTGTTACTTCACCGGAGTTTCC
TTTGATCGATAAGGTGCTGGATCTACAAAGAAGAGTTGAAGCTTTGACAATCCAATATCC
ATTGCCTGGCTTGTGATGAAACACTGGTGGAGATTTTTCAGTAGCAAACTGGTTGTATGA
ATAGTATAACAGGCAGATTCTTGACAGTTGATAATGTAGGATGATTGCATGCAAATGCTG
TATTTCCATCCCCACCTCCCTTTGGGATTTAAAATGGAAAAAAGTGATCCAAAATTTTGA
AAATGTGGAGGAAATATATTTGGTAAATGTTTTTTCTACGAATTTTTATCCCTTTTTTGT
TCAAGCTTTTTATGAAGAACAAAAAATAAGCTTTTTTTCCATTGAAGGAGCAAACACAAT
GTACAAGAAACTAGTGTTAGTTTTTATTCTGAAGTGGAGTT