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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g089260.2.1
CDS Infomation

Zinc finger transcription factor 80
Sequence

ATGCGAGGACGGGAGAAATCGAAAAGGGTTACTTGGGCTTCAGATGATAGTCTTTGTCAG
GTAAAACTTTTCCTGTCTGATGATTCCCCTTCCCAAGTTGGATTAGGAGGAGCTCAAGAT
CATCTCCAAGCAAAGATATCATTGCCTTTGCACGCAGGTCTTTTGGTGTCTGATGATAAT
TTACCACCAGGCTTTGAGGGTGCACAGCCTGCAAGCCTCTGGAAGAATAAAGTAGCTCAA
ATCCCTGTAATCAAATGGAGGCGTCCTCCCTCTTTTGTGTTGGATACAAGTTGGCGAGTC
GTTGCTGGTGAAGAAAGCAATGACATGGAGGTTCAGAAACAACGGGAGATGAGAGTTCTC
GAAGCAATTTATCCACGTGAATCTTCCATTCCTCCAAATCCTTCTATGGGTCCTGGAGAT
GAAACCCTTCATAATGATCAGCACACACCAGTTGTACCCTTAACACCTGTTGAAGAGGAG
GAGGTAGCAGATCCTTCATTTGGCACTGCTGTACCTACTAATGGTGCCAGCTCAACGGCC
CAGGTAATGCAGTCAGGAGTTCCCTTGGGCAATAGAAGTGCCGGAAATAGCCTTCCAGTC
CATGGAATCTCATCACCGGGAGGTGTTCCTGGCTTGGGGCTTGATGCTGTAGCAGAAGCT
CAGGCAGCTTTAACTGCATTCATGGCAGACAGTGGCCAGGGAAATCTGATTGATCGCGAT
CTGCTTATAAAAATTTTGAGTGACCCGAAAATTGTTGGGCAACTGGTTACACACCAAGGA
GTAGGCACCAGCTCCCATAGCGTGCCAGCTATGAATACCCAAAGCATATCTGCTGCTAAT
CTCATGCCCAACGCAAGGCCACAGGCATCAAGTATTGCTGCTCCATCTCAACCTGTAGTT
AGTCGAGCCAATCCATCTTTCTATCACTCAGGTAGGACAGATCCTCCTCCAGTTCAAGTC
AGTAGAACAGAACTAGTTATCCCCTCGATGGCAGGTGCTACAAACGGCCCCTTCCACTCT
GCTCCAAGTAGAATAGGACCCGTTTCCGGTTTGAGGCCTCGTATACCCGAGGCCATGTCA
GCTCCTTTACCAGCTCCAGTAGCAACTATGTCAACACCTACTTCCTCTATGCCAGCACCT
GTAGCTAGGGACATCAACTATTACAAGTCTCTCATTCAGCAGCATGGAGGAGAAAGGCAA
GAAACATTACCACCACAATATAACAACCACCGAAACAACCAACAGTTAGGTTCAGTTCAA
GAATCACAAAATAGCTACAATTCAAGAGATTCAAAACCTAAGATAATGAAGCCTTGCATC
TATTATAATAGTTCACGAGGATGCCGGCATGGCGCCAACTGTGCGTATTTGCATGATGCA
TCTCCCCAACAGAGGGGGGTGGGTAGCTTGCCAGAGGTCCAAAGTTCAAAGAGAATGAAA
ATGGATAGGGAGATTACTGGTACATAA

Peptide Sequence

PEP ID

Solyc12g089260.2.1
PEP Infomation

Zinc finger transcription factor 80
Sequence

MRGREKSKRVTWASDDSLCQVKLFLSDDSPSQVGLGGAQDHLQAKISLPLHAGLLVSDDN
LPPGFEGAQPASLWKNKVAQIPVIKWRRPPSFVLDTSWRVVAGEESNDMEVQKQREMRVL
EAIYPRESSIPPNPSMGPGDETLHNDQHTPVVPLTPVEEEEVADPSFGTAVPTNGASSTA
QVMQSGVPLGNRSAGNSLPVHGISSPGGVPGLGLDAVAEAQAALTAFMADSGQGNLIDRD
LLIKILSDPKIVGQLVTHQGVGTSSHSVPAMNTQSISAANLMPNARPQASSIAAPSQPVV
SRANPSFYHSGRTDPPPVQVSRTELVIPSMAGATNGPFHSAPSRIGPVSGLRPRIPEAMS
APLPAPVATMSTPTSSMPAPVARDINYYKSLIQQHGGERQETLPPQYNNHRNNQQLGSVQ
ESQNSYNSRDSKPKIMKPCIYYNSSRGCRHGANCAYLHDASPQQRGVGSLPEVQSSKRMK
MDREITGT*

Transcript Sequence

Transcript ID

Solyc12g089260.2.1
Transcript Infomation

Zinc finger transcription factor 80
Sequence

AAATTAAAAAAAAATTCAGAGGAATTAGGGTTCTTATTTAGGGTTGCCTTTTGATCTCTG
TTCCTCTTTTTTTTTTTTCTCTCTTTCTCTTCTCTCTGTTAAGTAAAATTTACTTTCATC
GGAAAAATCGTTTTCTTCAAAATCGGATCAAAATTTAGCTGATTTTTTAGGGTTTTTGGA
GCGAATTTTGACGATAAAATCACTGTTAATCCTATTGGCTTTAAGGTTTTTTTATATTTG
AGAACTGAATCGAATCGAATCGGAATTTTTTTTGTATTTGTAAATATGCGAGGACGGGAG
AAATCGAAAAGGGTTACTTGGGCTTCAGATGATAGTCTTTGTCAGGTAAAACTTTTCCTG
TCTGATGATTCCCCTTCCCAAGTTGGATTAGGAGGAGCTCAAGATCATCTCCAAGCAAAG
ATATCATTGCCTTTGCACGCAGGTCTTTTGGTGTCTGATGATAATTTACCACCAGGCTTT
GAGGGTGCACAGCCTGCAAGCCTCTGGAAGAATAAAGTAGCTCAAATCCCTGTAATCAAA
TGGAGGCGTCCTCCCTCTTTTGTGTTGGATACAAGTTGGCGAGTCGTTGCTGGTGAAGAA
AGCAATGACATGGAGGTTCAGAAACAACGGGAGATGAGAGTTCTCGAAGCAATTTATCCA
CGTGAATCTTCCATTCCTCCAAATCCTTCTATGGGTCCTGGAGATGAAACCCTTCATAAT
GATCAGCACACACCAGTTGTACCCTTAACACCTGTTGAAGAGGAGGAGGTAGCAGATCCT
TCATTTGGCACTGCTGTACCTACTAATGGTGCCAGCTCAACGGCCCAGGTAATGCAGTCA
GGAGTTCCCTTGGGCAATAGAAGTGCCGGAAATAGCCTTCCAGTCCATGGAATCTCATCA
CCGGGAGGTGTTCCTGGCTTGGGGCTTGATGCTGTAGCAGAAGCTCAGGCAGCTTTAACT
GCATTCATGGCAGACAGTGGCCAGGGAAATCTGATTGATCGCGATCTGCTTATAAAAATT
TTGAGTGACCCGAAAATTGTTGGGCAACTGGTTACACACCAAGGAGTAGGCACCAGCTCC
CATAGCGTGCCAGCTATGAATACCCAAAGCATATCTGCTGCTAATCTCATGCCCAACGCA
AGGCCACAGGCATCAAGTATTGCTGCTCCATCTCAACCTGTAGTTAGTCGAGCCAATCCA
TCTTTCTATCACTCAGGTAGGACAGATCCTCCTCCAGTTCAAGTCAGTAGAACAGAACTA
GTTATCCCCTCGATGGCAGGTGCTACAAACGGCCCCTTCCACTCTGCTCCAAGTAGAATA
GGACCCGTTTCCGGTTTGAGGCCTCGTATACCCGAGGCCATGTCAGCTCCTTTACCAGCT
CCAGTAGCAACTATGTCAACACCTACTTCCTCTATGCCAGCACCTGTAGCTAGGGACATC
AACTATTACAAGTCTCTCATTCAGCAGCATGGAGGAGAAAGGCAAGAAACATTACCACCA
CAATATAACAACCACCGAAACAACCAACAGTTAGGTTCAGTTCAAGAATCACAAAATAGC
TACAATTCAAGAGATTCAAAACCTAAGATAATGAAGCCTTGCATCTATTATAATAGTTCA
CGAGGATGCCGGCATGGCGCCAACTGTGCGTATTTGCATGATGCATCTCCCCAACAGAGG
GGGGTGGGTAGCTTGCCAGAGGTCCAAAGTTCAAAGAGAATGAAAATGGATAGGGAGATT
ACTGGTACATAATAATGCAGCTTGGCTCTTCTCTGTACATTAAAATTTTTTCTCAAGGGA
GGAATTGCTTGTTTGCAACTTGGCCATTTTTGCCCCCTTTTTTTCCTCCATTCCCCTACA
ATGAGTCAACTTCATTAAATATTTTACTTATGGTTCTAAATTTCAATTACAATACAACTT
TCTTCTCTGCTA