Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g094550.2.1
CDS Infomation

At1g76250 (AHRD V3.3 *** Q8GX25_ARATH)
Sequence

ATGAATGAAACTCGAAATACGACGAATATTTTGAGAAATCCTTCAAAATTTCTTCATCGG
TGTAGTAAATGGATTTCAGATCTAAATTTGAACAAGTTATTGTTGATATTACCATCAATT
TTGTTTATTGTTTATGTGTTTTACTCTTCTGTTGTTGGTGGAGGAAGAAGTACTGTTGTA
GTGTTCAATCCTTTCTCAAATTCAAAATCAACTACCAGTTACGTTCCCGGAGATGGATAT
GATTTTCCGGCGAGATTTGCAGATGAATCGGAGAAGAAACGGAGGAAGGAGGAGCTGGAT
CGATCGAGAATAGCTGTGTGTTTAGTAGGTGGGGCCCGTAGGTTTGAACTTACTGGGCCT
TCAATTATACAGAAAATTTTAAAAGTTTATCCGAATTCTGATCTGTTTCTTCATAGTCCA
TTGGATTCTAAAGCTTATAAGCTTTCATTGTTGAAATCTGTTCGGAGAATCGCCGCCGTT
AGGATTTTCCGGCCACAATATATACCGGAAACTGAGTCACAAGTTCGAGTTCTAACAGCT
CAAAATTCACCTAATGGAATACAGGGGTTGCTGCAATATTTCAATTTGGTAGAAGGTTGT
TTGACAATGATCCAAGACTATCAAAAGCAGAACAACTTCACATACGACTGGATAGTCCGA
ACTCGAGTTGATGGCTACTGGTCTTCACCACTAGGCCCCGAAAACTTCATCCCCGGGCGT
TACCTCGTCCCTCCAGGTTCCTCCTACGGAGGCCTGAACGATCGTTTTGGCGTTGGTGAC
TACAACACATCGGTGATTGCTCTTTCGAGGCTCTCCATGATACCCCAGCTTGATTTAGCA
GGGCGTATTCAGCTCAACTCAGAAAGTGCATTCAAAGCCCAACTTACAACTCAACAAGTC
CCTTACCTAACTATGCGCCTTCCCTTTTGTGTAGTAACGGATCGTCAGTACGAATTTCCA
CCATCCCATTATGGCGTACCGGTTGCAGCACTTTCTAGTCGAGGCCCCCTGAGTGGGGCC
AAATGCCGGCCGTGCACGCCCGTGTGCACCGGGTCATGCGTTGAGGTTGCCATGAATAGA
CTAGATAAAGGATGGAGTTGGACGGATTGGGCCAATAACTCTCTCGAGCTATGCGATGCT
CACGCTGAATGGGAGAGCGGGTGGGAGAGAGTTTTCGACAGAGTGGCGGGGAAAAAGCTT
GCTGCAGCTAGAAGAAGGATTGATGGAATGAAATTAGATCAATGTATTAGGGAATTTGCT
GAGATGAAGAATAAAACTTCACGTTGGGAGGCTCCATCAGGTACAGAAATTTGTAGTTTA
GGTTTGTTGGACACTCCCCAAAGCTAA

Peptide Sequence

PEP ID

Solyc12g094550.2.1
PEP Infomation

At1g76250 (AHRD V3.3 *** Q8GX25_ARATH)
Sequence

MNETRNTTNILRNPSKFLHRCSKWISDLNLNKLLLILPSILFIVYVFYSSVVGGGRSTVV
VFNPFSNSKSTTSYVPGDGYDFPARFADESEKKRRKEELDRSRIAVCLVGGARRFELTGP
SIIQKILKVYPNSDLFLHSPLDSKAYKLSLLKSVRRIAAVRIFRPQYIPETESQVRVLTA
QNSPNGIQGLLQYFNLVEGCLTMIQDYQKQNNFTYDWIVRTRVDGYWSSPLGPENFIPGR
YLVPPGSSYGGLNDRFGVGDYNTSVIALSRLSMIPQLDLAGRIQLNSESAFKAQLTTQQV
PYLTMRLPFCVVTDRQYEFPPSHYGVPVAALSSRGPLSGAKCRPCTPVCTGSCVEVAMNR
LDKGWSWTDWANNSLELCDAHAEWESGWERVFDRVAGKKLAAARRRIDGMKLDQCIREFA
EMKNKTSRWEAPSGTEICSLGLLDTPQS*

Transcript Sequence

Transcript ID

Solyc12g094550.2.1
Transcript Infomation

At1g76250 (AHRD V3.3 *** Q8GX25_ARATH)
Sequence

ATTTTTTTTAGAAGCATTCAACGTTTACTTCATGATTCAACAATATGGAAAAAGCAAAGG
AAATTTCTCCTTTCAATGAATAGTTGTTGAAAAGTTCATTGTTAAATTCAATTTTCTGCG
AATAAATTTCTAGTTGAAGATGAATGAAACTCGAAATACGACGAATATTTTGAGAAATCC
TTCAAAATTTCTTCATCGGTGTAGTAAATGGATTTCAGATCTAAATTTGAACAAGTTATT
GTTGATATTACCATCAATTTTGTTTATTGTTTATGTGTTTTACTCTTCTGTTGTTGGTGG
AGGAAGAAGTACTGTTGTAGTGTTCAATCCTTTCTCAAATTCAAAATCAACTACCAGTTA
CGTTCCCGGAGATGGATATGATTTTCCGGCGAGATTTGCAGATGAATCGGAGAAGAAACG
GAGGAAGGAGGAGCTGGATCGATCGAGAATAGCTGTGTGTTTAGTAGGTGGGGCCCGTAG
GTTTGAACTTACTGGGCCTTCAATTATACAGAAAATTTTAAAAGTTTATCCGAATTCTGA
TCTGTTTCTTCATAGTCCATTGGATTCTAAAGCTTATAAGCTTTCATTGTTGAAATCTGT
TCGGAGAATCGCCGCCGTTAGGATTTTCCGGCCACAATATATACCGGAAACTGAGTCACA
AGTTCGAGTTCTAACAGCTCAAAATTCACCTAATGGAATACAGGGGTTGCTGCAATATTT
CAATTTGGTAGAAGGTTGTTTGACAATGATCCAAGACTATCAAAAGCAGAACAACTTCAC
ATACGACTGGATAGTCCGAACTCGAGTTGATGGCTACTGGTCTTCACCACTAGGCCCCGA
AAACTTCATCCCCGGGCGTTACCTCGTCCCTCCAGGTTCCTCCTACGGAGGCCTGAACGA
TCGTTTTGGCGTTGGTGACTACAACACATCGGTGATTGCTCTTTCGAGGCTCTCCATGAT
ACCCCAGCTTGATTTAGCAGGGCGTATTCAGCTCAACTCAGAAAGTGCATTCAAAGCCCA
ACTTACAACTCAACAAGTCCCTTACCTAACTATGCGCCTTCCCTTTTGTGTAGTAACGGA
TCGTCAGTACGAATTTCCACCATCCCATTATGGCGTACCGGTTGCAGCACTTTCTAGTCG
AGGCCCCCTGAGTGGGGCCAAATGCCGGCCGTGCACGCCCGTGTGCACCGGGTCATGCGT
TGAGGTTGCCATGAATAGACTAGATAAAGGATGGAGTTGGACGGATTGGGCCAATAACTC
TCTCGAGCTATGCGATGCTCACGCTGAATGGGAGAGCGGGTGGGAGAGAGTTTTCGACAG
AGTGGCGGGGAAAAAGCTTGCTGCAGCTAGAAGAAGGATTGATGGAATGAAATTAGATCA
ATGTATTAGGGAATTTGCTGAGATGAAGAATAAAACTTCACGTTGGGAGGCTCCATCAGG
TACAGAAATTTGTAGTTTAGGTTTGTTGGACACTCCCCAAAGCTAAAAAGAAGGAACCCG
TCCTTTCGAGCTTCTAGTTCTTCTGGATTGCAACCCACGAGGGCACTCTAGAGCAACCTT
TGAACGCGTTCCGCCTTATTATTTAGTGTATCGAGTTACATATTGTTTATTTCTTGAAAA
AAAAAAAGTCCATTTACACATAGTAGGATTCTTAATAGTTCTTAGTATAACTGATTCAAG
TGTTAGGCTCTACTGAATAATGAAATATAGCATCACTTTGGTACCTATATTTGCTTTTAT
GTATATGTTTTTTACTTGTGTCGAACAACATATAACATTCATAAATTCAAATATAAGAAA
CGAAACGTGACAAAGTAAATACGCAACAAATTCTCAAATAAAACTTCATCCATCAAATTC
TATATCTATACTGTTTCTACGTAAATTTGAAATAGTCGGATTCTAATATCTTCGAGTAGA
AGCAGCACCTACATTCAAGTGCTTAGCAATTTCAGAAGAAACACATCAAGACAAGCATAT
TGGATTTGATTCAAACTCAACCATTCACTATCCCATCTACCCATAGTAACAGATTTTGGC
TTAACAATCTCCTTTTCCAGAACGACATTGCATAGTTCCTTCAACCCAGCATTCTTCAAA
TTCTTCATACCATATACATCAGCAGCAATTCCTCTCAAATCCACCATATTCTTAACATTC
AGCTCATAATCCTCCAACAATTTCTCCACATCGCTTTCAATTCCAATTCCGACGAAATCA
TACTCACGATTCCCGAGAAAATTGAACAGAGACTCCGGGATTGATCGACAGTAGAGGAGT
TGGATAATGAGGCAACGACGATCGACGCAGATCTGGAGAACGGCGGCCGGGTTTTGCTGG
TTACGGTTGAAGTTAGGACGCCATTCAACGTCAAGTCCGGCGATGAGACGGCGATTGCCG
GAGTGAGAAGATACAGTTTCGGAGATCCACTGGGTGATGATATCGGGATCGGGAGTTACC
GTTGTTTTGATTACATCGCTGTGGAAGTGAACGTCGAAGAGGTCATACCGATTGTCTTGC
TCCTCTTTGTCGACGATACGGAGATTCATGGCGGCGATTTCACCGGCGTAGAGCTGAGAG
AAATCGCCGGCGAGGTTTTTGACTAAAAAGAGAAATTGAGTGGACTTGATGTGAAAATAT
TGTTAACAGTAGGGATTAAATACTAATTTTCATACTTTGACTAAATTTTTAGCTAAAATT
GCCCCTCATTTATGACTGCAAATCTATCTTGATCTATTAAATATAATTATGAGTCTTTTT
TAACCCTAAAGTTTTTTTAAACTCATAATTTTACCATAATGTTTTATTTTGTGAAATAAA
TCAATTAAGTTTGAAGATACGAGTTTTGCCTCATTACTTTAAATCTTGATGAACATATAA
TAAAATGTTAACCACATTTTGTATTGATATACAAATCAATAAATATATAAAATATGTTTC
ATTGTATAAAGT