Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g088450.2.1
CDS Infomation

C5orf35 (AHRD V3.3 *** AT5G23200.1)
Sequence

ATGGCTTCCCTTTTTCAGAAATTTCAAGAGGCGGTTAAAGTTCTTGCTAAAAGTCCCACA
TTTGCTAAAGATCCAAGGAGTCTACAGTTTGAAGCTGATGTAAACCGCCTCTTCCTGTAT
ACTAGTTACAATCGTTTGGGGAAGGATGCCGTTGAAACTGATGCAGAGGAGATCATTGAC
ATGGCTGGCAAGGCCTCCCTAGCTGATCAACAGAAGCAGGTCCAAGAAAATGTGCATTCC
CAAATTACAAGCTTTTGCAAATATATGGATCATATATTACAACCTGATCTTACGGTCAAG
GACAAGCCGGAAACACCATCTTCCGAAAATAATTCTTCTCCTCGTCGCAGTGGGCTCAGT
TTTGCAATTGGTAGGACTGCTCCATTAAAGGACCACAGCGCTATACCTGAAAGCAAGCCA
TTGAAGCGCACAGAGGTTTCACAGAGTTTAAAGGATCTTATGGGCTATACTCTCGAGGTC
AAACCTTCTCAAATTCCACATGAGGATGCTGGGCAAGGTTTATTCATACGTGGTGAAGCT
GATGTTGGTACTGTGTTAGCAGTATATCCTGGTGTAATCTACTCCCCTGCATACTACCGC
TATATTCCTGGATATCCAAGAGTTGACGCCCAAAATTCATATTTGATCACACGGTATGAT
GGAACTGTGATAAATGCACAGCCCTGGGGTGCTGGTGGTGAATCTCGGGAAATATGGGAT
GGGTCGTCTCTTCCTGAGCCTAAGCACATCATGCAAGCTGATGGAAAGGGTTCTGAGCGA
ATATGGAAAATGCTCAGTAAGCCATTGGATGGAACACGTCTAGGAGGTAACCATGAAGTG
CTGGAAAGGAGAAACCCTTTAGCCTTTGCTCACTTTGCCAACCACCCAGCAAGGGACATG
GTACCAAATGTAATGGTATGCCCTTATGATTTTCCTCTTCCAGAGAAGCACATGAGAGCC
TATATACCCAATATTTCATTTGGAAATGGTGAAGAAGCTAACATGAGGAGGTTTGGCACC
TTTTGGTTCAAATCTTGGAAATCTGGCAAGAACGGATTAGATGTCCCTGTTCTAAAGACG
CTCGTTCTTGTGGCAACTCGAGCAATTAGTAATGAAGAAATTCTCCTGAACTACAGATTG
AGCAACTCAAAGCTTAGACCATCATGGTACACTCCAGTGGATGAGGAAGAAGATCGACGG
AGGTGGAGCTAA

Peptide Sequence

PEP ID

Solyc12g088450.2.1
PEP Infomation

C5orf35 (AHRD V3.3 *** AT5G23200.1)
Sequence

MASLFQKFQEAVKVLAKSPTFAKDPRSLQFEADVNRLFLYTSYNRLGKDAVETDAEEIID
MAGKASLADQQKQVQENVHSQITSFCKYMDHILQPDLTVKDKPETPSSENNSSPRRSGLS
FAIGRTAPLKDHSAIPESKPLKRTEVSQSLKDLMGYTLEVKPSQIPHEDAGQGLFIRGEA
DVGTVLAVYPGVIYSPAYYRYIPGYPRVDAQNSYLITRYDGTVINAQPWGAGGESREIWD
GSSLPEPKHIMQADGKGSERIWKMLSKPLDGTRLGGNHEVLERRNPLAFAHFANHPARDM
VPNVMVCPYDFPLPEKHMRAYIPNISFGNGEEANMRRFGTFWFKSWKSGKNGLDVPVLKT
LVLVATRAISNEEILLNYRLSNSKLRPSWYTPVDEEEDRRRWS*

Transcript Sequence

Transcript ID

Solyc12g088450.2.1
Transcript Infomation

C5orf35 (AHRD V3.3 *** AT5G23200.1)
Sequence

TCCGTATGTTGGTAAACAAATTTAACATTTTAAATAAAATTGTCTGCAAAATCAAAAAGC
ATTTACAAAATCTCTTTTCTTAAAAGGTATTCTTATGGTTAATCAAATCACTAGATTTTA
GAGTTTTTGGATAAATATATTATTAATAATTCAATAATTCAAATTGACCTCTTTTATTTC
AATATATTACACAAACCTCCCTACATTTCTTCCATCAGATCAAATACGGCGCCGCAAATT
TCAGTTCAAAGGTTTGCAAGGTCAGCAAGCAGCTCACCAGTTCTTTCATGGCTTCCCTTT
TTCAGAAATTTCAAGAGGCGGTTAAAGTTCTTGCTAAAAGTCCCACATTTGCTAAAGATC
CAAGGAGTCTACAGTTTGAAGCTGATGTAAACCGCCTCTTCCTGTATACTAGTTACAATC
GTTTGGGGAAGGATGCCGTTGAAACTGATGCAGAGGAGATCATTGACATGGCTGGCAAGG
CCTCCCTAGCTGATCAACAGAAGCAGGTCCAAGAAAATGTGCATTCCCAAATTACAAGCT
TTTGCAAATATATGGATCATATATTACAACCTGATCTTACGGTCAAGGACAAGCCGGAAA
CACCATCTTCCGAAAATAATTCTTCTCCTCGTCGCAGTGGGCTCAGTTTTGCAATTGGTA
GGACTGCTCCATTAAAGGACCACAGCGCTATACCTGAAAGCAAGCCATTGAAGCGCACAG
AGGTTTCACAGAGTTTAAAGGATCTTATGGGCTATACTCTCGAGGTCAAACCTTCTCAAA
TTCCACATGAGGATGCTGGGCAAGGTTTATTCATACGTGGTGAAGCTGATGTTGGTACTG
TGTTAGCAGTATATCCTGGTGTAATCTACTCCCCTGCATACTACCGCTATATTCCTGGAT
ATCCAAGAGTTGACGCCCAAAATTCATATTTGATCACACGGTATGATGGAACTGTGATAA
ATGCACAGCCCTGGGGTGCTGGTGGTGAATCTCGGGAAATATGGGATGGGTCGTCTCTTC
CTGAGCCTAAGCACATCATGCAAGCTGATGGAAAGGGTTCTGAGCGAATATGGAAAATGC
TCAGTAAGCCATTGGATGGAACACGTCTAGGAGGTAACCATGAAGTGCTGGAAAGGAGAA
ACCCTTTAGCCTTTGCTCACTTTGCCAACCACCCAGCAAGGGACATGGTACCAAATGTAA
TGGTATGCCCTTATGATTTTCCTCTTCCAGAGAAGCACATGAGAGCCTATATACCCAATA
TTTCATTTGGAAATGGTGAAGAAGCTAACATGAGGAGGTTTGGCACCTTTTGGTTCAAAT
CTTGGAAATCTGGCAAGAACGGATTAGATGTCCCTGTTCTAAAGACGCTCGTTCTTGTGG
CAACTCGAGCAATTAGTAATGAAGAAATTCTCCTGAACTACAGATTGAGCAACTCAAAGC
TTAGACCATCATGGTACACTCCAGTGGATGAGGAAGAAGATCGACGGAGGTGGAGCTAAG
ATGATAATCAATGGTGCATGTTGAAGTGTACTAACCATGAAAACAAGTGCGTTTCAGTAT
ACGACGCCAGGAGAACAGTGAGAACATTTATTTTGGTGACTATAATCTGGTCTACTTTTG
GTTTTACATCGTTTTGAATAGTTTGCTTGTAGCAATTATGGCTAGTGGCCAAGCTAACAT
GTTAAGAACATGATTTGCTGAGCTGGACAACAGAGCTACTATGCTTTGAACTAACCGCGA
ATTAATCTTACATGAGTTACATAATAAGCGGAAAAGGAATCCATCCTTGTTATAGAAAAT
ATTAAATGTTATTCTGTTTGCTTATGAAATATGAGAACCTTCATTTT