Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g095800.2.1
CDS Infomation

DnaJ protein family-like (AHRD V3.3 *** Q7F1J8_ORYSJ)
Sequence

ATGGTGAAGGAGACTGAATATTATGACATTTTGGGGGTTAGCCCTACTGCTACCGAATCT
GAGATTAAGAAAGCATACTACATTAAGGCACGACAGGTTCATCCTGATAAAAATCCAAAT
GACCCTCTAGCTGCACAGAATTTTCAGGTGTTGGGAGAGGCTTATCAGGTACTGAGCGAT
CCATCTCAACGGCAGGCTTATGATGCACATGGAAAATCAGGAATTTCAACAGATGCAATC
ATTGATCCTGCAGCAATTTTTGCTATGCTTTTCGGAAGTGAACTTTTTGAGGAGTACATA
GGTCAGCTTGCTATGGCATCAATGGCTTCATTGGATATTTTCACTGAAGGTGAAGATTTT
GATGCTAGAAAGTTACAAGAGAAAATGAGGGTTGTTCAGAGGGAGAGGGAAGAAAAGCTT
GCTGAAACTTTGAAGGACCGGCTCAATGTATATGTACAAGGAAATAAAGAGGACTTTGTT
CGTCATGCAGAAGCTGAGGTGTCGAGGCTTTCAAATGCAGCTTATGGTGTTGATATGTTA
AACACAATTGGGTACATATATGCAAGACAGTCAGCGAAAGAGCTTGGAAAGAAGGCATTA
TATTTGGGTGTGCCTTTTATTGCTGAGTGGTTCAGAAACAAAGGCCATTTTATCAAATCC
CAAGTAACTGCTGCAACAGGTGCAATTGCTTTGATTCAGCTGCAAGAGGACATGAAAAGG
CAGCTCAGTGCAGAAGGAAATTACACTGAGGAAGAACTTGAAGAGTACATGCAATCCCAC
AAAAAGCTAATGATTGATTCTCTCTGGAAGCTTAATGTAGCAGATATTGAAGCCACTCTT
TCTCGTGTTTGTCAAATGGTTCTACAAGACAACAACGTAAAGAAAGAAGAGCTTCGTGCC
CGCGCAAAGGGGTTAAAGACTCTCGGCAAAATTTTTCAGAAGGTTAAGCCAGTCAATGAA
GTCGAAACTACAGAAAATGGCGTCCATAAGCTGGACGGAAATGAACCAAGCTATGACTCT
CGTTCTTCAACTGCATCAGTACCATCTCAAAACAAAGAAGAGGTGCCTTATACAGTATTT
GCATCACAGAGCCCATACGTGGAGGCTCCACAGTTTACCGGTGGTCAATCCAGCTATAAC
TTCCCCATGCCGACTGCACCACCAGGTGCGCAGAGACACAGGTAG

Peptide Sequence

PEP ID

Solyc12g095800.2.1
PEP Infomation

DnaJ protein family-like (AHRD V3.3 *** Q7F1J8_ORYSJ)
Sequence

MVKETEYYDILGVSPTATESEIKKAYYIKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSD
PSQRQAYDAHGKSGISTDAIIDPAAIFAMLFGSELFEEYIGQLAMASMASLDIFTEGEDF
DARKLQEKMRVVQREREEKLAETLKDRLNVYVQGNKEDFVRHAEAEVSRLSNAAYGVDML
NTIGYIYARQSAKELGKKALYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKR
QLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNVKKEELRA
RAKGLKTLGKIFQKVKPVNEVETTENGVHKLDGNEPSYDSRSSTASVPSQNKEEVPYTVF
ASQSPYVEAPQFTGGQSSYNFPMPTAPPGAQRHR*

Transcript Sequence

Transcript ID

Solyc12g095800.2.1
Transcript Infomation

DnaJ protein family-like (AHRD V3.3 *** Q7F1J8_ORYSJ)
Sequence

AATCAAAATTTCAAAGAGAGAGAGGGGCCCGAAGCCAACACAGCATGAATCATCAATTTC
CATCTTGCACTTTATTCATCACAATCTCAAATTTACAGTCCCTTTCGGTTTGTTAGAGGA
AAAAAATTGAATTTTTTCTTCTATTTTTGTACGTGGAATTGATGTTTTCTGTTCTTCGAT
CCCCTTTTTTTCGAACTTCATAGCAGTTTCATTGTTTTAATCTCTTAAATTGCTGACCCT
TTCGGTTTGTTAGAGGAAAAATTTGATCTTTTTTTTTTTTTTGATTTTGTACGTGGGGTT
GTTGTTTCCTGTTCTTAGATCCCCTTTTTTGCTGACCCTTTTGGTTTGTTTAGAGGAAAA
ATTCGATCTTTTCTTCGATTTTTTGTACGTGGGGTTGTTGTTTTCTGTTCTTCGATTCCC
CTTTTTTGCTGACCCTTTTGGTTTGTTAGAGGAAAAATTCGATCTTGGGATTTGTATTTT
CTGTTTTTCAACTTGATAGCAGTTTCATCACCATAATCTCATAGATTTACTGGTTTTGTT
AGAGGAAGCCGATTGAACTTTTCTCTTTGATTTTGTACGTGGGGTTTGGCATTTCGTGAT
CATTTATCCTTTTTGTCAACTTGATAGCAGTTAAATAACCGCACCTGGGTGGTTTTCAGT
TTCAAATTTTATTTTCTGTTTTCCTTCTATCATTTGGTCAATTTGAAAGGAAGGCGAAAA
GATTTCGAGATCATGGTGAAGGAGACTGAATATTATGACATTTTGGGGGTTAGCCCTACT
GCTACCGAATCTGAGATTAAGAAAGCATACTACATTAAGGCACGACAGGTTCATCCTGAT
AAAAATCCAAATGACCCTCTAGCTGCACAGAATTTTCAGGTGTTGGGAGAGGCTTATCAG
GTACTGAGCGATCCATCTCAACGGCAGGCTTATGATGCACATGGAAAATCAGGAATTTCA
ACAGATGCAATCATTGATCCTGCAGCAATTTTTGCTATGCTTTTCGGAAGTGAACTTTTT
GAGGAGTACATAGGTCAGCTTGCTATGGCATCAATGGCTTCATTGGATATTTTCACTGAA
GGTGAAGATTTTGATGCTAGAAAGTTACAAGAGAAAATGAGGGTTGTTCAGAGGGAGAGG
GAAGAAAAGCTTGCTGAAACTTTGAAGGACCGGCTCAATGTATATGTACAAGGAAATAAA
GAGGACTTTGTTCGTCATGCAGAAGCTGAGGTGTCGAGGCTTTCAAATGCAGCTTATGGT
GTTGATATGTTAAACACAATTGGGTACATATATGCAAGACAGTCAGCGAAAGAGCTTGGA
AAGAAGGCATTATATTTGGGTGTGCCTTTTATTGCTGAGTGGTTCAGAAACAAAGGCCAT
TTTATCAAATCCCAAGTAACTGCTGCAACAGGTGCAATTGCTTTGATTCAGCTGCAAGAG
GACATGAAAAGGCAGCTCAGTGCAGAAGGAAATTACACTGAGGAAGAACTTGAAGAGTAC
ATGCAATCCCACAAAAAGCTAATGATTGATTCTCTCTGGAAGCTTAATGTAGCAGATATT
GAAGCCACTCTTTCTCGTGTTTGTCAAATGGTTCTACAAGACAACAACGTAAAGAAAGAA
GAGCTTCGTGCCCGCGCAAAGGGGTTAAAGACTCTCGGCAAAATTTTTCAGAAGGTTAAG
CCAGTCAATGAAGTCGAAACTACAGAAAATGGCGTCCATAAGCTGGACGGAAATGAACCA
AGCTATGACTCTCGTTCTTCAACTGCATCAGTACCATCTCAAAACAAAGAAGAGGTGCCT
TATACAGTATTTGCATCACAGAGCCCATACGTGGAGGCTCCACAGTTTACCGGTGGTCAA
TCCAGCTATAACTTCCCCATGCCGACTGCACCACCAGGTGCGCAGAGACACAGGTAGACA
GACAAATGGTGGACGCCGCAAGAATTTGTGTAGCTTGTGAATTTGTAGTGAGTTTGAGTT
TCTTATGTATCCCTAGTGTGCTATATTTAAAGCATAATTCTTGCTTAGCAGAGAAAAGCT
TCTGTCATATTGCTTTTTATGAAGGACTGCTTTGTAATTAATATAGTTATTAGAGTGTAA
GTTGTGTGGCCTGTGAATGCAAAATATTGTATATTGCATTGGTCTATTCTTCTTGTTTGT
TGTATTAACCAATTTAATGTTTTTGTTATTGACCTATTTTGCCAACTCCCTAGTTAGTGT
CTTTTTGTACTTAAAAGAGTACTTTCTTGCTGGCCTTGCTAGAAACATAGTGATAGTGAC
TTTCTAATTAATTGCTATTTGCTACAATGATTGAAAGTGGT