Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g088740.2.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT5G42940.2)
Sequence	ATGCAGGGGCAACAGAATACCGTTGGTTCGCTCCAAGAAACTTTAGGTTTTAATCATGGT TCGACGCCTAGTGAAGGTGGTGTAGATCAACAGATATGTTGGAGTAATTTGCAAAATTCT GCACAGAATCACCTGCCTGATTATATGGTTTCTTCAAATGCGACTGATATTCCATTCTTC AATCCTATGAGCCAAGAGAGACAGAATGTAACCAGGGGGAGTTTAGGAGAATCCAGCTCC TCTATTGCACCGAATTCTGCAAGTTGGAGTGAACAGAAAGCAGATCATGGATGGTCATCC GCAATGACTACATATAATGGACCTTCACTAATCTGTAATGAACAGCAATGTGGGTCTTCT AACATTATGTCATTGAATGATTTTTTTTCTCAAGGTTCTAGTTCTAGCACCATTCCTCAT GAAATCAACGGGAATCCGGCATTTGAGGGGCGCAGTGACAATAATGACGATGGCTGTCAA GTGATGGAGTGTACTCCATACAATTCTGTTAGACCAGGAAAAGAGCGAATGTCATCTGCT TGTACTTATTTAGGTAATGGGTGTTCGACGGATGATAGTGGTGATGGCAGGCCAGAAAGT TCATCAGATTCTAGGCGCTTTTGTAAGAGAAAAACACTTGAAGGATATCTAGCACAATCT TCAGGAAGTGGAAGTTCTGATTATATTCCTCTTGCTGAAAATAGCATATGGCATTCTGGA ACTGCATCACATAGTATGAGTACAGGTGCAAATATCTCTGCTCCAACTGAAAGTGTCAGA AGCATCAATATGTCTGAGCATGTGATTCCAAGACTTGGGCTTACCATGGGAGGAGCCGTT GCGGTAACTCCCGTTGGTACTCCGGCTTCAAGAAGTGCAGAAAGTTCTCATAGAAATTTC AGGGTGAGGATTGATGGCTCACCTCAGCAAGATTATCTTCCCAGTAATATCTTTCCTGAT GTGGATAATGTTGGAAATGTTAATCGGTCATCTGAACAGCAATTACCAGAGTTACTTCCT AATATCCCTTTGGATTTGAGGTCTGTGCCTGCTGCAGACAGTGGAAATACTCAAAGGCAG CCTGTTGTAATGCATGCTTCGTCTCTGCATCGACGTGCACAGACTAGGTGGAGTTCAGCA TCAAGTTCCAGAACTGGCAGCTCATCAAGTTCTGCGCGAGAGAGAAATTCAGTAACATTT GAAGAGCCTAACTCAAGAATTGTGTCAAGAAACATCTCACAACATCCTATGTTCATACCT TCAACTAATGGGAGAAACTTGAACCAAAATCCTGCCAGCTTGAATTTAGCTGGAAGAAAT GTTTCTGTTGCTGGAAATGTCGCATCCAGTTCAGGGGTCCAGTCATCTTCTCCTACTAGG GTTCTCCACAGATCTCCTCAATATCACCGGAGGCTGTCAGAATTAGTCCGTAGATCGTTG TTATCTCCAGCTAGCGCTGGATCTGGAGGTGTTAATGGTAATAGTCGTCCACTACGTTTG AGTTCTCCTATCTCACAGGAGATGGAACTTCCTGGAAACCATGAGCATCGCACATCAAGT GCACTGGAGCGACATCGTGATGATGCTGTAGGACTCTCCAACTCGTCGAGGACTTTGGTT GCTGCACGGGAAGGAAGAAGTAGGCTAGTCACTGAGATTCGCAATGTGTTAGATCTTATG CGCAGGAATGAAGGGCTAAATGTTGAGGATGTTATGATCCTTGATCACTCGGTGTTCTTT GGGATGCCGGATATTCAAGATCGCCATAGAGATATGCGTCTTGATGTTGATAATATGTCA TACGAGGAGTTATTGGCACTCGGAGAGCGCATTGGGGATGTTTGCACCGGGCTAAGTGAA GAAACTATTTCAAGTCGTTTGAAGCAGCGCAACTTTATTAGCATTAAAACAGAACAACCC GAGGAAGCAGAACCATGCTGCATATGCCGGGAGGAATATAGCAACGGGGATGGTCTCGGA ACACTGGAGTGTGGACATGATTTCCATACAGACTGCATTAAACAATGGCTCATGCAGAAG AATTTATGCCCGGTATGCAAGACGACGGGGCTTACTACATGA

Peptide Sequence

PEP ID	Solyc12g088740.2.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT5G42940.2)
Sequence	MQGQQNTVGSLQETLGFNHGSTPSEGGVDQQICWSNLQNSAQNHLPDYMVSSNATDIPFF NPMSQERQNVTRGSLGESSSSIAPNSASWSEQKADHGWSSAMTTYNGPSLICNEQQCGSS NIMSLNDFFSQGSSSSTIPHEINGNPAFEGRSDNNDDGCQVMECTPYNSVRPGKERMSSA CTYLGNGCSTDDSGDGRPESSSDSRRFCKRKTLEGYLAQSSGSGSSDYIPLAENSIWHSG TASHSMSTGANISAPTESVRSINMSEHVIPRLGLTMGGAVAVTPVGTPASRSAESSHRNF RVRIDGSPQQDYLPSNIFPDVDNVGNVNRSSEQQLPELLPNIPLDLRSVPAADSGNTQRQ PVVMHASSLHRRAQTRWSSASSSRTGSSSSSARERNSVTFEEPNSRIVSRNISQHPMFIP STNGRNLNQNPASLNLAGRNVSVAGNVASSSGVQSSSPTRVLHRSPQYHRRLSELVRRSL LSPASAGSGGVNGNSRPLRLSSPISQEMELPGNHEHRTSSALERHRDDAVGLSNSSRTLV AAREGRSRLVTEIRNVLDLMRRNEGLNVEDVMILDHSVFFGMPDIQDRHRDMRLDVDNMS YEELLALGERIGDVCTGLSEETISSRLKQRNFISIKTEQPEEAEPCCICREEYSNGDGLG TLECGHDFHTDCIKQWLMQKNLCPVCKTTGLTT*

Transcript Sequence

Transcript ID	Solyc12g088740.2.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT5G42940.2)
Sequence	ACATAAAATAAATTCAAGATTGCTTGCTGTTTCCTCAATTTTGTCTGACATTTTTTTTTG ATGTTTCAGGTTGGTTTACATAGATTTGATGTTTCTTCTGGTTGCTGTTTCACTGGTTTG CTAAGGAAAAAGTGTGAATCTTCTCACACTACAATACTATCTCAAATCCTCTTTGAGACT GTAAGCTTGGTATACCATAGCTCTAATGCAGGGGCAACAGAATACCGTTGGTTCGCTCCA AGAAACTTTAGGTTTTAATCATGGTTCGACGCCTAGTGAAGGTGGTGTAGATCAACAGAT ATGTTGGAGTAATTTGCAAAATTCTGCACAGAATCACCTGCCTGATTATATGGTTTCTTC AAATGCGACTGATATTCCATTCTTCAATCCTATGAGCCAAGAGAGACAGAATGTAACCAG GGGGAGTTTAGGAGAATCCAGCTCCTCTATTGCACCGAATTCTGCAAGTTGGAGTGAACA GAAAGCAGATCATGGATGGTCATCCGCAATGACTACATATAATGGACCTTCACTAATCTG TAATGAACAGCAATGTGGGTCTTCTAACATTATGTCATTGAATGATTTTTTTTCTCAAGG TTCTAGTTCTAGCACCATTCCTCATGAAATCAACGGGAATCCGGCATTTGAGGGGCGCAG TGACAATAATGACGATGGCTGTCAAGTGATGGAGTGTACTCCATACAATTCTGTTAGACC AGGAAAAGAGCGAATGTCATCTGCTTGTACTTATTTAGGTAATGGGTGTTCGACGGATGA TAGTGGTGATGGCAGGCCAGAAAGTTCATCAGATTCTAGGCGCTTTTGTAAGAGAAAAAC ACTTGAAGGATATCTAGCACAATCTTCAGGAAGTGGAAGTTCTGATTATATTCCTCTTGC TGAAAATAGCATATGGCATTCTGGAACTGCATCACATAGTATGAGTACAGGTGCAAATAT CTCTGCTCCAACTGAAAGTGTCAGAAGCATCAATATGTCTGAGCATGTGATTCCAAGACT TGGGCTTACCATGGGAGGAGCCGTTGCGGTAACTCCCGTTGGTACTCCGGCTTCAAGAAG TGCAGAAAGTTCTCATAGAAATTTCAGGGTGAGGATTGATGGCTCACCTCAGCAAGATTA TCTTCCCAGTAATATCTTTCCTGATGTGGATAATGTTGGAAATGTTAATCGGTCATCTGA ACAGCAATTACCAGAGTTACTTCCTAATATCCCTTTGGATTTGAGGTCTGTGCCTGCTGC AGACAGTGGAAATACTCAAAGGCAGCCTGTTGTAATGCATGCTTCGTCTCTGCATCGACG TGCACAGACTAGGTGGAGTTCAGCATCAAGTTCCAGAACTGGCAGCTCATCAAGTTCTGC GCGAGAGAGAAATTCAGTAACATTTGAAGAGCCTAACTCAAGAATTGTGTCAAGAAACAT CTCACAACATCCTATGTTCATACCTTCAACTAATGGGAGAAACTTGAACCAAAATCCTGC CAGCTTGAATTTAGCTGGAAGAAATGTTTCTGTTGCTGGAAATGTCGCATCCAGTTCAGG GGTCCAGTCATCTTCTCCTACTAGGGTTCTCCACAGATCTCCTCAATATCACCGGAGGCT GTCAGAATTAGTCCGTAGATCGTTGTTATCTCCAGCTAGCGCTGGATCTGGAGGTGTTAA TGGTAATAGTCGTCCACTACGTTTGAGTTCTCCTATCTCACAGGAGATGGAACTTCCTGG AAACCATGAGCATCGCACATCAAGTGCACTGGAGCGACATCGTGATGATGCTGTAGGACT CTCCAACTCGTCGAGGACTTTGGTTGCTGCACGGGAAGGAAGAAGTAGGCTAGTCACTGA GATTCGCAATGTGTTAGATCTTATGCGCAGGAATGAAGGGCTAAATGTTGAGGATGTTAT GATCCTTGATCACTCGGTGTTCTTTGGGATGCCGGATATTCAAGATCGCCATAGAGATAT GCGTCTTGATGTTGATAATATGTCATACGAGGAGTTATTGGCACTCGGAGAGCGCATTGG GGATGTTTGCACCGGGCTAAGTGAAGAAACTATTTCAAGTCGTTTGAAGCAGCGCAACTT TATTAGCATTAAAACAGAACAACCCGAGGAAGCAGAACCATGCTGCATATGCCGGGAGGA ATATAGCAACGGGGATGGTCTCGGAACACTGGAGTGTGGACATGATTTCCATACAGACTG CATTAAACAATGGCTCATGCAGAAGAATTTATGCCCGGTATGCAAGACGACGGGGCTTAC TACATGAGAAAGAACCATATTCTTTGAAAAAATATATGAATTGGAAGGGGAGTTTGTTCT AGAGATGAAATTAGCTCTAGCTACATTAGACATTTATTTAGAACAGAATTTAATTTACAT TATGGTTCTCTGGCTTTCACAATTATTTGAATCAACTTTTGGAATATTTATTTGGTTCAT TGTCATTGCTTTACTTTTTTTTTTGAACAAAATGCTTGGTTATCCCTATGCATGCCTTTA AAGTTTTGACAGGTTTGAGTATTCTTATAGCTGTTTCCAGCTAGTTTCGGATTGAGACGT AGTTATTACTCTCATTTGTTTCGATGAATAAGTTATCTCAGGTATCGGGATTATAATCCT TCGACTAACTTATCCTACCTCACTTGATAGGTGAGATAAAATAACATCAAGTTTGATGCA ATATATGAGATATTGAGGATT