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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g094440.2.1
CDS Infomation

High mobility group family (AHRD V3.3 *** E5GCD0_CUCME)
Sequence

ATGTCTCAGACAGGTTTAATTTCTCCCGATGCGGTAAAAAGAGAGATGAATCCTCAACCA
ATGGCGTCTCACCAGAAGATTGTGAATAATCCGACTCTGTTTTGGGAATGTCTCAGGAAT
TTTCACTCTGCTGTGGGCGCAAAGGACACGGTTCCTGTGATTGGAGGGAAGGATCTTGAT
TTGCATGTTCTCTATGTTGAGGTGACTAAAAGGGGTGGCTTTAACAAGGTAGTGGCAGAT
AAGAAATGGAGAGAAGTGAGTTCAATTTTCAAGTTTTCTCCAACAACAACAAGTGCTTCA
TATGCATTGAGGAAACATTATTTCACTTTGCTTCATCACTTTGAACAAGTTTATTTTTTC
AAACATGAAGTTCCTATGTTTGATGAAGGTTCATGCTTCAAAGCTGAAGGGAGAATTTCT
GCCAAATTTGATTGTGGCTACTTTGTGTCCCTCAAAATGGGAAGTGAAGTTCTCAATGGT
GTACTTTACCACCCAAACCAACAAGCTCAACCATCCTCTTCCAAATCGGGTGCACAAAGT
TGCAACGCGATTGTGCCTTACTACTCACCACCTATTTCAGGACGGAGGAACAGGAGGAGG
AGGAACGGAGACCCTAATCGTCCAAAACCTAATAGGAGTGGTTACAACTTCTTCTTTGCT
GAAAAACATGCAATGCTCAAATCTCTTCATCCACATAGAGAGAGGGAGTTCACTAAGATG
ATTGGAGAGTCTTGGAACAATCTATCTCCTGAAGAAAAAATGGTCTATCAAGAGTATGGG
GTGAAGGACAAGGAAAGGTACCAGAGGGAATTGAAGGAGTACAAAGAAAGCATGATGAAC
ACATCATCTTGCTACTAA

Peptide Sequence

PEP ID

Solyc12g094440.2.1
PEP Infomation

High mobility group family (AHRD V3.3 *** E5GCD0_CUCME)
Sequence

MSQTGLISPDAVKREMNPQPMASHQKIVNNPTLFWECLRNFHSAVGAKDTVPVIGGKDLD
LHVLYVEVTKRGGFNKVVADKKWREVSSIFKFSPTTTSASYALRKHYFTLLHHFEQVYFF
KHEVPMFDEGSCFKAEGRISAKFDCGYFVSLKMGSEVLNGVLYHPNQQAQPSSSKSGAQS
CNAIVPYYSPPISGRRNRRRRNGDPNRPKPNRSGYNFFFAEKHAMLKSLHPHREREFTKM
IGESWNNLSPEEKMVYQEYGVKDKERYQRELKEYKESMMNTSSCY*

Transcript Sequence

Transcript ID

Solyc12g094440.2.1
Transcript Infomation

High mobility group family (AHRD V3.3 *** E5GCD0_CUCME)
Sequence

AGTTTTCCTTTACCCACTGATATTCAACAACTTTTGAAAGTTGTTTTAGTTTTGCTATGA
AGAAGAAGCCAAAAGTTATAAACTCTCTGTACATAACCGCTGCTTCAACACTTGTCTCAA
AAACTTTGATTTTTTCAATTTTTTTCTTCATAAATAACCCCAAATTATCTCATTTTTATT
CATTACATTTCATCCATTTTGGTTTTTCACCAACTCCATTGCTCTGTTTTTTCTAGTTTC
TTGATTTTTCGGTTATTTTTTTATCCATCGCCGGGCGATATCGTGATGTCTCAGACAGGT
TTAATTTCTCCCGATGCGGTAAAAAGAGAGATGAATCCTCAACCAATGGCGTCTCACCAG
AAGATTGTGAATAATCCGACTCTGTTTTGGGAATGTCTCAGGAATTTTCACTCTGCTGTG
GGCGCAAAGGACACGGTTCCTGTGATTGGAGGGAAGGATCTTGATTTGCATGTTCTCTAT
GTTGAGGTGACTAAAAGGGGTGGCTTTAACAAGGTAGTGGCAGATAAGAAATGGAGAGAA
GTGAGTTCAATTTTCAAGTTTTCTCCAACAACAACAAGTGCTTCATATGCATTGAGGAAA
CATTATTTCACTTTGCTTCATCACTTTGAACAAGTTTATTTTTTCAAACATGAAGTTCCT
ATGTTTGATGAAGGTTCATGCTTCAAAGCTGAAGGGAGAATTTCTGCCAAATTTGATTGT
GGCTACTTTGTGTCCCTCAAAATGGGAAGTGAAGTTCTCAATGGTGTACTTTACCACCCA
AACCAACAAGCTCAACCATCCTCTTCCAAATCGGGTGCACAAAGTTGCAACGCGATTGTG
CCTTACTACTCACCACCTATTTCAGGACGGAGGAACAGGAGGAGGAGGAACGGAGACCCT
AATCGTCCAAAACCTAATAGGAGTGGTTACAACTTCTTCTTTGCTGAAAAACATGCAATG
CTCAAATCTCTTCATCCACATAGAGAGAGGGAGTTCACTAAGATGATTGGAGAGTCTTGG
AACAATCTATCTCCTGAAGAAAAAATGGTCTATCAAGAGTATGGGGTGAAGGACAAGGAA
AGGTACCAGAGGGAATTGAAGGAGTACAAAGAAAGCATGATGAACACATCATCTTGCTAC
TAAAAGGTAACTGATGAATGGTAGAAGAAGAAGAAGAGCATGAGATAAACATGTAAATGT
TTGTGTGGATCAAAACCTTATTAT