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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g089210.2.1
CDS Infomation

Ornithine carbamoyltransferase (AHRD V3.3 *** K4BVE0_SOLLC)
Sequence

ATGGCCGCCATTTTCTCTCAGTTATCTTCTCTCTGTTCACCGGAAAACCTCTCCTTCTCC
TCCGTTTACACACTCTCCCACTCCGGCAAGCAATCGTCCCAATTTTCTGGTGTAATCTCA
CCTTCTCCGGTCACATTTCCGGCGATACGTCAACGCATCTCATGCCAAACCACCTCTTCA
GCTGCAGCTCCTTCTTCCTCAGTTATTGCAAAAGGAACTGCCAATCAAAAGGACTTTCTA
CACATTAATGATTTCGATAAAGCCACTATTTTGAACATCTTGGATCGAGCCAGAGAGGTG
AAAGAGTTACTGAAATCAGGAGAGAGGACATATCTCCCATTCAAGGGTAAAACTATGGCG
ATGATTTTTGCTAAGCCTTCCATGAGGACACGTGTTTCTTTTGAGACAGGTTTTTACTTG
CTTGGAGGACATGCAATCTATTTGGGACCAAATGATATACAGATGGGTAAGCGGGAAGAA
ACTCGTGATGTTGCTCGTGTTCTTTCTCGCTATAATGATATCATTATGGCTAGAGTTTTT
GCTCATCAGGACATTCTTGATCTAGCTAAATATGCAATTGTTCCTGTGATCAATGGCCTG
ACAGACTATAACCATCCTTGTCAAATAATGGCTGATGCCCTTACAATGATTGAACATGTC
GGCCAGCTGGAAGGAACTAAGGTTGTCTATGTTGGAGATGGAAATAACATAGTGCATTCG
TGGTTGCTTCTGGCTGCGGTAATTCCATTCCACTTTGTTTGTGCCTGTCCCAAAGGTTTT
GAACCTGATCAGAAAACTGTTGAGAAAGCACAACAAGCTGGAGTCAGCAAAATCGAGATA
ACTAATGATCCAAAAGAAGCTGTTAGAGAAGCTGATGTTGTCTATGCAGATGTCTGGGCC
AGTATGGGACAAAAGGAAGAAGCCGCACATCGCCGCCAAGTATTTCAAGGATTCCAGGTG
GATGAACAACTTATGAAGCTAGCTGGAAAAAAAGCATACTTTATGCATTGTTTGCCTGCA
GAAAGAGGAGTGGAAGTTACTGACGGTGTGATCGAAGCACCAAACTCCATTGTGTTCCCT
CAAGCTGAGAATCGCATGCATGCACAAAATGCAATAATGCTTCATGTTCTTGGCTTGTAA

Peptide Sequence

PEP ID

Solyc12g089210.2.1
PEP Infomation

Ornithine carbamoyltransferase (AHRD V3.3 *** K4BVE0_SOLLC)
Sequence

MAAIFSQLSSLCSPENLSFSSVYTLSHSGKQSSQFSGVISPSPVTFPAIRQRISCQTTSS
AAAPSSSVIAKGTANQKDFLHINDFDKATILNILDRAREVKELLKSGERTYLPFKGKTMA
MIFAKPSMRTRVSFETGFYLLGGHAIYLGPNDIQMGKREETRDVARVLSRYNDIIMARVF
AHQDILDLAKYAIVPVINGLTDYNHPCQIMADALTMIEHVGQLEGTKVVYVGDGNNIVHS
WLLLAAVIPFHFVCACPKGFEPDQKTVEKAQQAGVSKIEITNDPKEAVREADVVYADVWA
SMGQKEEAAHRRQVFQGFQVDEQLMKLAGKKAYFMHCLPAERGVEVTDGVIEAPNSIVFP
QAENRMHAQNAIMLHVLGL*

Transcript Sequence

Transcript ID

Solyc12g089210.2.1
Transcript Infomation

Ornithine carbamoyltransferase (AHRD V3.3 *** K4BVE0_SOLLC)
Sequence

AAATAGTCAGAAGAAATAAAATAAAATTAATTAATATTTGAAGTTATTCTTGAGTAGGGT
TTATTCATATTAATTAACACAAACACTCTGACAAATTACTCTTCAACACTCGCCATCCAA
ACAACCAAAACAATGGCCGCCATTTTCTCTCAGTTATCTTCTCTCTGTTCACCGGAAAAC
CTCTCCTTCTCCTCCGTTTACACACTCTCCCACTCCGGCAAGCAATCGTCCCAATTTTCT
GGTGTAATCTCACCTTCTCCGGTCACATTTCCGGCGATACGTCAACGCATCTCATGCCAA
ACCACCTCTTCAGCTGCAGCTCCTTCTTCCTCAGTTATTGCAAAAGGAACTGCCAATCAA
AAGGACTTTCTACACATTAATGATTTCGATAAAGCCACTATTTTGAACATCTTGGATCGA
GCCAGAGAGGTGAAAGAGTTACTGAAATCAGGAGAGAGGACATATCTCCCATTCAAGGGT
AAAACTATGGCGATGATTTTTGCTAAGCCTTCCATGAGGACACGTGTTTCTTTTGAGACA
GGTTTTTACTTGCTTGGAGGACATGCAATCTATTTGGGACCAAATGATATACAGATGGGT
AAGCGGGAAGAAACTCGTGATGTTGCTCGTGTTCTTTCTCGCTATAATGATATCATTATG
GCTAGAGTTTTTGCTCATCAGGACATTCTTGATCTAGCTAAATATGCAATTGTTCCTGTG
ATCAATGGCCTGACAGACTATAACCATCCTTGTCAAATAATGGCTGATGCCCTTACAATG
ATTGAACATGTCGGCCAGCTGGAAGGAACTAAGGTTGTCTATGTTGGAGATGGAAATAAC
ATAGTGCATTCGTGGTTGCTTCTGGCTGCGGTAATTCCATTCCACTTTGTTTGTGCCTGT
CCCAAAGGTTTTGAACCTGATCAGAAAACTGTTGAGAAAGCACAACAAGCTGGAGTCAGC
AAAATCGAGATAACTAATGATCCAAAAGAAGCTGTTAGAGAAGCTGATGTTGTCTATGCA
GATGTCTGGGCCAGTATGGGACAAAAGGAAGAAGCCGCACATCGCCGCCAAGTATTTCAA
GGATTCCAGGTGGATGAACAACTTATGAAGCTAGCTGGAAAAAAAGCATACTTTATGCAT
TGTTTGCCTGCAGAAAGAGGAGTGGAAGTTACTGACGGTGTGATCGAAGCACCAAACTCC
ATTGTGTTCCCTCAAGCTGAGAATCGCATGCATGCACAAAATGCAATAATGCTTCATGTT
CTTGGCTTGTAAATGCCCTTCATTTGATTTAAAACACAATCTTCTTAGGAACTAGAAGCA
AATTGTTTCTTTTCTCCCTAAAACATTACTTTGTTTGAAACGTTGAAGAATTTAGATCAT
CATTGTCTATATAATTTGAACTATTCAATTATTAATTTAACGCTAGTTGAAAATATTCAC
TTTGAAAATATATTGTTATCTTATCAAGCAAGCTATTAATTATTTGAATCTAGACGGCG