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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g088900.2.1
CDS Infomation

succinate dehydrogenase 5 (AHRD V3.3 *** AT1G47420.1)
Sequence

ATGCAGAAATTGAAGCTGATACGATCACTCTATCGTTCTGTATATCGCAGATCTTCAGCT
TTCTCAGTTTCTACCGCCGCAGCTGCCGCCGTCAACCACCACTTCCATCGGGACCTTCAT
TTTTCAGCTTCTCCTAGAACCCCTTTTCGTGAATTGCGACATCCTTTGACAAAGGCAATA
GGAAGCACACGTTCTTTTAGTGAGGATGTGACCGACATGCCTGACATAGAAGATTTGGAG
ATCAAACGAGCTTTTAAGGACTTGATGGCTGCAAGCTGGGATGAGCTCCCAAATGCAGTT
GTTGGTGATGCAGAGAATGCATTGACAAAAAGTACTGATGACAAAGCTGGTCAGGAAGCC
TTGATTAATGTTTTCCGTGCAGCAGAGGCAGTGGAGGAGTTCACAGGAATTCTCACATCT
CTGAAAATGGAGATGGATGACGCGATTGGTTTAAGTGGTGAGAATGTGAAGCCTATGTCA
AAAGAATTCTCTGAAGCATTCCAAACAATACTTCAACGTTACAACACTTACTTAAGTGCT
TTTGGGTTAGAAGAGGTATACTTGAAGAAGAAAGTGGAGATGGAACTAGGGACAAAGATG
ATACACTTGAAAATGAGATGCAGTGGCCTTGATTCCGAATGGGGAAAGGTTACAGTACTT
GGGACTTCAGGACTGGCTGGTTCCTATGTTGAGCAAAGAGCATAA

Peptide Sequence

PEP ID

Solyc12g088900.2.1
PEP Infomation

succinate dehydrogenase 5 (AHRD V3.3 *** AT1G47420.1)
Sequence

MQKLKLIRSLYRSVYRRSSAFSVSTAAAAAVNHHFHRDLHFSASPRTPFRELRHPLTKAI
GSTRSFSEDVTDMPDIEDLEIKRAFKDLMAASWDELPNAVVGDAENALTKSTDDKAGQEA
LINVFRAAEAVEEFTGILTSLKMEMDDAIGLSGENVKPMSKEFSEAFQTILQRYNTYLSA
FGLEEVYLKKKVEMELGTKMIHLKMRCSGLDSEWGKVTVLGTSGLAGSYVEQRA*

Transcript Sequence

Transcript ID

Solyc12g088900.2.1
Transcript Infomation

succinate dehydrogenase 5 (AHRD V3.3 *** AT1G47420.1)
Sequence

TTATAATTTATAATATTTTTTCGTATAATTCTCTAATATATAGATTCGAAAATTAGTCAA
ATTGATTAGCGCAAAACAAAAAGGGTGGGTGTGAGTGACTACAAAACTTGGGAGGAGTTG
TAAAAAGTTCATTGGGACTCTTGAAAATTTTCAATCTGCTCATCAAGTAAAGCAAAAACT
TACCATAAAATGCAGAAATTGAAGCTGATACGATCACTCTATCGTTCTGTATATCGCAGA
TCTTCAGCTTTCTCAGTTTCTACCGCCGCAGCTGCCGCCGTCAACCACCACTTCCATCGG
GACCTTCATTTTTCAGCTTCTCCTAGAACCCCTTTTCGTGAATTGCGACATCCTTTGACA
AAGGCAATAGGAAGCACACGTTCTTTTAGTGAGGATGTGACCGACATGCCTGACATAGAA
GATTTGGAGATCAAACGAGCTTTTAAGGACTTGATGGCTGCAAGCTGGGATGAGCTCCCA
AATGCAGTTGTTGGTGATGCAGAGAATGCATTGACAAAAAGTACTGATGACAAAGCTGGT
CAGGAAGCCTTGATTAATGTTTTCCGTGCAGCAGAGGCAGTGGAGGAGTTCACAGGAATT
CTCACATCTCTGAAAATGGAGATGGATGACGCGATTGGTTTAAGTGGTGAGAATGTGAAG
CCTATGTCAAAAGAATTCTCTGAAGCATTCCAAACAATACTTCAACGTTACAACACTTAC
TTAAGTGCTTTTGGGTTAGAAGAGGTATACTTGAAGAAGAAAGTGGAGATGGAACTAGGG
ACAAAGATGATACACTTGAAAATGAGATGCAGTGGCCTTGATTCCGAATGGGGAAAGGTT
ACAGTACTTGGGACTTCAGGACTGGCTGGTTCCTATGTTGAGCAAAGAGCATAAGCCTTC
AATGATGGCTGAAAAGTCAGAAGTGTTTTCGCCTTCAAGTCACTTACGTAACATTTTCCT
GGAAAAAGAAAAGGAAGTTTTAGATAATACAGGATGATATTGATGTGATCCGTTAAATTG
CACTCTTCTTTCGCAAGTTTTATAATGTGATAGCAGCAATATGTAGTTGATACTAATCCT
AATAACTTCTTCAAGGAGACAGTTTCCTGAGTATTCAGAATGAGAGTGTTTTATGTCAAT
TGATTCCGGTTTACTGATGAATTTGGCGCTGTGATTTAATTTTTCTTGATTGATTATTGG
ACATGACACTGTGTGGTAGTAGTCAGTTCACTT