Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g089280.2.1
CDS Infomation	5'-3' exoribonuclease 3 (AHRD V3.3 *** AT1G75660.1)
Sequence	ATGGGAGTTCCAGCATTTTACCGATGGTTAGCTGAGAAGTATTCAATGGTTATAGTTGAT GTGATTGAAGAAGAAGCACCTGTTATTGAAGGAATTAAATTTCCACTTGATACGAGTAAA CCCAATCCAAACAATATCGAATATGATAACTTGTATTTGGATATGAATGGTATTGTTCAT CCATGTTTTCATCCCGAAGATCGACCTTCTCCAACCACATTCGATGAGGTGTTCAATTGC ATGTTTGACTACATAGACAGGCTTTTCTCAATGGTGCGTCCTCGAAAGCTGCTATATATG GCTATTGATGGTGTTGCACCAAGGGCAAAAATGAACCAGCAAAGATCTAGACGTTTTAGA GCAGCAAAAGATGCAGCAGATGCGGCAGCCGAGGAGGAAAAGTTGCGTGAGGAATTTGAG AGGGAGGGTAAGAAGCTTCCTCCTAAACAGGCTTCCCAAATTTTTGATTCAAATGTAATC ACTCCGGGAACCCAATTCATGGCTACTTTGTCGATTGCTCTTCAATACTATATTCATCTT AGACTAAACCATGATCCTGGATGGAAAAAGATTAAGGTTATACTTTCTGATGCAAATGTC CCTGGTGAAGGTGAGCATAAAATTATGTCCTATATCCGCCTACAACGGAATCTTTCTGGA TATGATCCAAATATGCGTCATTGTCTTTATGGTTTGGATGCAGATCTAATTATGCTGGGT TTGGCTACTCATGAAGTTCACTTCTCCATACTCAGAGAGGTCGTATTTACTGCAGGCCAG CGGGACAAATGTTTCCTTTGTGGTCAAATGGGTCATTTAGCTGCAAATTGCGATGGAAAG GCAAAGCGGAAAGCAGGGGTGTTTGATGAGAAAGGAGATGCCGAGGTAGTGGCAAAGAAA CCCTTCCAGTTCCTCAACATCTGGACTCTACGGGAGTATCTGGAATATGATTTGAGAATT CCCAATCCTCCCTTTGTGATTGATTTGGAGCGTATCGTTGATGACTTCATATTTATGTGC TTCTTCGTTGGCAATGATTTTCTACCACATATGCCCACACTTGAGATTCGCGAGGGTGCG ATAAACTTGTTGATGGCTGTTTATAAGAAGGAGTTTAGGTCTTTGGGAGGGTATCTGACT GATGCAAGCAAGCCAAACCTTGGCAGGGTAGAATCTTTTATTCAGGCGGTAGGATTATAT GAAGATAAGATATTCCGAAAGAGATCTAAGATGCATAAGAAACAATGTGAAAGAAATGAG CGTAACAAAGCTATGGCAATAAGACAGGCAAAAAGAGAGGCAAAAAGAAAAAACGATTTT GCGCCTCAAGTTGCACCTGAATCTCTGGTTCCAGTTACTCGATTCCATGGTTCTCGTCTT GCTTCAGGTCCTTCACCTTCTCCCTATCAGCAGGGAGGAGCTTCTAAATCTTGTAGACCT GATCAGCTTGGGCAGACCACCTCTAGTCTTTCCATCCTTGACATTAAGACCGAACAGTCT GACGCTTCTGATGATAAACAGACTGCCCGTACCCGAAAAAACAAAAGGAAAAGGGCTGCC GACCGTGCCAGAAAGATAGCACGTTTGAGTTCCGAGGCCACAATAGGAGCTGCAATTGTC GAAGCTGAAGTTTCTGAAAACAAGGAAGAATTGAAAACAAAACTAAACAAGTTGCTTCGA GACAAGAATGATACTTTCAATTCAGAGAATCCAGAAGAAGACAAGGTCAAACTGGGAGTG CCCGGATGGAAAGAGAGGTATTATGATGAAAAATTTTCTGCAAAAACACCTGAAGAAATG GAAGCAGTACGAAAAGAAGTTGTGCTAAAATATACAGAAGGGCTATGCTGGGTTATGCAT TATTATTATGAAGGGGTTTGTTCCTGGCAGTGGTTTTATCCCTATCATTATGCACCATTT GCTTCTGATCTCAAGGATCTCGGGCAGATGAATATCACATTTGAACTAGGTTCTCCTTTC AAGCCATTCAATCAGTTGTTGGGGGTATTCCCTGCTGCCAGTGCTCATGCTCTGCCTGAG CAGTACAGGAAATTGATGACAGACCCAAAGTCACTCATTCTTGATTTTTATCCTACCGAT TTTGAGGTGGATATGAATGGCAAGCGCTATTCTTGGCAGGGTATTGCAAAATTGCCTTTC ATTGAAGAAGCAAGGCTCCTAACAGAAGTTGCAAAAATTGAACATTCTTTGACGGAAGAA GAATCACGAAGAAACAGTGTGATGTTTGATATGCTTTTTGTGTCGTTATCCAATCCTTTG TCTCCATGCATTTTTGCTCTTGATGCACGCTGTAAGCATCTTACAGTCGGAGAACGTCTT GAAGTCAAGGAGCGGTTGGACCCAATAGCTAGTGGTGGGATGAATGGCTACCTATCCCTT TGCAGAGGGGATCCTTGTCCTTCGATTTTTAAATCACCCATTGAAGGGATGGAAAATATT ACACAAAATCAAGTCATATGTGCAATATACAGACTTCCAGATACTCATAAACATATCCCT CGGCCAATGGAAGGGGTTATTTTACCCAAAAAGATGGTCACATTAGGTGATATGAAACCT GATCCTGTACTATGGCATGAGCAATCTAACAAGAAACCTTGGGAAGATGGACGGAACCGC CACCGTGGTGCAATGTCTGATAGGGACCACCACCGTGATGCAATGTCTGATAGGAACATC CAATGTGGTGCAATGTCTGGTTTTCAGCTTGGAGAAGCTGCACGCAGATTGGTGGTGAAT AGTTTGCAGAAGAAAGAAGATAGGGGTGGAAATGGTGATCACAGGCGTCCACATAATGGC CAAGGACGTGATAATTATATGCACGCCCGACCAGCGTCCTGTCGTGCTGCATATGGTCCT CCCGTTCCTTCCTTTGAAACCCCGAGTAACAATGCTCATGAAAACATACAGCCTAGTTTC GTCCATTCTGCTCAAGATCCTGGACGTTACCCCAGATCATCAGGTTCAAATGACCATAGT AGTAAGTCTCGCCCATATCATGAGACCCACAGTAGAGATTATCGTGGTCATGGACATCAT ACATATAAAATGCAGCAAAATGGTGCACACAGTCATTCCTCGTACGCCAGTCATCCTCAG CACGTGGGCCAAATACCAGTTCCACCAACTACCATTTTCCACCAGCAGAGTGGAAATGAC GTTTCCATGAGCTATGAACCTCGCGGGGCTGAAAGCTATAACCAACAGGGTGGTGGAAGG GCCTCCCGGAACCAAAATGGTACAGGATATCAACCATATTCTTCAGGAAATCAGTTCTCA GCTTTTAGGAGGGGAGGAAATAGAAGGCCACCTTCAGGGCATCGTCGGTAG

Peptide Sequence

PEP ID	Solyc12g089280.2.1
PEP Infomation	5'-3' exoribonuclease 3 (AHRD V3.3 *** AT1G75660.1)
Sequence	MGVPAFYRWLAEKYSMVIVDVIEEEAPVIEGIKFPLDTSKPNPNNIEYDNLYLDMNGIVH PCFHPEDRPSPTTFDEVFNCMFDYIDRLFSMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR AAKDAADAAAEEEKLREEFEREGKKLPPKQASQIFDSNVITPGTQFMATLSIALQYYIHL RLNHDPGWKKIKVILSDANVPGEGEHKIMSYIRLQRNLSGYDPNMRHCLYGLDADLIMLG LATHEVHFSILREVVFTAGQRDKCFLCGQMGHLAANCDGKAKRKAGVFDEKGDAEVVAKK PFQFLNIWTLREYLEYDLRIPNPPFVIDLERIVDDFIFMCFFVGNDFLPHMPTLEIREGA INLLMAVYKKEFRSLGGYLTDASKPNLGRVESFIQAVGLYEDKIFRKRSKMHKKQCERNE RNKAMAIRQAKREAKRKNDFAPQVAPESLVPVTRFHGSRLASGPSPSPYQQGGASKSCRP DQLGQTTSSLSILDIKTEQSDASDDKQTARTRKNKRKRAADRARKIARLSSEATIGAAIV EAEVSENKEELKTKLNKLLRDKNDTFNSENPEEDKVKLGVPGWKERYYDEKFSAKTPEEM EAVRKEVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLGQMNITFELGSPF KPFNQLLGVFPAASAHALPEQYRKLMTDPKSLILDFYPTDFEVDMNGKRYSWQGIAKLPF IEEARLLTEVAKIEHSLTEEESRRNSVMFDMLFVSLSNPLSPCIFALDARCKHLTVGERL EVKERLDPIASGGMNGYLSLCRGDPCPSIFKSPIEGMENITQNQVICAIYRLPDTHKHIP RPMEGVILPKKMVTLGDMKPDPVLWHEQSNKKPWEDGRNRHRGAMSDRDHHRDAMSDRNI QCGAMSGFQLGEAARRLVVNSLQKKEDRGGNGDHRRPHNGQGRDNYMHARPASCRAAYGP PVPSFETPSNNAHENIQPSFVHSAQDPGRYPRSSGSNDHSSKSRPYHETHSRDYRGHGHH TYKMQQNGAHSHSSYASHPQHVGQIPVPPTTIFHQQSGNDVSMSYEPRGAESYNQQGGGR ASRNQNGTGYQPYSSGNQFSAFRRGGNRRPPSGHRR*

Transcript Sequence

Transcript ID	Solyc12g089280.2.1
Transcript Infomation	5'-3' exoribonuclease 3 (AHRD V3.3 *** AT1G75660.1)
Sequence	ATTGTTAGTTCTTATAGCATATACTCTCTTAAACCGTTTCTCTTACAGTAGCCATTGTTA GGGTTTTGTTTTTGTTCAATTGACAATAGCTCAAAAGCTCAATTACAATGGGAGTTCCAG CATTTTACCGATGGTTAGCTGAGAAGTATTCAATGGTTATAGTTGATGTGATTGAAGAAG AAGCACCTGTTATTGAAGGAATTAAATTTCCACTTGATACGAGTAAACCCAATCCAAACA ATATCGAATATGATAACTTGTATTTGGATATGAATGGTATTGTTCATCCATGTTTTCATC CCGAAGATCGACCTTCTCCAACCACATTCGATGAGGTGTTCAATTGCATGTTTGACTACA TAGACAGGCTTTTCTCAATGGTGCGTCCTCGAAAGCTGCTATATATGGCTATTGATGGTG TTGCACCAAGGGCAAAAATGAACCAGCAAAGATCTAGACGTTTTAGAGCAGCAAAAGATG CAGCAGATGCGGCAGCCGAGGAGGAAAAGTTGCGTGAGGAATTTGAGAGGGAGGGTAAGA AGCTTCCTCCTAAACAGGCTTCCCAAATTTTTGATTCAAATGTAATCACTCCGGGAACCC AATTCATGGCTACTTTGTCGATTGCTCTTCAATACTATATTCATCTTAGACTAAACCATG ATCCTGGATGGAAAAAGATTAAGGTTATACTTTCTGATGCAAATGTCCCTGGTGAAGGTG AGCATAAAATTATGTCCTATATCCGCCTACAACGGAATCTTTCTGGATATGATCCAAATA TGCGTCATTGTCTTTATGGTTTGGATGCAGATCTAATTATGCTGGGTTTGGCTACTCATG AAGTTCACTTCTCCATACTCAGAGAGGTCGTATTTACTGCAGGCCAGCGGGACAAATGTT TCCTTTGTGGTCAAATGGGTCATTTAGCTGCAAATTGCGATGGAAAGGCAAAGCGGAAAG CAGGGGTGTTTGATGAGAAAGGAGATGCCGAGGTAGTGGCAAAGAAACCCTTCCAGTTCC TCAACATCTGGACTCTACGGGAGTATCTGGAATATGATTTGAGAATTCCCAATCCTCCCT TTGTGATTGATTTGGAGCGTATCGTTGATGACTTCATATTTATGTGCTTCTTCGTTGGCA ATGATTTTCTACCACATATGCCCACACTTGAGATTCGCGAGGGTGCGATAAACTTGTTGA TGGCTGTTTATAAGAAGGAGTTTAGGTCTTTGGGAGGGTATCTGACTGATGCAAGCAAGC CAAACCTTGGCAGGGTAGAATCTTTTATTCAGGCGGTAGGATTATATGAAGATAAGATAT TCCGAAAGAGATCTAAGATGCATAAGAAACAATGTGAAAGAAATGAGCGTAACAAAGCTA TGGCAATAAGACAGGCAAAAAGAGAGGCAAAAAGAAAAAACGATTTTGCGCCTCAAGTTG CACCTGAATCTCTGGTTCCAGTTACTCGATTCCATGGTTCTCGTCTTGCTTCAGGTCCTT CACCTTCTCCCTATCAGCAGGGAGGAGCTTCTAAATCTTGTAGACCTGATCAGCTTGGGC AGACCACCTCTAGTCTTTCCATCCTTGACATTAAGACCGAACAGTCTGACGCTTCTGATG ATAAACAGACTGCCCGTACCCGAAAAAACAAAAGGAAAAGGGCTGCCGACCGTGCCAGAA AGATAGCACGTTTGAGTTCCGAGGCCACAATAGGAGCTGCAATTGTCGAAGCTGAAGTTT CTGAAAACAAGGAAGAATTGAAAACAAAACTAAACAAGTTGCTTCGAGACAAGAATGATA CTTTCAATTCAGAGAATCCAGAAGAAGACAAGGTCAAACTGGGAGTGCCCGGATGGAAAG AGAGGTATTATGATGAAAAATTTTCTGCAAAAACACCTGAAGAAATGGAAGCAGTACGAA AAGAAGTTGTGCTAAAATATACAGAAGGGCTATGCTGGGTTATGCATTATTATTATGAAG GGGTTTGTTCCTGGCAGTGGTTTTATCCCTATCATTATGCACCATTTGCTTCTGATCTCA AGGATCTCGGGCAGATGAATATCACATTTGAACTAGGTTCTCCTTTCAAGCCATTCAATC AGTTGTTGGGGGTATTCCCTGCTGCCAGTGCTCATGCTCTGCCTGAGCAGTACAGGAAAT TGATGACAGACCCAAAGTCACTCATTCTTGATTTTTATCCTACCGATTTTGAGGTGGATA TGAATGGCAAGCGCTATTCTTGGCAGGGTATTGCAAAATTGCCTTTCATTGAAGAAGCAA GGCTCCTAACAGAAGTTGCAAAAATTGAACATTCTTTGACGGAAGAAGAATCACGAAGAA ACAGTGTGATGTTTGATATGCTTTTTGTGTCGTTATCCAATCCTTTGTCTCCATGCATTT TTGCTCTTGATGCACGCTGTAAGCATCTTACAGTCGGAGAACGTCTTGAAGTCAAGGAGC GGTTGGACCCAATAGCTAGTGGTGGGATGAATGGCTACCTATCCCTTTGCAGAGGGGATC CTTGTCCTTCGATTTTTAAATCACCCATTGAAGGGATGGAAAATATTACACAAAATCAAG TCATATGTGCAATATACAGACTTCCAGATACTCATAAACATATCCCTCGGCCAATGGAAG GGGTTATTTTACCCAAAAAGATGGTCACATTAGGTGATATGAAACCTGATCCTGTACTAT GGCATGAGCAATCTAACAAGAAACCTTGGGAAGATGGACGGAACCGCCACCGTGGTGCAA TGTCTGATAGGGACCACCACCGTGATGCAATGTCTGATAGGAACATCCAATGTGGTGCAA TGTCTGGTTTTCAGCTTGGAGAAGCTGCACGCAGATTGGTGGTGAATAGTTTGCAGAAGA AAGAAGATAGGGGTGGAAATGGTGATCACAGGCGTCCACATAATGGCCAAGGACGTGATA ATTATATGCACGCCCGACCAGCGTCCTGTCGTGCTGCATATGGTCCTCCCGTTCCTTCCT TTGAAACCCCGAGTAACAATGCTCATGAAAACATACAGCCTAGTTTCGTCCATTCTGCTC AAGATCCTGGACGTTACCCCAGATCATCAGGTTCAAATGACCATAGTAGTAAGTCTCGCC CATATCATGAGACCCACAGTAGAGATTATCGTGGTCATGGACATCATACATATAAAATGC AGCAAAATGGTGCACACAGTCATTCCTCGTACGCCAGTCATCCTCAGCACGTGGGCCAAA TACCAGTTCCACCAACTACCATTTTCCACCAGCAGAGTGGAAATGACGTTTCCATGAGCT ATGAACCTCGCGGGGCTGAAAGCTATAACCAACAGGGTGGTGGAAGGGCCTCCCGGAACC AAAATGGTACAGGATATCAACCATATTCTTCAGGAAATCAGTTCTCAGCTTTTAGGAGGG GAGGAAATAGAAGGCCACCTTCAGGGCATCGTCGGTAGAGAGTCCTTTTAGCCCAGACTA TTTAAGGCCTAGCTTAGTTGCTGGTACGCGAAATCCTGCGAACAACTTCCTTACTTTTGG TAAGCAAGGAAGAAGAACAATAGCTGAGTTTCTGTCGATGATATTTATCTGCAGGCTGCT TTCTGGTGCTTATCATAATGGTTATTGTAGTGCTTTAGCTATGTATTTTTTCCATGTTCT TTATTCTTAACACACAATGTCTGAGTTTCATTTATTATAGAGCACAATAACTTATTTGAA AGGTTAAGCTTGGATGTATGAAGATGAATTTTTGCCTCTAGAAGACTGGTTTATCTGTAT TCTGAGTACTTATTTGCTAAACATTTTGGTGTGTTGTATTAATTGAAGAAAGGAGATCAT AGCTTATCCTTGAGTCGAGGGTTTTTCGGAAACAGTCTAAGAGTCAAGAACATATAAATT CAAACCCTACTTTCTTACTATTTTCGTGAAAAGGTGGGTGGATGTATGAGTAAGATTTCT TATAATTACTAATGTTGCCTCGTAAACTTAGGAGAAGCCT