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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g088070.2.1
CDS Infomation

TRAF-type zinc finger domain-containing 1 (AHRD V3.3 *** A0A0B0MEE8_GOSAR)
Sequence

ATGTCGGTAGCTTCTGATCAAGCCACAAGTATCTGCAGTTACTGTGACAGAGTAATTCCT
TGTTCCAATCTCGATTTGCATGTTGCTCACTGCTCCCGGAAGCTTGAAAAATGTAAAATT
TGTGGGGATGTGGTTCCAAAAAAACATGCAGAAGAACATTTCTTGAGCACTCATGCTCCG
GTAGCCTGTTCTTTGTGTAGTGAGACAATGGAGCGTGAGGTATTAGGTGTTCACAAAGGT
GAAAATTGTCCACAAAGAATTGTAACATGCGAGTATTGCGAGTTTCCTTTGCCTGCAATT
GATTTATTTAAGCATCAGGAAGTATGTGGGAATAGAACAGAACTCTGTCATATGTGTAGC
AGATATATTAGGCTCCATGAAAGAGATGTCCATGAGAGTAGATGCAATGGAGGCACAAAT
GTCATTGCAGAATCTTCCAGCAACACTAGTCTAGCTGAGAGAGATCGTCACGGTGCTCCT
AGAAGGCAACCACACGAAGCTTCCAGGAAGCGGCTTCTATTCACAATTGCTATAACAGGC
GTTGCTGTTTTGTTTGGCTCACTTCTTTACCAGAAAAAAACAGAAGACAGTCAAATGCCT
TAG

Peptide Sequence

PEP ID

Solyc12g088070.2.1
PEP Infomation

TRAF-type zinc finger domain-containing 1 (AHRD V3.3 *** A0A0B0MEE8_GOSAR)
Sequence

MSVASDQATSICSYCDRVIPCSNLDLHVAHCSRKLEKCKICGDVVPKKHAEEHFLSTHAP
VACSLCSETMEREVLGVHKGENCPQRIVTCEYCEFPLPAIDLFKHQEVCGNRTELCHMCS
RYIRLHERDVHESRCNGGTNVIAESSSNTSLAERDRHGAPRRQPHEASRKRLLFTIAITG
VAVLFGSLLYQKKTEDSQMP*

Transcript Sequence

Transcript ID

Solyc12g088070.2.1
Transcript Infomation

TRAF-type zinc finger domain-containing 1 (AHRD V3.3 *** A0A0B0MEE8_GOSAR)
Sequence

TTATATATCAATGTGAATACAATTGTATCAAAGACCATTATATTCCATTCTTTGATGCAA
ATAATCCAACTTTAAGCCCAAGAAGCCCATACCCGTAAGTGAACCAAATTCTAATACTTC
CTCCGTTCACCGATCATTCATTCATAATTGCAATTCAGAGAATATTAGAGTTTCATTTTG
CAGGAGGATAATGTCGGTAGCTTCTGATCAAGCCACAAGTATCTGCAGTTACTGTGACAG
AGTAATTCCTTGTTCCAATCTCGATTTGCATGTTGCTCACTGCTCCCGGAAGCTTGAAAA
ATGTAAAATTTGTGGGGATGTGGTTCCAAAAAAACATGCAGAAGAACATTTCTTGAGCAC
TCATGCTCCGGTAGCCTGTTCTTTGTGTAGTGAGACAATGGAGCGTGAGGTATTAGGTGT
TCACAAAGGTGAAAATTGTCCACAAAGAATTGTAACATGCGAGTATTGCGAGTTTCCTTT
GCCTGCAATTGATTTATTTAAGCATCAGGAAGTATGTGGGAATAGAACAGAACTCTGTCA
TATGTGTAGCAGATATATTAGGCTCCATGAAAGAGATGTCCATGAGAGTAGATGCAATGG
AGGCACAAATGTCATTGCAGAATCTTCCAGCAACACTAGTCTAGCTGAGAGAGATCGTCA
CGGTGCTCCTAGAAGGCAACCACACGAAGCTTCCAGGAAGCGGCTTCTATTCACAATTGC
TATAACAGGCGTTGCTGTTTTGTTTGGCTCACTTCTTTACCAGAAAAAAACAGAAGACAG
TCAAATGCCTTAGCATCTTTACTGTGATCCATCAACTGATATTATGATCCATCAACTGAT
ATTATGTTTTAATTAGGAGTTCCAAGATTTCATAATGTAACTACAAAGAACTAACATGCA
ATCAAAGATATGAACAATTACTGTTTTATGTAAATCAATTTAAGTTTCTAGTTGATCAAA
ATAATGTAATTTGTCTTCTTGAAAATAATGCCATTCATGATGCCTATGACAATAATATGG
ACTTTGTTTTTATTTTAGTGGGAAACAAAAACACAAAAGCATATTATATACAATTATAGG
GTAAACGTAAATTTAT