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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g088940.2.1
CDS Infomation

MAP kinase kinase kinase 87
Sequence

ATGCCATTTTCGAGGAAAACATTTTCATTGTTTTTAAGTTCTTCTGCTTCTACTTCACCT
TCTCATGAGTCTCCTAAGACTTCTGGAGGTGGAGGAGGAAAGCGGCTTACTCGTTTACGT
AAATTGAGACATGTTGGTGATGATGAGATTGATTTGCAGCATAATGATTTTGGTTCTCAA
TCTATGCCTGTTTCCCCTGATTCCTATAAGAATTCAGGATCATCAGGGTCTCAATCAACT
CAGATTAAACAGCGTTGTCGTTGGTCTAAATCCGTCGAGCCTCATCCTTTGCCATTACCT
GAGTTCAATTCTGTGCCAAAACAAAGTACTAGTGATGCTAATTTGCCTACCAGAGTACTC
CAAGGGGATGCTTCAAATCCTGCTGTTATAAGGGATCCTTCTCATCAAACTCCAGTGGAG
ATGGCAAATCCTGTGCATAAAAGATCATCTACTCCAACTTATCGTCGTCGACGTTTCAGT
CAGGATCAGAATTCTAAAAGTGTTGAAGAGAACTTCAGGCTTAATGTCCCTGCTAGAAGT
GCTCCAGGCAGTGGTTTTACAAGTCCGAATCTTAGCCCGATAAGATATAGCACAGTAGAC
CTTTTCCATCCTACATTTCATCAGGCATCACCACCTACAGCCACTTCTTCGGATAGATGG
GTAGGTTATTCTGCCCAACTTTTGACAGCAAGGGTTACACAAAGTGCTGATCATTCTCCC
CTTAGTAGCCCAGCTCGACAAAATCTAGTAAACAAAACTTTGAATCACCAAAATGTTGCT
GTGCATTCACATCACAAATCACTCCCGGAAAGTCCTGTGGATTGGCCTGAAGGCAATAAT
GTGCACCCTCTACCACTTCCTCCCGGAGTTTCACAACAGCCACAGTTACCCACCACTCAA
AACAATACGGATAAACCAGATACACCATATGTAAAAGGCCAATGGCAAAAGGGGAAACTT
TTAGGTCGTGGTACTTATGGAAGTGTATATGAAGCTACTAACCGTGAAACCGGTGCTTTG
TGTGCCATGAAAGAAGTTGATCTCAATCCAGATGATCCTAAATCTGCCGAATGTATAAAG
CAGCTAGAACAGGAAATACGAGTTCTCCGACAGTTGAAGCACCAAAATATTGTTCAATAT
TACGGCAGTGAAATAATGAAAGATAGTTTTTGCATATATCTGGAATATGTTCATCCAGGA
TCAATTAATAAGTTTGTCCGGGATCATGGTGGAGCTATGACAGAGTCAATAGTTCGAAAC
TTTACGAGACATATAGTATCAGGCCTGGCTTACTTGCACAGTACTAAGACGATACACAGG
GACATAAAGGGGGCAAATTTGCTTGTCGATGCATCAGGAATCGTCAAGCTTGCAGACTTT
GGATTAGCAAAACATCTGTCGAGTCATGCAACTGAGCTATCGCTAAAAGGGAGTCCACAC
TGGATGGCTCCAGAGGTAATGCAGGCTATGTTACGGAAAGATGCCAATCCAGAACTTGCC
TGTGCTATTGATATATGGAGTCTAGGTTGTACTGTAATTGAAATGTTTACTGGACAGCCC
CCTTGGAGTGGATTAGACGGGGTGAAAGCTATGTTCAGTGCACTAAACAAATCACCACCT
GTACCAGAAACGTTGTCTTCGGAAGGAAAGGATTTCCTCCGATGCTGCTTTCAGAGGAAA
CCTGCAGATAGACCAACAGCTTTGATGCTACTTGAGCATCCTTTCTTAAGTAATACTAAT
TCGCGTGAAAATAGTGCTACTGTTTCAGGTTCCTCAGAAGATTTTTCGCGGATGAAATTG
CATAGTCCAAAGGACATGACAAACCATATCATGGAATTGAATTCATCTAGGCAAACAAAA
TCTCCATATAACGGGTACTAG

Peptide Sequence

PEP ID

Solyc12g088940.2.1
PEP Infomation

MAP kinase kinase kinase 87
Sequence

MPFSRKTFSLFLSSSASTSPSHESPKTSGGGGGKRLTRLRKLRHVGDDEIDLQHNDFGSQ
SMPVSPDSYKNSGSSGSQSTQIKQRCRWSKSVEPHPLPLPEFNSVPKQSTSDANLPTRVL
QGDASNPAVIRDPSHQTPVEMANPVHKRSSTPTYRRRRFSQDQNSKSVEENFRLNVPARS
APGSGFTSPNLSPIRYSTVDLFHPTFHQASPPTATSSDRWVGYSAQLLTARVTQSADHSP
LSSPARQNLVNKTLNHQNVAVHSHHKSLPESPVDWPEGNNVHPLPLPPGVSQQPQLPTTQ
NNTDKPDTPYVKGQWQKGKLLGRGTYGSVYEATNRETGALCAMKEVDLNPDDPKSAECIK
QLEQEIRVLRQLKHQNIVQYYGSEIMKDSFCIYLEYVHPGSINKFVRDHGGAMTESIVRN
FTRHIVSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGLAKHLSSHATELSLKGSPH
WMAPEVMQAMLRKDANPELACAIDIWSLGCTVIEMFTGQPPWSGLDGVKAMFSALNKSPP
VPETLSSEGKDFLRCCFQRKPADRPTALMLLEHPFLSNTNSRENSATVSGSSEDFSRMKL
HSPKDMTNHIMELNSSRQTKSPYNGY*

Transcript Sequence

Transcript ID

Solyc12g088940.2.1
Transcript Infomation

MAP kinase kinase kinase 87
Sequence

TTCAACAACAAAACCAACTACTTGTTGAAGAATTTCCATTTTCACAAGCCTTAAAGGCTA
AAAATCCCACAACCCCACAAGCAATTCTTGAAAAAAAAAATCTCATTTTTTTGTCATCTT
GACATGTTTTTAGTACTAATAGAAGCTTAGTGTTCTAATATCTCTATTCTTGACATAAAA
ATCTCAGCTTTTTGTCATCTTGACATGTTTTTAGTACTTATAGAAGCATAGTATTGTAAT
TTTTCTATTCTTGAAAAAAAAATCTCATTTTTTTGTCATTTTGACATGTTTTTAGTACTA
ATAGAAGCATAGTGTTGTAATTTTTCTATTCTTGAAAAAAAAAATCTCATTTTTTTGTCA
TCTTGACATGTTTTTAGTACTCAAAGTGTTGTAATTTCTCTATTCTTGAAAAAAAATCTC
ATTTTTTTTGTATCTTGATATGTTTTTAGTACTCATAGTGTTGTAATTTCTCTATTCTTG
AAAAAAAAAATACATTTTTTTGTATCTTGATATGTTTTTAGTACTCATAGTGTTATAATT
TCTCTGTTCTTTGAAAAAAAAAATCTATCTTTTTGTCATTTTGATATGTTTTTAGTACTA
ATAGAAGGATAGTGTTCTAATTTCTCTATTCTTGAAAAAAAAATCTCACCTTTTTTATGA
TCTTGACATGTTTTTAGTACTAATAGAAGCATATAGTAGTTTAATTTCTTTAATCTATTC
TTGAAGAGTTTCAATTAGCCTAAATCCCACAACCCCACCAAGCAATTCTTGAAATTTTTT
TGCTCAAATTTTGTCCTTATGCCATGTTTTTAGTACTAGTAGAAGCATAGTGAAGATTTA
CTACTTATCTTTTTATACCCCTCAAGCAATTCTTGATTTTTTTTGCTCAATTTTGGTCCA
TATGACATAGTTTTTTTTAGTAATGGATATTGTTGTTATTTTTCTTGATCCTTAAGTACA
TATCTTGATATATTGATACTCCTTCTGAATCTACTGACTTTGGATCCTGAATTCGCCTGT
TTGAACAATTGAAATGCCATTTTCGAGGAAAACATTTTCATTGTTTTTAAGTTCTTCTGC
TTCTACTTCACCTTCTCATGAGTCTCCTAAGACTTCTGGAGGTGGAGGAGGAAAGCGGCT
TACTCGTTTACGTAAATTGAGACATGTTGGTGATGATGAGATTGATTTGCAGCATAATGA
TTTTGGTTCTCAATCTATGCCTGTTTCCCCTGATTCCTATAAGAATTCAGGATCATCAGG
GTCTCAATCAACTCAGATTAAACAGCGTTGTCGTTGGTCTAAATCCGTCGAGCCTCATCC
TTTGCCATTACCTGAGTTCAATTCTGTGCCAAAACAAAGTACTAGTGATGCTAATTTGCC
TACCAGAGTACTCCAAGGGGATGCTTCAAATCCTGCTGTTATAAGGGATCCTTCTCATCA
AACTCCAGTGGAGATGGCAAATCCTGTGCATAAAAGATCATCTACTCCAACTTATCGTCG
TCGACGTTTCAGTCAGGATCAGAATTCTAAAAGTGTTGAAGAGAACTTCAGGCTTAATGT
CCCTGCTAGAAGTGCTCCAGGCAGTGGTTTTACAAGTCCGAATCTTAGCCCGATAAGATA
TAGCACAGTAGACCTTTTCCATCCTACATTTCATCAGGCATCACCACCTACAGCCACTTC
TTCGGATAGATGGGTAGGTTATTCTGCCCAACTTTTGACAGCAAGGGTTACACAAAGTGC
TGATCATTCTCCCCTTAGTAGCCCAGCTCGACAAAATCTAGTAAACAAAACTTTGAATCA
CCAAAATGTTGCTGTGCATTCACATCACAAATCACTCCCGGAAAGTCCTGTGGATTGGCC
TGAAGGCAATAATGTGCACCCTCTACCACTTCCTCCCGGAGTTTCACAACAGCCACAGTT
ACCCACCACTCAAAACAATACGGATAAACCAGATACACCATATGTAAAAGGCCAATGGCA
AAAGGGGAAACTTTTAGGTCGTGGTACTTATGGAAGTGTATATGAAGCTACTAACCGTGA
AACCGGTGCTTTGTGTGCCATGAAAGAAGTTGATCTCAATCCAGATGATCCTAAATCTGC
CGAATGTATAAAGCAGCTAGAACAGGAAATACGAGTTCTCCGACAGTTGAAGCACCAAAA
TATTGTTCAATATTACGGCAGTGAAATAATGAAAGATAGTTTTTGCATATATCTGGAATA
TGTTCATCCAGGATCAATTAATAAGTTTGTCCGGGATCATGGTGGAGCTATGACAGAGTC
AATAGTTCGAAACTTTACGAGACATATAGTATCAGGCCTGGCTTACTTGCACAGTACTAA
GACGATACACAGGGACATAAAGGGGGCAAATTTGCTTGTCGATGCATCAGGAATCGTCAA
GCTTGCAGACTTTGGATTAGCAAAACATCTGTCGAGTCATGCAACTGAGCTATCGCTAAA
AGGGAGTCCACACTGGATGGCTCCAGAGGTAATGCAGGCTATGTTACGGAAAGATGCCAA
TCCAGAACTTGCCTGTGCTATTGATATATGGAGTCTAGGTTGTACTGTAATTGAAATGTT
TACTGGACAGCCCCCTTGGAGTGGATTAGACGGGGTGAAAGCTATGTTCAGTGCACTAAA
CAAATCACCACCTGTACCAGAAACGTTGTCTTCGGAAGGAAAGGATTTCCTCCGATGCTG
CTTTCAGAGGAAACCTGCAGATAGACCAACAGCTTTGATGCTACTTGAGCATCCTTTCTT
AAGTAATACTAATTCGCGTGAAAATAGTGCTACTGTTTCAGGTTCCTCAGAAGATTTTTC
GCGGATGAAATTGCATAGTCCAAAGGACATGACAAACCATATCATGGAATTGAATTCATC
TAGGCAAACAAAATCTCCATATAACGGGTACTAGTGACTTATCGAGCCCTTCTCTTTGCT
TTCGTAAATGTTTGGTTCATTTCAAGAGTACTCTTTAGTCAATGAAATCATCGATCGTTC
CAATTGACCATTATGCTTATCTTACACAACAAAGGGAAACTTGTGTTCATGTTTCAGTGA
AACAAGCCATCAATCACATTCTGTAACGTGCGATTATGGAGCAACTTCTCACCACTCTCC
TCGTTCAACACTCGAAATACTTCCTTGTATTTCTTCACCAGAGCTGAACCCTAGTACATT
TGCACCAGCCAAGTCCTCAAATAGTATTTTCTCTCCTTTGAACTGAAAATACAAGTGCTT
ATGTGATATT