Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g088830.2.1
CDS Infomation	Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *** WEB1_ARATH)
Sequence	ATGGAAGATGTTAAAGATCTGAAGCTACACGCCTCGGAGTCCTCTCCGGGGGAGGATCGA TCACACAGTGCGATTCAAACCAGCCAAGATGCAGATGAAAAACCAAACTCCGAGAATCAA CAACTAAACGTGGATGCTTCGGAGCATGTAGAAGAGGCTACTAAAAGCTCGTCGTTGGAG AAGAGAGAGACTCATCCAACAGGAGCTACTATGGTTAATCAGGACAACTCGTCTCAACCT GTACATAGTCCTAAGCCATCGGAGCCTCCTATCGATACAAATGGTTCCAAAGAGGAAGAG CATATTCAATCTAATAGTAGTACCAAAAGTGCTGATGATTCGTGTTCTACTTCCCACGTC AAAGAGACGAAACCTGTAAATACTACTCGTGTAGAGTCATCGGATAACATTGACAAGTCT CCCACTCTCAGAATCAAGATTCCAGGGCCTACAGCTCAGTCTAAGCAGCCTGAGAATGTT GATGCAAACAGAGTTAACATCGATACAGCAGCACCTATCCAGTCTGTGAAACAGGCAGTT TCAAAGTTTGGAGGGATTGTCGACTGGAAGGCTCATCGAAAACAGACAGTCGAGAGACGG AATCTTATCGAGCAAGAACTAACAAAAGTGCAAGAGGAGATCCCATTGTATAAGAAACAA TGTCAGGATGCAGAAGATGCAAAAGTGCTAGTTTTGAAAGAACTAGATAGCACTAAGAGA CTCATAGAAGAGTTGAAGCTTAATCTAGAGAGAGCACAAACAGAAGAGCAACAAGCAAGA CAGGATTCGGAACTTGCCACGCTCAGGGTCGAAGAGATGGAGCGGGGTATTGCTGATGAC TCTAGTATTGCAGCTAAAGCACAGCTTGAAGTTGCCAGAGCTAGGCTTGAAGCTGCAGTG TCAGAGCTAAAATCTGTTAACTCCGAATTAGATGTTCTCCGTAAGGATTATGATTTATTG ATATCCGAAAAAGATGTTGCTGTGGAAAAAGCAGAAGAAGCTGTTTCGGTATCAAATAAA GTTGAGAAGACAGTTGAGGATTTGACAATTGAGCTCATTACTTCAAAGGATGCTTTGGAG GCTGCACATGCTGCACATCTAGAAGCCGAGGAACATAGAGTCGGAGTAGCTATGGCAAGA GAGCAAGATACTCTAAACTGGGAGAACGAACTGAAGGAGGCGGAAGAAGAGCTTGAGAGG CTAAACCAGCAAATAATGTCTGCAAAGGATCATAAAGCAAAATTAGATACTGCTTCATCT TTGTTACAAGATCTCAACATTGAGTTAGCTGCTTATATGGAATCAAAGTTGAAACAGGAG GCTGATGAAGAAGGGAACATGAAAGGCGAGAAATTAGAGATGGATAAAAGAAGTCATCAT GACATACAAGGAGTTGTGGCATCAGCTAAGAAGGAACTCGAAGAAGTGAAACTCAATATT GAGAAAGCAACAGCTGAAGTAGAATGCCTGAAAGTAGCAGCAGTTGCATTAAAGGCAGAA TTGGAAAAGGAAAAATCAGAACTAGCTTCCATACAACAGAGAGAAGGAATGGCAGCGATT GCCGTTACATCTCTTGAAGCTGAGTTGAACCGAACAAAGTCAGAGATTTCCCTTTTGCTG ATAAAGGAAAAAGAAGCAAGAGAAAAGATGGTGGATCTACCGAAGCAACTGCATGAGGCT GCACAAGAGGCTGATCGTGCAAAGTTACTTGCTCAAACAGTTCGGGAAGAGCTGAGCAAG GCAAAGGAAGAGGCGGAGCAAGCAAAGGCAGCAACTAGCACCTTGGAAAGTAGACTGCTT GCAGTGAAAAAAGAGATAGAGGCTGCAAAAGCTTCAGAGAAATTGGCCATAGCAGCTATC AGTGCTCTACAAGAGAGCGAATCTACTGAAAGCACAATGGATGAGACAACTGGTGTAACA CTTTCTTTAGAGGAGTATTATGAACTCAGCAAGCAGGCCTTTGAGGCAGAGAAACAAGCT AATACCAGAGTGTCTGCTGCTATGTCCAAAATAGAAGTAGCCAAGGAATCAGAGTTGAGT AGTCTTAACAAGCTCGAGGAGGTTAATGTTGCGATGACTGAAAAGAAGGAAGCACTAGAA ATCGCACTGCAAAAGGCCGAGAAAGCCAAAGAAGGAAAATTGGCAGCAGAGCAAGAGCTG AGGAAATGGAGAGCGGAGCATGAGAAAAGACGGAAATCTGGTAAATCTGTTACCCCGGTA AATAAAACAATGAGCTCAAAAATGAGCTCTGAGGAGAATAAAGAATCAAAAGCTTCTGAA GATGCAGTACCTCATCAAACCTCAAATCCAAAAGAAAATGTACAAACAAAGAGTGAAACC GATTCATCTCAGGAAGTGAAGGTCACAAAGAAAAAGAAGAAGTCCTTCTTCCCCCGCGTC TTAATGTTTCTGGGCAGAAAGAAAGCACAGGCCAAGGCAAGATGA

Peptide Sequence

PEP ID	Solyc12g088830.2.1
PEP Infomation	Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *** WEB1_ARATH)
Sequence	MEDVKDLKLHASESSPGEDRSHSAIQTSQDADEKPNSENQQLNVDASEHVEEATKSSSLE KRETHPTGATMVNQDNSSQPVHSPKPSEPPIDTNGSKEEEHIQSNSSTKSADDSCSTSHV KETKPVNTTRVESSDNIDKSPTLRIKIPGPTAQSKQPENVDANRVNIDTAAPIQSVKQAV SKFGGIVDWKAHRKQTVERRNLIEQELTKVQEEIPLYKKQCQDAEDAKVLVLKELDSTKR LIEELKLNLERAQTEEQQARQDSELATLRVEEMERGIADDSSIAAKAQLEVARARLEAAV SELKSVNSELDVLRKDYDLLISEKDVAVEKAEEAVSVSNKVEKTVEDLTIELITSKDALE AAHAAHLEAEEHRVGVAMAREQDTLNWENELKEAEEELERLNQQIMSAKDHKAKLDTASS LLQDLNIELAAYMESKLKQEADEEGNMKGEKLEMDKRSHHDIQGVVASAKKELEEVKLNI EKATAEVECLKVAAVALKAELEKEKSELASIQQREGMAAIAVTSLEAELNRTKSEISLLL IKEKEAREKMVDLPKQLHEAAQEADRAKLLAQTVREELSKAKEEAEQAKAATSTLESRLL AVKKEIEAAKASEKLAIAAISALQESESTESTMDETTGVTLSLEEYYELSKQAFEAEKQA NTRVSAAMSKIEVAKESELSSLNKLEEVNVAMTEKKEALEIALQKAEKAKEGKLAAEQEL RKWRAEHEKRRKSGKSVTPVNKTMSSKMSSEENKESKASEDAVPHQTSNPKENVQTKSET DSSQEVKVTKKKKKSFFPRVLMFLGRKKAQAKAR*

Transcript Sequence

Transcript ID	Solyc12g088830.2.1
Transcript Infomation	Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *** WEB1_ARATH)
Sequence	GGCGAGCTGATAAACTCGCTTTTTTTCTTTTCTTATTCTTCTTTTTCATATCCTCATTTT TTAATCCAAATTTATTTATTTTATTTATTTGATTCATTCATAAAATCATTAAAAATTTAT CTCAAAATTTTGTAATTTATTATTTTATATAGTTAATTTTGGACAAAAAAAATTTATACT TTTCAATTACTTTTATATATATTTTTTGGAGGATATTGAAATAGCTTTCTGGTCTTCACT TTGGTTATCCTTATTTTCTTGACTGGAAAATGGAAGATGTTAAAGATCTGAAGCTACACG CCTCGGAGTCCTCTCCGGGGGAGGATCGATCACACAGTGCGATTCAAACCAGCCAAGATG CAGATGAAAAACCAAACTCCGAGAATCAACAACTAAACGTGGATGCTTCGGAGCATGTAG AAGAGGCTACTAAAAGCTCGTCGTTGGAGAAGAGAGAGACTCATCCAACAGGAGCTACTA TGGTTAATCAGGACAACTCGTCTCAACCTGTACATAGTCCTAAGCCATCGGAGCCTCCTA TCGATACAAATGGTTCCAAAGAGGAAGAGCATATTCAATCTAATAGTAGTACCAAAAGTG CTGATGATTCGTGTTCTACTTCCCACGTCAAAGAGACGAAACCTGTAAATACTACTCGTG TAGAGTCATCGGATAACATTGACAAGTCTCCCACTCTCAGAATCAAGATTCCAGGGCCTA CAGCTCAGTCTAAGCAGCCTGAGAATGTTGATGCAAACAGAGTTAACATCGATACAGCAG CACCTATCCAGTCTGTGAAACAGGCAGTTTCAAAGTTTGGAGGGATTGTCGACTGGAAGG CTCATCGAAAACAGACAGTCGAGAGACGGAATCTTATCGAGCAAGAACTAACAAAAGTGC AAGAGGAGATCCCATTGTATAAGAAACAATGTCAGGATGCAGAAGATGCAAAAGTGCTAG TTTTGAAAGAACTAGATAGCACTAAGAGACTCATAGAAGAGTTGAAGCTTAATCTAGAGA GAGCACAAACAGAAGAGCAACAAGCAAGACAGGATTCGGAACTTGCCACGCTCAGGGTCG AAGAGATGGAGCGGGGTATTGCTGATGACTCTAGTATTGCAGCTAAAGCACAGCTTGAAG TTGCCAGAGCTAGGCTTGAAGCTGCAGTGTCAGAGCTAAAATCTGTTAACTCCGAATTAG ATGTTCTCCGTAAGGATTATGATTTATTGATATCCGAAAAAGATGTTGCTGTGGAAAAAG CAGAAGAAGCTGTTTCGGTATCAAATAAAGTTGAGAAGACAGTTGAGGATTTGACAATTG AGCTCATTACTTCAAAGGATGCTTTGGAGGCTGCACATGCTGCACATCTAGAAGCCGAGG AACATAGAGTCGGAGTAGCTATGGCAAGAGAGCAAGATACTCTAAACTGGGAGAACGAAC TGAAGGAGGCGGAAGAAGAGCTTGAGAGGCTAAACCAGCAAATAATGTCTGCAAAGGATC ATAAAGCAAAATTAGATACTGCTTCATCTTTGTTACAAGATCTCAACATTGAGTTAGCTG CTTATATGGAATCAAAGTTGAAACAGGAGGCTGATGAAGAAGGGAACATGAAAGGCGAGA AATTAGAGATGGATAAAAGAAGTCATCATGACATACAAGGAGTTGTGGCATCAGCTAAGA AGGAACTCGAAGAAGTGAAACTCAATATTGAGAAAGCAACAGCTGAAGTAGAATGCCTGA AAGTAGCAGCAGTTGCATTAAAGGCAGAATTGGAAAAGGAAAAATCAGAACTAGCTTCCA TACAACAGAGAGAAGGAATGGCAGCGATTGCCGTTACATCTCTTGAAGCTGAGTTGAACC GAACAAAGTCAGAGATTTCCCTTTTGCTGATAAAGGAAAAAGAAGCAAGAGAAAAGATGG TGGATCTACCGAAGCAACTGCATGAGGCTGCACAAGAGGCTGATCGTGCAAAGTTACTTG CTCAAACAGTTCGGGAAGAGCTGAGCAAGGCAAAGGAAGAGGCGGAGCAAGCAAAGGCAG CAACTAGCACCTTGGAAAGTAGACTGCTTGCAGTGAAAAAAGAGATAGAGGCTGCAAAAG CTTCAGAGAAATTGGCCATAGCAGCTATCAGTGCTCTACAAGAGAGCGAATCTACTGAAA GCACAATGGATGAGACAACTGGTGTAACACTTTCTTTAGAGGAGTATTATGAACTCAGCA AGCAGGCCTTTGAGGCAGAGAAACAAGCTAATACCAGAGTGTCTGCTGCTATGTCCAAAA TAGAAGTAGCCAAGGAATCAGAGTTGAGTAGTCTTAACAAGCTCGAGGAGGTTAATGTTG CGATGACTGAAAAGAAGGAAGCACTAGAAATCGCACTGCAAAAGGCCGAGAAAGCCAAAG AAGGAAAATTGGCAGCAGAGCAAGAGCTGAGGAAATGGAGAGCGGAGCATGAGAAAAGAC GGAAATCTGGTAAATCTGTTACCCCGGTAAATAAAACAATGAGCTCAAAAATGAGCTCTG AGGAGAATAAAGAATCAAAAGCTTCTGAAGATGCAGTACCTCATCAAACCTCAAATCCAA AAGAAAATGTACAAACAAAGAGTGAAACCGATTCATCTCAGGAAGTGAAGGTCACAAAGA AAAAGAAGAAGTCCTTCTTCCCCCGCGTCTTAATGTTTCTGGGCAGAAAGAAAGCACAGG CCAAGGCAAGATGATGATCTCTGCTCCATTTTTCTTGGTTTGAGAAGGATTTTAGAGGGC AATAAGTTTTTCATAGGTTTGGCTCTGTCAGTAAGCCTTTGCCTATTAAAGTTGTTGACG GCTTCAAATGTGTACTCCTGCTAGTTCTGCATAAAAGCTAGCAGCAATTCAAACCTTTGG CCTCGTGAAGATATGACTTTCCTTGTGTTTCATGTTCGTATGGGTTATATAATGCAACAA CACATCAATTTTTCCTTTCACTTGGCTTACCATTTCAAAGCTAATTGCTTCACAATCCTA GTTCTATGTTCTTTATTATCCTAATACTTTTGCTTGTTTGTAATAGTTTCATTCATTTTA TTGCATATAGTCTGATAAATTGTTGTAACGAATCGAGTATTTTCTTTAGAAGATAATCTT TGTAATTTAATGTATTTATGCTGAACCTAACTTTCTGTGGTGTTAAAATCATTCTAAGAT CTCCTAGCCTTCAATCTTTCTATGTTGAAACCATATGATAAAAACTCATTGTTACATATG CAATGCCTATTATTTACCTCAAATGAACATAATCTGTGTTACTTCTTCTGGTATAAACCA GTAGAAGTTTATCTCGCGCACAATAGGTGATGGCAAATCATGCTAGTTTTACCTCTCAGT CCATTTCTCATGTGCGCGAGCTTAATCCCTTTTAGTAGATCTTTACAAGACCTATAAAGG ATGAGTCCTTTTGAGATACTATTCACAGAAAAACTGATATTTCCCATATATGTTTTCCTG TACATTTACCATTACATGGTGAAGGTCAGAGAGGATAAAAGTGAAACTCAAAAAACATAT GAGAAATGTTGACTGTTTATTCCCCTTATATACACACAAGCAATTTCTGCTTCTTGTCCT CAGTAGAAAGGACATGCAAAGGGGACTC