Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g089160.2.1
CDS Infomation	Lrr receptor protein kinase, putative (AHRD V3.3 *** B9R7U7_RICCO)
Sequence	ATGTCTCCTCATTTTGCTGTTGATTCTTTAGCCAATTTTACTCACTTAACATCATTCAAC TCATCAGGTTTTGTTCTTTCAGGGCCAATACCTTATTGGTTTGGCCAAAAGTTAACTCAA CTTAAACACCTTGATCTTAGTTCAAGTTCAATTCTTGGTTCACTTCCATCCTCATTAGGA AGTTTAACTAATCTTGATTACATGTCTTTGTTTAACAATTCAATTACAGGAACTATACCT TTAGAACTTGGAAAGTTGAGATCTTTAAGGGTTCTTGATCTTTCTTGGAATTCACTTACT GGTGAAATCCCAAGTTCTGTTTCAAATATTATGAATCTGTCTGTTCTTGATTTGTCTTCA AATATCTTGTCTGGAAAAATCCCAGTTGAGTTTGGTTCATTTCTTGGACTTAAGTTACTT AACTTGTCATATAATAGTTTAAGTTCTTACATTCCTTCTGAAATTTCAAATCTTTCTGGA TTAGTTGAACTTGATCTTGGTTTTAATTACTTCTCAGGTTCATTGCCTGAGGGTTTATTA AGAATGAGAAATTTGAGTAAACTGTTAGTTGGGAATAATGAGTTAGAGGGTGCATTGTCA AGTAGTTTGTTTACTTCAAATGATTCTGTGTTGGAGTATATAAATCTTCGTTCGAATCGA TTCGAAGGCAAAGTTCCTGATGTTTTGTGGTTTTTGTCTGATCATTTGAGGGTTCTTGAT ATATCAGGGAACAATTTCACTGGTGTGGTTTCAAATAGTACCTATTTTAGTGTTACTGGT GCTTCATATAACCTTTCGAATAATCTTTTCTATGGGAATGTAACGTTTGATGTTCGGAGT TTTCAGTCAATTGATCTGTCTAAGAATTACTTTCAAGGACTAGCACCGGCTATATCTGGT GTTCGAGTTATGGATAATTGCTTTAAAGGGTTATTGAATCAGAGGAGTTTAGATGATTGT AGTAAGTTTTATGCTGATAGGGGTTTAGTTTTTGTTGATGGTGGAATCGGAACTCGAGTG CATAGAGCATCGAAGGGCAGGCATAAATGTTTGTTTGTCATGGTTGGAGTTTTTGGTGGA GTTGGTGTTCTTATGCTTATGGCATTAGTTATTTTATTGTTTTGGAAGATATGTTATAGA GGGAATACAAACGAAAGAGGCATATCGAATGTTAGTCCTGTTGTGGAAGGAGGTAATAAT CAGGCGGCACCAGTAAAGTTCTCTCGTGATACATCTGGTTCGATCGAATCATTTACTTAT GATCAGATACTAAAAGCCACTAGCAACTTCAATGAAACAGATCTTATCAAGAATGGTCAT ACAGGAGACATTTTCCGAGGCATATTGGAAGGCGGTGTCACCGTAGTTATCAAGAAAGTT AATGTACACCATATCGAAAAGGAAACGTACAAGTTGGAGTTGGATTTGTTAAACTGGACA ACACACCATAGGCTTGTGCCTTTTTTGGGACATTGCTTAGATCATGAGAATGAGAAATTC TTGGTCTATAAATATATGCCAAATGGAGATTTGTTCAATTTGTTGTCCCGGGATACGGAT TTAGAAGACGAAAACGAACAGTCTTTGGATTGGATAACAAGATTAAAAATTGCAACAGGA GTTGCAGAAGGCTTAGTTTATTTGCATCATGAGTGTAATCCTCCTCTTGTTCATAGAGAT GTTCAAGCTAGCAGTATCCTTCTCGACGATAAATTTGAAGTAAGGCTGGGAAGTTTGAGC GACGTGTGTGCACAGGAAGGTGATAGCCAGAATTTGATCACAAAGTTTTTCCGCACAACA AAGAATCCTGAGGGAGAGCCTGCTGGAACTTCATTTACAAGTTGCAGTACATATGATGTA TACTGTTTCGGTAAGGTCTTACTCGAGCTTGTAACTGGTAAGGTAGGCGCAAGTCACTTA GATGATGTCTCAACGAAGGAGTGGTTGGAAAAGCTTCTTCCTTTCATCACTATACGCGAT AAAGAACTAGTGTCAAAGATAGTCGATCCATCTTTAATTATAGACGACGACTTACTTGAA GAGATGTGGTCTGTAGCAATAGTAGCCAAAGCATGTCTTCATCCGAGGCCTTCTAGACGT CCTGAAATGAGACGAGTCTTGAAAGCTCTTGAGAACCCGTTCAAGGTTGTTAGGGAAGGA AGTTTCAACTCTATAAGGCTACGAAATACTTCATCGAGGCGATCATGGAGTGCTGCTTTT CTTGGTAGTTGGAATCTTAGCTCACAGGATAGTATCAATGCTAGTGGCCAAACAAGCAAA GAAGCTGGCATGAACCTGAAACAGTCAGGAAGAGTAGGATTATCTCATTCTATTAGCAGC GGGAACGAGCATTCATCATCGTGTAAGAGATCATCGAGTGAGATTTTCCCCGAACCTCAG GACACACTAGATATAGAGAGACAAGACATGAGCTAG

Peptide Sequence

PEP ID	Solyc12g089160.2.1
PEP Infomation	Lrr receptor protein kinase, putative (AHRD V3.3 *** B9R7U7_RICCO)
Sequence	MSPHFAVDSLANFTHLTSFNSSGFVLSGPIPYWFGQKLTQLKHLDLSSSSILGSLPSSLG SLTNLDYMSLFNNSITGTIPLELGKLRSLRVLDLSWNSLTGEIPSSVSNIMNLSVLDLSS NILSGKIPVEFGSFLGLKLLNLSYNSLSSYIPSEISNLSGLVELDLGFNYFSGSLPEGLL RMRNLSKLLVGNNELEGALSSSLFTSNDSVLEYINLRSNRFEGKVPDVLWFLSDHLRVLD ISGNNFTGVVSNSTYFSVTGASYNLSNNLFYGNVTFDVRSFQSIDLSKNYFQGLAPAISG VRVMDNCFKGLLNQRSLDDCSKFYADRGLVFVDGGIGTRVHRASKGRHKCLFVMVGVFGG VGVLMLMALVILLFWKICYRGNTNERGISNVSPVVEGGNNQAAPVKFSRDTSGSIESFTY DQILKATSNFNETDLIKNGHTGDIFRGILEGGVTVVIKKVNVHHIEKETYKLELDLLNWT THHRLVPFLGHCLDHENEKFLVYKYMPNGDLFNLLSRDTDLEDENEQSLDWITRLKIATG VAEGLVYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSDVCAQEGDSQNLITKFFRTT KNPEGEPAGTSFTSCSTYDVYCFGKVLLELVTGKVGASHLDDVSTKEWLEKLLPFITIRD KELVSKIVDPSLIIDDDLLEEMWSVAIVAKACLHPRPSRRPEMRRVLKALENPFKVVREG SFNSIRLRNTSSRRSWSAAFLGSWNLSSQDSINASGQTSKEAGMNLKQSGRVGLSHSISS GNEHSSSCKRSSSEIFPEPQDTLDIERQDMS*

Transcript Sequence

Transcript ID	Solyc12g089160.2.1
Transcript Infomation	Lrr receptor protein kinase, putative (AHRD V3.3 *** B9R7U7_RICCO)
Sequence	CAAATCTCCACTTTAGAACACAAAGCTTTACTTGATCTTAGATCATCTTTAAGCATCAGT GCAAAAAACTGGCCAAGAAAATCCAACCCTTGTACAAATTGGACTGGAATTCATTGCAAC AATGACAAAGTTGTGTCTATTAAGTTGACAGGACTAAGAAGAATTCACAAAGGGAACATG TCTCCTCATTTTGCTGTTGATTCTTTAGCCAATTTTACTCACTTAACATCATTCAACTCA TCAGGTTTTGTTCTTTCAGGGCCAATACCTTATTGGTTTGGCCAAAAGTTAACTCAACTT AAACACCTTGATCTTAGTTCAAGTTCAATTCTTGGTTCACTTCCATCCTCATTAGGAAGT TTAACTAATCTTGATTACATGTCTTTGTTTAACAATTCAATTACAGGAACTATACCTTTA GAACTTGGAAAGTTGAGATCTTTAAGGGTTCTTGATCTTTCTTGGAATTCACTTACTGGT GAAATCCCAAGTTCTGTTTCAAATATTATGAATCTGTCTGTTCTTGATTTGTCTTCAAAT ATCTTGTCTGGAAAAATCCCAGTTGAGTTTGGTTCATTTCTTGGACTTAAGTTACTTAAC TTGTCATATAATAGTTTAAGTTCTTACATTCCTTCTGAAATTTCAAATCTTTCTGGATTA GTTGAACTTGATCTTGGTTTTAATTACTTCTCAGGTTCATTGCCTGAGGGTTTATTAAGA ATGAGAAATTTGAGTAAACTGTTAGTTGGGAATAATGAGTTAGAGGGTGCATTGTCAAGT AGTTTGTTTACTTCAAATGATTCTGTGTTGGAGTATATAAATCTTCGTTCGAATCGATTC GAAGGCAAAGTTCCTGATGTTTTGTGGTTTTTGTCTGATCATTTGAGGGTTCTTGATATA TCAGGGAACAATTTCACTGGTGTGGTTTCAAATAGTACCTATTTTAGTGTTACTGGTGCT TCATATAACCTTTCGAATAATCTTTTCTATGGGAATGTAACGTTTGATGTTCGGAGTTTT CAGTCAATTGATCTGTCTAAGAATTACTTTCAAGGACTAGCACCGGCTATATCTGGTGTT CGAGTTATGGATAATTGCTTTAAAGGGTTATTGAATCAGAGGAGTTTAGATGATTGTAGT AAGTTTTATGCTGATAGGGGTTTAGTTTTTGTTGATGGTGGAATCGGAACTCGAGTGCAT AGAGCATCGAAGGGCAGGCATAAATGTTTGTTTGTCATGGTTGGAGTTTTTGGTGGAGTT GGTGTTCTTATGCTTATGGCATTAGTTATTTTATTGTTTTGGAAGATATGTTATAGAGGG AATACAAACGAAAGAGGCATATCGAATGTTAGTCCTGTTGTGGAAGGAGGTAATAATCAG GCGGCACCAGTAAAGTTCTCTCGTGATACATCTGGTTCGATCGAATCATTTACTTATGAT CAGATACTAAAAGCCACTAGCAACTTCAATGAAACAGATCTTATCAAGAATGGTCATACA GGAGACATTTTCCGAGGCATATTGGAAGGCGGTGTCACCGTAGTTATCAAGAAAGTTAAT GTACACCATATCGAAAAGGAAACGTACAAGTTGGAGTTGGATTTGTTAAACTGGACAACA CACCATAGGCTTGTGCCTTTTTTGGGACATTGCTTAGATCATGAGAATGAGAAATTCTTG GTCTATAAATATATGCCAAATGGAGATTTGTTCAATTTGTTGTCCCGGGATACGGATTTA GAAGACGAAAACGAACAGTCTTTGGATTGGATAACAAGATTAAAAATTGCAACAGGAGTT GCAGAAGGCTTAGTTTATTTGCATCATGAGTGTAATCCTCCTCTTGTTCATAGAGATGTT CAAGCTAGCAGTATCCTTCTCGACGATAAATTTGAAGTAAGGCTGGGAAGTTTGAGCGAC GTGTGTGCACAGGAAGGTGATAGCCAGAATTTGATCACAAAGTTTTTCCGCACAACAAAG AATCCTGAGGGAGAGCCTGCTGGAACTTCATTTACAAGTTGCAGTACATATGATGTATAC TGTTTCGGTAAGGTCTTACTCGAGCTTGTAACTGGTAAGGTAGGCGCAAGTCACTTAGAT GATGTCTCAACGAAGGAGTGGTTGGAAAAGCTTCTTCCTTTCATCACTATACGCGATAAA GAACTAGTGTCAAAGATAGTCGATCCATCTTTAATTATAGACGACGACTTACTTGAAGAG ATGTGGTCTGTAGCAATAGTAGCCAAAGCATGTCTTCATCCGAGGCCTTCTAGACGTCCT GAAATGAGACGAGTCTTGAAAGCTCTTGAGAACCCGTTCAAGGTTGTTAGGGAAGGAAGT TTCAACTCTATAAGGCTACGAAATACTTCATCGAGGCGATCATGGAGTGCTGCTTTTCTT GGTAGTTGGAATCTTAGCTCACAGGATAGTATCAATGCTAGTGGCCAAACAAGCAAAGAA GCTGGCATGAACCTGAAACAGTCAGGAAGAGTAGGATTATCTCATTCTATTAGCAGCGGG AACGAGCATTCATCATCGTGTAAGAGATCATCGAGTGAGATTTTCCCCGAACCTCAGGAC ACACTAGATATAGAGAGACAAGACATGAGCTAGTCATCCAGCGCGGATCTATGCAAAATG CATTTCTGCAGGCAGGGGTTTTGTAGGTATCAGGAGCTTCGATTTTTTATTACATGAGCA GTGGTACTATGATCGTTCTGAATACACGGGGTCTACATGCTACACACACGTTATGCTGTT GGTAAACTCTTTCCTTCTGCAACAGACGATCAAATCGGATCAGTATTTTTGAATACGTTG TGTTACATCATGTAACATGTAGTCTGTTTTTCCTCCTTTTCTTGTAGTGTGTCACAAATG CTCGTGTGCTTTGTAAACTTTCGAAAAGTTTACTCTTGTTCCTGTGATGATAGAACAAGT ATATAACTGTGTCAAGAAGAGTGTATACTATCTAATCCAGATTCACATTTTTCATGATCT CAAAAAGTATGATATAACCTGC