Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g056790.2.1
CDS Infomation

NAC Transcription Factor
Sequence

ATGAAGATGTTTGAGTTATCTGATTCGGATTCGTTTGCTGTTTTTGCATCATCAAAGAAT
GTTTTTCCACCGGGATTTAGGTTTCATCCGACTGATGAAGAACTTGTTCTGTACTATTTG
AAGAAGAAGATCTGCGGGAAGAGGATTCTGCTTGATGCCATTGCTGAGACTGATGTTTAC
AAATGGGAACCGGAGGACTTGCCTGATCTATCTAAGTTAAAAACTGGGGACCGCCAGTGG
TTCTTCTTTAGCCCCAGAGATCGAAAGTATCCTAATGGAGCACGGGCAAACAGGGGAACA
AAGCGTGGGCACTGGAAAGTTACAGGAAAGGATCGAATCATTATGTGCAACTCTCGTGCT
GTTGGACTTAAGAAGACCCTAGTCTTTTATAAAGGCCGAGCACCGGTAGGTGAACGGACA
GACTGGGTGATGCATGAGTATACTATGGATGAAGAAGAGCTGAAAAAATGTCAAAACGCC
CAGGACTACTATGCGCTTTACAAGGTATTTAAGAAGAGTGGCTCCGGGCCTAAGAATGGT
GAGCAGTATGGTGCACCTTTTAGAGAAGAGGAGTGGGCTGATGATGAATGTCCTAGTGCC
AAAGGCTTTGTCCATCAGGATAATTCCACTAACCACGTTATTGAAGCTCCTTCTGTGGAT
GGTGGACTTGAGGAGTTGTTGAACCCCGTGCTTATGGAGCCACTTTCTGTAGATTATGAT
TATGCAGTGGAGCAGCTTGTACAGGAGGAAGATACTCGAAGTACCTTGCTATATCATTCC
GCAAAGGAAGTCAATTTTCCCCACCGCAGTGCGGTGATTGCCCCAGCAAAGGAAAGCTTT
GACTTGACACAGTCAGGCACATCACAGCGACAGTTGCATGAGGCACTAGAAGTCACATCT
GCTCCTGTTATTTATGAACAGCAGCCACATGTGGTGGAAGAGGATTTTCTGGAGATGGAT
GACCTTCTTGGCCCAGAGCCAAGCACTCAGAACTTTGATAACTTGGGGCCGTGTGTTCAA
AACTTTGATGAGGCAGGCCAAAGTGGTCAAAACTTTGATATGCCTGCTGGAAACTTCGAA
GATTTGCCATTCGATTATTTTGATGGGTTGGCAGAGTTTGACCTGTACCATGATGCATCC
TTGCTTGATGATGTAAGAACAACTGAAGTGGGGCAAAATACTGAACCACACATGAACAAC
TTAGTGAATGGTTCTGTTAACCCTGCTTCTACAACGTATATAAACACTTTCCAGCATGAA
ATGATGAACAACCAGCCAATGTATTTGAATAATTCCGAACAGATTAGCAATCAACTGTGG
GTACACGATCAAAGGTTCAATATCTCTTACCCCAGCGAGGCAAATCAGTTGGTTGCTCCT
CCAGCTACTTCAGGTGTTGTATATGATAGTATTTTGGCAAATCATCCTATGGACGCAAAT
CAAAATCAACTACCCAATCAAGATGAAGGTACACCATCATGGTTAACCTCTCAGTTGTGG
GCCTTCGTGGATTCTATACCTACTGCTCCTGCTATAGCTGCTGAAAGTCCTGTGGTTAAT
AGTGCCTTTAAGCGCATGTCTAGCTTTAGTAAGATGAGAATAAACGCCAGGAACATGAAT
GTTGCGGCAGCAGGTAACACAGCAACTTCAAGAAGTTCGCGCTACTCTAAGAATGGGCTT
TTTTATTTTTCTTTTGTTGGAATACTGTGTGCAATCTTATGTGTATTACTAGGAACATTT
GTCGACATCTTGAGGAGACCCATATCCTCTTAA

Peptide Sequence

PEP ID

Solyc12g056790.2.1
PEP Infomation

NAC Transcription Factor
Sequence

MKMFELSDSDSFAVFASSKNVFPPGFRFHPTDEELVLYYLKKKICGKRILLDAIAETDVY
KWEPEDLPDLSKLKTGDRQWFFFSPRDRKYPNGARANRGTKRGHWKVTGKDRIIMCNSRA
VGLKKTLVFYKGRAPVGERTDWVMHEYTMDEEELKKCQNAQDYYALYKVFKKSGSGPKNG
EQYGAPFREEEWADDECPSAKGFVHQDNSTNHVIEAPSVDGGLEELLNPVLMEPLSVDYD
YAVEQLVQEEDTRSTLLYHSAKEVNFPHRSAVIAPAKESFDLTQSGTSQRQLHEALEVTS
APVIYEQQPHVVEEDFLEMDDLLGPEPSTQNFDNLGPCVQNFDEAGQSGQNFDMPAGNFE
DLPFDYFDGLAEFDLYHDASLLDDVRTTEVGQNTEPHMNNLVNGSVNPASTTYINTFQHE
MMNNQPMYLNNSEQISNQLWVHDQRFNISYPSEANQLVAPPATSGVVYDSILANHPMDAN
QNQLPNQDEGTPSWLTSQLWAFVDSIPTAPAIAAESPVVNSAFKRMSSFSKMRINARNMN
VAAAGNTATSRSSRYSKNGLFYFSFVGILCAILCVLLGTFVDILRRPISS*

Transcript Sequence

Transcript ID

Solyc12g056790.2.1
Transcript Infomation

NAC Transcription Factor
Sequence

CGATACACCGAAAAATCGAAAGAAAACAAAAGCTTAATCCCCTAATCCAAAAAGGTCACT
GAGCTTCAGTCTCACCAAACACGTACCTCCCCTTAAATTCCAAGAACTTTCCCCTTTAAT
CCAATCATCCTGGCGGCTACTATATTTTTTCTCCTTTTTTGACTAAATTATTTGTCCCAA
TTCGATTCCTAATCCATTTTTTTCTCTCAAGATCATATTTTTTGGATACCCTTTTGCTTA
TTGAATCATTTTGTGGTTGAATTTTTTTTTATTAGTGAAGAGATGAAGATGTTTGAGTTA
TCTGATTCGGATTCGTTTGCTGTTTTTGCATCATCAAAGAATGTTTTTCCACCGGGATTT
AGGTTTCATCCGACTGATGAAGAACTTGTTCTGTACTATTTGAAGAAGAAGATCTGCGGG
AAGAGGATTCTGCTTGATGCCATTGCTGAGACTGATGTTTACAAATGGGAACCGGAGGAC
TTGCCTGATCTATCTAAGTTAAAAACTGGGGACCGCCAGTGGTTCTTCTTTAGCCCCAGA
GATCGAAAGTATCCTAATGGAGCACGGGCAAACAGGGGAACAAAGCGTGGGCACTGGAAA
GTTACAGGAAAGGATCGAATCATTATGTGCAACTCTCGTGCTGTTGGACTTAAGAAGACC
CTAGTCTTTTATAAAGGCCGAGCACCGGTAGGTGAACGGACAGACTGGGTGATGCATGAG
TATACTATGGATGAAGAAGAGCTGAAAAAATGTCAAAACGCCCAGGACTACTATGCGCTT
TACAAGGTATTTAAGAAGAGTGGCTCCGGGCCTAAGAATGGTGAGCAGTATGGTGCACCT
TTTAGAGAAGAGGAGTGGGCTGATGATGAATGTCCTAGTGCCAAAGGCTTTGTCCATCAG
GATAATTCCACTAACCACGTTATTGAAGCTCCTTCTGTGGATGGTGGACTTGAGGAGTTG
TTGAACCCCGTGCTTATGGAGCCACTTTCTGTAGATTATGATTATGCAGTGGAGCAGCTT
GTACAGGAGGAAGATACTCGAAGTACCTTGCTATATCATTCCGCAAAGGAAGTCAATTTT
CCCCACCGCAGTGCGGTGATTGCCCCAGCAAAGGAAAGCTTTGACTTGACACAGTCAGGC
ACATCACAGCGACAGTTGCATGAGGCACTAGAAGTCACATCTGCTCCTGTTATTTATGAA
CAGCAGCCACATGTGGTGGAAGAGGATTTTCTGGAGATGGATGACCTTCTTGGCCCAGAG
CCAAGCACTCAGAACTTTGATAACTTGGGGCCGTGTGTTCAAAACTTTGATGAGGCAGGC
CAAAGTGGTCAAAACTTTGATATGCCTGCTGGAAACTTCGAAGATTTGCCATTCGATTAT
TTTGATGGGTTGGCAGAGTTTGACCTGTACCATGATGCATCCTTGCTTGATGATGTAAGA
ACAACTGAAGTGGGGCAAAATACTGAACCACACATGAACAACTTAGTGAATGGTTCTGTT
AACCCTGCTTCTACAACGTATATAAACACTTTCCAGCATGAAATGATGAACAACCAGCCA
ATGTATTTGAATAATTCCGAACAGATTAGCAATCAACTGTGGGTACACGATCAAAGGTTC
AATATCTCTTACCCCAGCGAGGCAAATCAGTTGGTTGCTCCTCCAGCTACTTCAGGTGTT
GTATATGATAGTATTTTGGCAAATCATCCTATGGACGCAAATCAAAATCAACTACCCAAT
CAAGATGAAGGTACACCATCATGGTTAACCTCTCAGTTGTGGGCCTTCGTGGATTCTATA
CCTACTGCTCCTGCTATAGCTGCTGAAAGTCCTGTGGTTAATAGTGCCTTTAAGCGCATG
TCTAGCTTTAGTAAGATGAGAATAAACGCCAGGAACATGAATGTTGCGGCAGCAGGTAAC
ACAGCAACTTCAAGAAGTTCGCGCTACTCTAAGAATGGGCTTTTTTATTTTTCTTTTGTT
GGAATACTGTGTGCAATCTTATGTGTATTACTAGGAACATTTGTCGACATCTTGAGGAGA
CCCATATCCTCTTAAATATGCAAAGAAAAGTTGATGTTCTATCATTTGGCATCTTGCCAG
AATCAATGAGAAGCAGAGCATACATTCTATGAGTAAAACAAAATCTACTTATAAGTATGA
TGTCTGAACTCCCCTTTCCCCTTGGTGGTCGTTTGGTTGCTGGTTAGAGTTATGCATGTA
TTAGTTATGCGTAAAAGAAAAACATACAAAATCTACTTATAAGTATGATGTCTGAACTCC
CCCTTCCCTTGGTGGTCGTTTGGTTGCTGGTTAGAGTTATGCACGTATTAGTTATGCGTA
AAAGAAAAACATGAACCAAGCATTGTATTAGCAATGCTACGTTTTACGTGAAAAGAGAAA
AAAACAACCAAACTTTGTATACTTTATGCTAGATTCTACATGAGTATTATATTTCCTCAT
TTTGTAATCAACCAACTTACAAAGTTATGCTAGTTTTTAGTACATGAATAACTCCTCTTT
TATCTAGCAACCAAACAACCTCTGTACCACCCTAAAGTAGTAACAAAAAGGATAAAATAA
CATAGGAAATATCCCTCTAGTGAACAGAAGAACAAGGAACTATGTCATTGGCAATTTTGA
CTGAAAGTTTTGAGATCATTTCATAATCAGTTTTTCTTTGCTTTTAGAGTTATGATTTGC
AGGTATGCATAATTGGCTTAATTTAGGTGAGTTTTCAAGTTTGATTTCTGATTTGGAAGG
TTCAATGTGGCTTGAAATTTGATGTTGTGTCTAGTTTTCTTGTTTATAGGTTGGACAGGT
TAACCTATTTGAACAGGTAAGTTCAGATTGGTACTTTGTTTTCGTTACTCGAGAGGAAAT
CGATTTCTAACTTGTCTTTTGATTATGCAGCATGATTTATCATCAGCTGTATAATGAAGT
TACTACCTGCTATTCTTACTTTGTAAAATTGCTTGGTATGAATTGTTTGTCCTTCAGCTC
ACAAGTTTTTACAAATTATGTTCAATTTGAGCATGGTCTTTGTCATACCCTAAACTGGAC
CAAGTGACTATTCTTAATCTAGCTGAAGTGGTAAGTACACTGTCATTCTTAACCAGAGTT
TCAGGTTTGAGCCCGTGGTATGATGTTAGGGAATACTTGTGGGACTGGTAGCAAACATCA
GGTGCGAAATAAAAAATAAAGTAAATTTAGTGATTCTAACAAATACACAAGGTAGACATG
AAATTTCCCTCGTATTATTACCGTATTTTCGACTACACACTTATGAGACTCCCGAGGCTG
CCACTTGTTGTTCACCTGTTCCTCTCTCTCTACTTGTAGTTCTCTGATATGATTTTGAAT
ATAAATCAATTAGATCTTCTGTTTGACGCTCTGCCATGAAAAATAGCACTTAGTTTTACA
AGTAATAGCCTTGCAAATCTACACCCTTCTGAATATATGGAGCATAGTCCTATTATACAA
CCTAGTGTTTCCACTTCTTTATTTTCCTTTTTCATTTTTTCAATACCCTATTATATGTAG
TCCTTTTTTTTTTGGGTAAAACGTGATTTTTCTAATTATTTTCAAGAATATGTTGAAGCA
AGAAAACAATATTTTAAAAAAATATTTTTTGGGAACACTTGGGACTAGAATGTGCTAATG
ACTTATGTCAATGGTATATGTGTGGGCGCTTCATTTCTAAGCCACGTTTTCATTTTCTTG
ACACTTGGGGGTT