Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g094420.2.1
CDS Infomation

Mechanosensitive ion channel family protein (AHRD V3.3 *** AT2G17010.1)
Sequence

ATGGAAAAACTTAAAAAATCTTTCAAATCTGAAGAAGAAGAACATCAAAATCTCTTAAAC
CAAGCTGAAAAATCCAATCTTTCTGTGTTTAGAGAAACCCCAGAACCCCTAAAAGAAACT
GAAATGTCCATTTCTGCAGAACCCCATTTCACCAAGAATGATAGTAATGATAAAGATTTA
AACTTTATCACAGAATCACAACAAGAAGTTTTGGTTTGCAGTTCCACCTCTTCTTTTAGA
AAAAAATCAAATCTTTTGGTAAACAGGACAAAATCAAGGCTAATGGAACCATCTGAGCAA
GATCAGAGGTCTGGGGTTTTGTTAAAAGATAGTGAAATTGAAGAAGATGACCCCTTTTCA
GATGAGGATTTACCTGAGGAATTCAAGAAAGTGAAGTTTAGTTTATTAACTGTTCTTCAG
CTGGTCAGTTTGGTTTTAATTATTGCTGTTTTAAGTTGTAGTTTTGTGTTTCGTGTATTG
AGAGAAAAGAGGGCTCTTGGGCTTAAATTGTGGAAATGGGAAGTAATGGTTTTGGTGTTG
ATTTGTGGAAGATTGTTTTCTGGTTGGGTTATAAGGTTGGTTGTGTACTTCATTGAGAGT
AATTTTTTGTTGCGAAAACGCGTTTTATATTTCGTGTATGGATTGAGGAATTCAGTGCAG
AATTGTATTTGGTTGAGTTTAGTTTTGATTGCTTGGCTGTGTATTTTTGATGAAAAAGTT
GATAAAATGACTGGTGGGAAGGTTTTGCCTCATGTGTCAAGTATTTGGATTTGTCTTTTG
GTTGGTGCATACATTTGGTTGTTGAAAACGCTTCTTGTGAAGGTACTAGCTATGTCATTT
CATGTTAGTACATTCTTTGATCGAATTCAAGAATCTTTGTTTAATCAGTATGTGATCGAG
ACGTTGTCTGGGCCTGCATTGGTTGAGATTGATCAATCGGAGCAAGAGGAGGAAGGAGAG
AAAGTTATGGTTGAAGTGGAGAAGCTTCAGAGTGCTGGGGCTACATTGCCTGCTGATCTA
AAGACAAGCATATTTGCAAAGAGACCGATTGGAACACCGCGCAAGACTCCTACGGGTTCT
ACTCCGAGGAGTTCTGCATTTTCGAGGGTTATTTCCGAGAAGGAAAAGGAGGGTGGGATT
ACTATAGATCATCTGCATAAACTGAATCAGAAGAACATTTCTGCTTGGAATATGAAAAGG
CTGATGAATATGGTTAGAAATGGTGTACTGTCAACTTTGGATGAGAAGTTACCACAATCG
ACTTTCGAGGATGATACTGCTGTGCAGATCACTAGTGAAAAAAAGGCGAAAGCTGCAGCC
AAGCAGATTTTTAACAATGTAGCTAAGCCAGGATCCAAATTCATCTATTTGGAGGACTTG
ATGCGTTTTATGAAAGAAGACGAGGCTTCGAAAACAATGTGCCTTATTGAAAGTGGAACT
GAAACCAAAGGCATAAGTAAGCGTGCTCTGAAAAATTGGGCGGTTAACGCATTTAGAGAG
CGAAGGGCGCTTGCTCTGTCGTTAAATGACACTAAGACTGCTGTAAACAAGCTTCATCAA
ATGTTAAATGTCCTTGTGGCGATAATCATATTGGTCATCTGGCTCCTTATACTCAGAGTC
GCTACTATGCATTTCTTAGTCTTTTTGAGTTCCCAGATTCTTCTAGTAGTATTCATCTTC
GGAAACTCAGCCAAGACGACATTTGAGGCAATCATCTTTTTATTTGTAATGCACCCGTTT
GATGTAGGCGATCGTGTTGAAGTCGATGGAGTTCAGATGGTAGTTGAAGAGATGAATATA
CTGACTACAGTTTTCCTAAGATATGATAACCAAAAGATCATATATCCAAATAGTGTCCTA
TCGACGAAACCTATCAGTAATTACTACCGCAGTCCAGACATGGGAGATTCAGTCGATTTC
TCCATTCATATCTCAACTCCTATGGAAAAGATTGCTATGATGAAAGAAAAAATAACAAGG
TATATCGAAAACAGGAGTGATCATTGGTATCCGGCTCCAATGATTGTAATGAGAGACGTG
GAAAACATGAACGGGATAAAATGGTCCGTGTGGCTCTCACACACGATGAATCACCAAGAC
ATGGGAGAGAGATGGGCGAGAAGAGCTCTTCTTATCGAAGAAATGGTGAAAACATTCAGG
GAACTCGATATCCAGTATCGTATGCTACCTCTCGATATCAACATTCATAACCTCCCACCA
TTATCGTTAACAAGAGCTCCTTCTAACTGGACGACGTGTGCTTAA

Peptide Sequence

PEP ID

Solyc12g094420.2.1
PEP Infomation

Mechanosensitive ion channel family protein (AHRD V3.3 *** AT2G17010.1)
Sequence

MEKLKKSFKSEEEEHQNLLNQAEKSNLSVFRETPEPLKETEMSISAEPHFTKNDSNDKDL
NFITESQQEVLVCSSTSSFRKKSNLLVNRTKSRLMEPSEQDQRSGVLLKDSEIEEDDPFS
DEDLPEEFKKVKFSLLTVLQLVSLVLIIAVLSCSFVFRVLREKRALGLKLWKWEVMVLVL
ICGRLFSGWVIRLVVYFIESNFLLRKRVLYFVYGLRNSVQNCIWLSLVLIAWLCIFDEKV
DKMTGGKVLPHVSSIWICLLVGAYIWLLKTLLVKVLAMSFHVSTFFDRIQESLFNQYVIE
TLSGPALVEIDQSEQEEEGEKVMVEVEKLQSAGATLPADLKTSIFAKRPIGTPRKTPTGS
TPRSSAFSRVISEKEKEGGITIDHLHKLNQKNISAWNMKRLMNMVRNGVLSTLDEKLPQS
TFEDDTAVQITSEKKAKAAAKQIFNNVAKPGSKFIYLEDLMRFMKEDEASKTMCLIESGT
ETKGISKRALKNWAVNAFRERRALALSLNDTKTAVNKLHQMLNVLVAIIILVIWLLILRV
ATMHFLVFLSSQILLVVFIFGNSAKTTFEAIIFLFVMHPFDVGDRVEVDGVQMVVEEMNI
LTTVFLRYDNQKIIYPNSVLSTKPISNYYRSPDMGDSVDFSIHISTPMEKIAMMKEKITR
YIENRSDHWYPAPMIVMRDVENMNGIKWSVWLSHTMNHQDMGERWARRALLIEEMVKTFR
ELDIQYRMLPLDINIHNLPPLSLTRAPSNWTTCA*

Transcript Sequence

Transcript ID

Solyc12g094420.2.1
Transcript Infomation

Mechanosensitive ion channel family protein (AHRD V3.3 *** AT2G17010.1)
Sequence

TTTTAATACGTAAGCAAGTAAAAGTGAACGAATAGAGGAACCGACTTTAAGAAAGAAAAT
ACATGAATCTTCCATCATCATCTCTTCTTTCTTTCATTTTTCTCCAGATTCTTCCTCCAT
CTTCAAAAAAAAACCCAGAAAAAGATGAGGAATAATAGTAGTAAAACATCTTTTTCAGAC
ACTAAAAATCCCACTTTATTCACTGTTACTTTGTTCTTTCTTGATAATAGTGATTCATTC
AAGAACAAGCCAAGAATCAGCAACTTTTTCACTTCTGAAAAATGGAAAAACTTAAAAAAT
CTTTCAAATCTGAAGAAGAAGAACATCAAAATCTCTTAAACCAAGCTGAAAAATCCAATC
TTTCTGTGTTTAGAGAAACCCCAGAACCCCTAAAAGAAACTGAAATGTCCATTTCTGCAG
AACCCCATTTCACCAAGAATGATAGTAATGATAAAGATTTAAACTTTATCACAGAATCAC
AACAAGAAGTTTTGGTTTGCAGTTCCACCTCTTCTTTTAGAAAAAAATCAAATCTTTTGG
TAAACAGGACAAAATCAAGGCTAATGGAACCATCTGAGCAAGATCAGAGGTCTGGGGTTT
TGTTAAAAGATAGTGAAATTGAAGAAGATGACCCCTTTTCAGATGAGGATTTACCTGAGG
AATTCAAGAAAGTGAAGTTTAGTTTATTAACTGTTCTTCAGCTGGTCAGTTTGGTTTTAA
TTATTGCTGTTTTAAGTTGTAGTTTTGTGTTTCGTGTATTGAGAGAAAAGAGGGCTCTTG
GGCTTAAATTGTGGAAATGGGAAGTAATGGTTTTGGTGTTGATTTGTGGAAGATTGTTTT
CTGGTTGGGTTATAAGGTTGGTTGTGTACTTCATTGAGAGTAATTTTTTGTTGCGAAAAC
GCGTTTTATATTTCGTGTATGGATTGAGGAATTCAGTGCAGAATTGTATTTGGTTGAGTT
TAGTTTTGATTGCTTGGCTGTGTATTTTTGATGAAAAAGTTGATAAAATGACTGGTGGGA
AGGTTTTGCCTCATGTGTCAAGTATTTGGATTTGTCTTTTGGTTGGTGCATACATTTGGT
TGTTGAAAACGCTTCTTGTGAAGGTACTAGCTATGTCATTTCATGTTAGTACATTCTTTG
ATCGAATTCAAGAATCTTTGTTTAATCAGTATGTGATCGAGACGTTGTCTGGGCCTGCAT
TGGTTGAGATTGATCAATCGGAGCAAGAGGAGGAAGGAGAGAAAGTTATGGTTGAAGTGG
AGAAGCTTCAGAGTGCTGGGGCTACATTGCCTGCTGATCTAAAGACAAGCATATTTGCAA
AGAGACCGATTGGAACACCGCGCAAGACTCCTACGGGTTCTACTCCGAGGAGTTCTGCAT
TTTCGAGGGTTATTTCCGAGAAGGAAAAGGAGGGTGGGATTACTATAGATCATCTGCATA
AACTGAATCAGAAGAACATTTCTGCTTGGAATATGAAAAGGCTGATGAATATGGTTAGAA
ATGGTGTACTGTCAACTTTGGATGAGAAGTTACCACAATCGACTTTCGAGGATGATACTG
CTGTGCAGATCACTAGTGAAAAAAAGGCGAAAGCTGCAGCCAAGCAGATTTTTAACAATG
TAGCTAAGCCAGGATCCAAATTCATCTATTTGGAGGACTTGATGCGTTTTATGAAAGAAG
ACGAGGCTTCGAAAACAATGTGCCTTATTGAAAGTGGAACTGAAACCAAAGGCATAAGTA
AGCGTGCTCTGAAAAATTGGGCGGTTAACGCATTTAGAGAGCGAAGGGCGCTTGCTCTGT
CGTTAAATGACACTAAGACTGCTGTAAACAAGCTTCATCAAATGTTAAATGTCCTTGTGG
CGATAATCATATTGGTCATCTGGCTCCTTATACTCAGAGTCGCTACTATGCATTTCTTAG
TCTTTTTGAGTTCCCAGATTCTTCTAGTAGTATTCATCTTCGGAAACTCAGCCAAGACGA
CATTTGAGGCAATCATCTTTTTATTTGTAATGCACCCGTTTGATGTAGGCGATCGTGTTG
AAGTCGATGGAGTTCAGATGGTAGTTGAAGAGATGAATATACTGACTACAGTTTTCCTAA
GATATGATAACCAAAAGATCATATATCCAAATAGTGTCCTATCGACGAAACCTATCAGTA
ATTACTACCGCAGTCCAGACATGGGAGATTCAGTCGATTTCTCCATTCATATCTCAACTC
CTATGGAAAAGATTGCTATGATGAAAGAAAAAATAACAAGGTATATCGAAAACAGGAGTG
ATCATTGGTATCCGGCTCCAATGATTGTAATGAGAGACGTGGAAAACATGAACGGGATAA
AATGGTCCGTGTGGCTCTCACACACGATGAATCACCAAGACATGGGAGAGAGATGGGCGA
GAAGAGCTCTTCTTATCGAAGAAATGGTGAAAACATTCAGGGAACTCGATATCCAGTATC
GTATGCTACCTCTCGATATCAACATTCATAACCTCCCACCATTATCGTTAACAAGAGCTC
CTTCTAACTGGACGACGTGTGCTTAAAATTGATTGAAAAGACGATCACTAAAGATCATAC
AAGATGGTTGAGGTGGTTTTTTGTTCATTGTTATTAGATGTCACAAGGTCCATACATAGA
TTGTGATTACTAATTACTAATTAGATGTTACAAAACTATTGTAATAAGATGTTTTAGGCC
AAATGTTCATTGTAACAATGTTTAACCTTCTTAATGGATCTTCAACTTAACTAATTACAC
ACAAATTTTGTCATATGAAAAAAATTGTGTAAGCCCAATATAAAGAAAGGACTCAATACT
ATAGTGAAACTCTTAACAAATGTCACATAAGTTCTTTTCTAATGATATTTCAAGCTTATT
GTCTCGATCCTCGATTCAAATCAACACGTTAAGTTTACTTATTGTCTCGATCCTCGATTC
AAATTCACACATTAAGTTCATTTAAAAGTAAATTC