Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g068070.2.1
CDS Infomation	Filament-like plant protein (AHRD V3.3 *** G7J2M7_MEDTR)
Sequence	ATGGACCGGCGGAGTTGGTTGTGGCGGAGGAAATCGAGTCCGAGTGGTGAAACTGAAAGC TCTGGCGGATCCATTTCATCCCATTTCTCAGATGATCAGGAACCTCTGAATCACAACATT CAGTCACCTGAAGTCACATCTAAAACAGCTCCCACCATTGAAGAACTTAATGAAACTGTT AAGACTCTATCAGCTAAATTATCAGAAGCTCTTGAGACTATCCGCGAGAAGGAAGACTTG GTAAAGCAACATGCAAAAGTAGCAGAGGAAGCTGTCTCAGGATGGGAGACGGCTGAAGCA GAAGTATTGATCCAGAAAAGACTAGTTGAGACAGCAAACCAAAAGAACTCAATCCTTGAA GAGCGTATCAGTCATCTAGATGGAGCACTTAAAGAGTGTCTGAGACAGCTCCGACAGTCG AGAGAAGAGCAAGAGCAGAATGTCCAGGTCACTGTTGCCAAGACAAGTTCTGAATGGGAG TCTAGAAAGTCTGAACTTGAAAATAAGCTTGTTCAGCTCCAGGCTGAACTGCAAAATTCT AAATCCAAAGACAGCAACGTCAAAGATCTTCAGTGTAAGCTTGAATATGTGGAGAAACAG AACTCAAAACTCAAGATTGAGCTTGCTTCGATATCTGAGGAGCTCAAATTAATGACATCT GAGAGAGACTTAAGCACACATGCTGCTGAAACGGCCAGCAAACAACAGCTCGAGAGTATC AAGAAGGTTGCTAACCTTGAAGCAGAATGCCGTATGCTTAAGGCATTCGTTCGGAAAAAA TCAACAGTTAACCACCACAAGTCTAGCGCTTGTTCCTCTGCTTATGTTGAACCTTCCACT CACAGTTTATCAAATACTGGAGAACAGTTGTCAATAGTCGAAAATGATCGTCGCAACACG AGTGGTTTGGAGCCAAATAATAATTACCAGAACAGTTCTAGCTTCTTGTCTTCTGCTTTA GTTTCTGAATTGAGTCAATATAATCATGGAAAGCCACATAAAAGAGACCTTATATCGTCG TCTCTAGAGATAAATCTGATGGATGATTTTCTTGAGATGGAGAAGCTTGCAGCACGTCCT GACATCGTGTATGAAAGAAGCAATGGCAGAGGAGAACCCACTTTAAGAACTGAACTTGGA GCCGCGATTAGGCAGGCAGCTGAAGTGGAGAAGTTGGCAAAGATGGAGGTGGAGAAATTG AAACTAGAGATGGAATTAACTCAGTGTCAGGGAGAGCTTACGATATGTAAAGAACAATTA GAAGAAACTATGAACAATTTAATTGAAGTAAGAACTCAGTTATCTATGGAAAATGATGCC AGGAGAAAACTGGAGGCTGAATTCAAGGCTACTATAACCAAGCTTAAAGACTTAACAGAA CATGCACAGAAAATGGAGGCTGAGATTATCGAGCTCGAAACAAAGTTATCTATGGCCAAT GTAGAAAAGAGTAAGACCGAGGCAGAAGTCAAGTCTACCAATACTATGCTTAAGAATTTA GTTGAACGCTTAGAAGAAACACAGATTGATGTTGTGGAGCTCCAAGGTCAGCTCATTACT GCTAATGAAGCAAAAAGAGCTGCTGAGGCTGAAGTTCAGGCTATGAATGTGAAGCTTAAG AAATTAGAATTTTGCTTGGATGAAACTGAAGTGAAGTGTTTAGGGATTCAAACCCAACTT GAAATGGTGGAAGGAATGAAATCTGGCGTTGAGGCTGAGCTTGAAGCTATCAATGCAAAG AAATATGTGTCAGAGTCACAACTTAAAGCGACTGAATTGGAGCTTCAAACATTGCTTTCT AAAGTTGATTTTCTTCAAGAGGAGCTTTCCGAGGAAAGGGATTTGCACCAAAAAACTGCT GCAAAGTTACAGAAACTAGAAATTGATAATTCAGTGATAAAATCTGCATCCCAGCTTCAG AAAGGAACTATATTCGGGGAATTTACAATCAATAAGGATAAAGAAATGGCAATAGCAGCT AGTCGATTTGCAGAGTGCCAAAAAACAATTGCTTCCATTAATTGGCAATTGAAGTCCCTT GCTATCATGGATGATTTGTTGATCGAGTAG

Peptide Sequence

PEP ID	Solyc12g068070.2.1
PEP Infomation	Filament-like plant protein (AHRD V3.3 *** G7J2M7_MEDTR)
Sequence	MDRRSWLWRRKSSPSGETESSGGSISSHFSDDQEPLNHNIQSPEVTSKTAPTIEELNETV KTLSAKLSEALETIREKEDLVKQHAKVAEEAVSGWETAEAEVLIQKRLVETANQKNSILE ERISHLDGALKECLRQLRQSREEQEQNVQVTVAKTSSEWESRKSELENKLVQLQAELQNS KSKDSNVKDLQCKLEYVEKQNSKLKIELASISEELKLMTSERDLSTHAAETASKQQLESI KKVANLEAECRMLKAFVRKKSTVNHHKSSACSSAYVEPSTHSLSNTGEQLSIVENDRRNT SGLEPNNNYQNSSSFLSSALVSELSQYNHGKPHKRDLISSSLEINLMDDFLEMEKLAARP DIVYERSNGRGEPTLRTELGAAIRQAAEVEKLAKMEVEKLKLEMELTQCQGELTICKEQL EETMNNLIEVRTQLSMENDARRKLEAEFKATITKLKDLTEHAQKMEAEIIELETKLSMAN VEKSKTEAEVKSTNTMLKNLVERLEETQIDVVELQGQLITANEAKRAAEAEVQAMNVKLK KLEFCLDETEVKCLGIQTQLEMVEGMKSGVEAELEAINAKKYVSESQLKATELELQTLLS KVDFLQEELSEERDLHQKTAAKLQKLEIDNSVIKSASQLQKGTIFGEFTINKDKEMAIAA SRFAECQKTIASINWQLKSLAIMDDLLIE*

Transcript Sequence

Transcript ID	Solyc12g068070.2.1
Transcript Infomation	Filament-like plant protein (AHRD V3.3 *** G7J2M7_MEDTR)
Sequence	TATTTTTTCTTCACAGATAAATTAAATCATTTCTTTGGGATAATTGTTTAGTACTGTGTT TCCTTTTTCAGTATTCGATGAAGATTCTATTATGCTAATTTTTGTGTGGATAGGTTTACT TTGCATGGATGATGTATACATAAAATTTATTTTTCTGTTGGATTGGGGGAGGGGTATCCT CTTTCTGGTGGGTCATAATATTTTTCAGTTTTTGTGTGGGTTTATCCTCAAATTGGGTTT GAGTGTAATGATTGTTTATGGGGAATGGATCTTAGTTTATAATTTGAAATTGAAATACCT CCAATTTGAAATAGTGTTAGGTAGTGACTGTGAGATGTGAATTGTAATCAAAGGCAGCCC CCGTTTTTCAATTGTTTAGGTATAGGGCAAACCTTTGCTATTTTGCTTATTTATTTCTTT GTTGAGCAAAACAAACAAACAAAAAATGAGGAGGTAGAGTTTGGATGGACCGGCGGAGTT GGTTGTGGCGGAGGAAATCGAGTCCGAGTGGTGAAACTGAAAGCTCTGGCGGATCCATTT CATCCCATTTCTCAGATGATCAGGAACCTCTGAATCACAACATTCAGTCACCTGAAGTCA CATCTAAAACAGCTCCCACCATTGAAGAACTTAATGAAACTGTTAAGACTCTATCAGCTA AATTATCAGAAGCTCTTGAGACTATCCGCGAGAAGGAAGACTTGGTAAAGCAACATGCAA AAGTAGCAGAGGAAGCTGTCTCAGGATGGGAGACGGCTGAAGCAGAAGTATTGATCCAGA AAAGACTAGTTGAGACAGCAAACCAAAAGAACTCAATCCTTGAAGAGCGTATCAGTCATC TAGATGGAGCACTTAAAGAGTGTCTGAGACAGCTCCGACAGTCGAGAGAAGAGCAAGAGC AGAATGTCCAGGTCACTGTTGCCAAGACAAGTTCTGAATGGGAGTCTAGAAAGTCTGAAC TTGAAAATAAGCTTGTTCAGCTCCAGGCTGAACTGCAAAATTCTAAATCCAAAGACAGCA ACGTCAAAGATCTTCAGTGTAAGCTTGAATATGTGGAGAAACAGAACTCAAAACTCAAGA TTGAGCTTGCTTCGATATCTGAGGAGCTCAAATTAATGACATCTGAGAGAGACTTAAGCA CACATGCTGCTGAAACGGCCAGCAAACAACAGCTCGAGAGTATCAAGAAGGTTGCTAACC TTGAAGCAGAATGCCGTATGCTTAAGGCATTCGTTCGGAAAAAATCAACAGTTAACCACC ACAAGTCTAGCGCTTGTTCCTCTGCTTATGTTGAACCTTCCACTCACAGTTTATCAAATA CTGGAGAACAGTTGTCAATAGTCGAAAATGATCGTCGCAACACGAGTGGTTTGGAGCCAA ATAATAATTACCAGAACAGTTCTAGCTTCTTGTCTTCTGCTTTAGTTTCTGAATTGAGTC AATATAATCATGGAAAGCCACATAAAAGAGACCTTATATCGTCGTCTCTAGAGATAAATC TGATGGATGATTTTCTTGAGATGGAGAAGCTTGCAGCACGTCCTGACATCGTGTATGAAA GAAGCAATGGCAGAGGAGAACCCACTTTAAGAACTGAACTTGGAGCCGCGATTAGGCAGG CAGCTGAAGTGGAGAAGTTGGCAAAGATGGAGGTGGAGAAATTGAAACTAGAGATGGAAT TAACTCAGTGTCAGGGAGAGCTTACGATATGTAAAGAACAATTAGAAGAAACTATGAACA ATTTAATTGAAGTAAGAACTCAGTTATCTATGGAAAATGATGCCAGGAGAAAACTGGAGG CTGAATTCAAGGCTACTATAACCAAGCTTAAAGACTTAACAGAACATGCACAGAAAATGG AGGCTGAGATTATCGAGCTCGAAACAAAGTTATCTATGGCCAATGTAGAAAAGAGTAAGA CCGAGGCAGAAGTCAAGTCTACCAATACTATGCTTAAGAATTTAGTTGAACGCTTAGAAG AAACACAGATTGATGTTGTGGAGCTCCAAGGTCAGCTCATTACTGCTAATGAAGCAAAAA GAGCTGCTGAGGCTGAAGTTCAGGCTATGAATGTGAAGCTTAAGAAATTAGAATTTTGCT TGGATGAAACTGAAGTGAAGTGTTTAGGGATTCAAACCCAACTTGAAATGGTGGAAGGAA TGAAATCTGGCGTTGAGGCTGAGCTTGAAGCTATCAATGCAAAGAAATATGTGTCAGAGT CACAACTTAAAGCGACTGAATTGGAGCTTCAAACATTGCTTTCTAAAGTTGATTTTCTTC AAGAGGAGCTTTCCGAGGAAAGGGATTTGCACCAAAAAACTGCTGCAAAGTTACAGAAAC TAGAAATTGATAATTCAGTGATAAAATCTGCATCCCAGCTTCAGAAAGGAACTATATTCG GGGAATTTACAATCAATAAGGATAAAGAAATGGCAATAGCAGCTAGTCGATTTGCAGAGT GCCAAAAAACAATTGCTTCCATTAATTGGCAATTGAAGTCCCTTGCTATCATGGATGATT TGTTGATCGAGTAGATGAGCTATTACAGATATAATGACATGACATCCTCTTCAGAACTTG CTCTTTTCTGAAGGGAGGATGATTGTCAAAGATAGGGTATTATGCTGTTGAATTTAAGAT GGAAGAATTGAATAGCAGAAGAAGAAGTTGCAAAGCTGGAATAGCAAAATCTTTGGTGCC ATGTGGTAAGTGCTTAGACATGAACTTATTAGGTAGAACAAAAAATATATATATAGTCAT GTGCTGTACTAGTGAGTGTTATGTGCATATTTGAAGTACAAAGGTTCCAAATTCATTGTA CACAAGTTCACGAGAAAAAGTATGTGGCTATGTATCATAAAATTAAAATGACTCAAGTCA TCCACAGTCATTCAAATTTATCCGCAT