Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g056650.2.1
CDS Infomation	GIGANTEA (AHRD V3.3 *** F2Z6M2_IPONI)
Sequence	ATGGCTTCTTCAAGCGAAAGGTGGATTGATAGTCTTCATTTCTCTTCATTATTTTGGGTT CCTCCACAAGCTGCAGAGCAGCGGAAGGATCAAATTACCGCTTATGTTAAATACTTTGGT CAGTTCACATCAGAACAATTTCCTGAAGATATAGCTGAGCTCATAAGGAACCGGTATCCA TCGAAGGAGAACAGACTTTTTGATGATGTTTTAGCAACTTTTGTTCTTCATCACCCAGAG CATGGGCATGCTGTAGTTCATCCAATTATTTCATGCATCATTGATGGAACACTGGAGTAT GATAAAAGTAGTCCACCTTTTGCTTCTTTTATATCACTGGTTTGCTCAAGCAGTGAGAAG GAATATTCTGAACAATGGGCTCTTGCATGTGGAGAGATTTTACGTATCCTAACACACTAC AACCGCCCGATTTTCAAAGTTGATCGTCAGGACAAAGGAACAGATAGAAGCACCAGTGGA AGCCACACTTCGACAAGTGAATCTTCCTCTAGTGAACCTGGTGTGCCCTCTATACAACAT GAGAGAAAACTGCTGAGACCATTGTCTCCGTGGATCACTGATATATTGCTTGCTGCACCA CTAGGGATTAGAAGCGATTACTTCCGCTGGTGTGGCGGTGTTATGGGAAAGTATGCTGCT GGAGATCTCAAGCCCCCATCAAGTGCTGCTTCTCATGGGTCTGGGAAGCATCCACAACTA CTGCCTGCAACTCCAAGGTGGGCTGTTGCTAATGGTGCTGGCGTTATTTTAAGTGTTTGT GATGAGGAAGTTTCTCGCTACGAGACTGCTACCTTGACTGCAGCCGCTGTTCCTGCACTT CTGCTTCCACCTCCAACAACGCCTATGGATGAGCACCTCGTTGCAGGACTACCACCACTT GAGCCATATGCACGTTTATTTCATCGATATTATGCAATCGCAACTCCAAGTGCCACACAG AGGCTTCTTGTTGGACTTTTAGAAGCTCCACCATCTTGGGCTCCAGATGCACTTGATGCT GCGGTACAACTAGTGGAACTTCTGCGAGCAGCTGAGGATTATGCATCTGGTCTGCGTCTT CCTAGGAATTGGATGCACTTGCATTTCTTGCGTGCAATTGGAATTGCCATGTCCATGAGA GCAGGAATTGCTGCAGATTCTGCAGCAGCTTTACTTTTCCGAGTACTTTCTCAACCTGCT TTGCTTTTCCCCCCCTTGAGGCAAATTGAAGAAATTGAAATTCTGGGTGGCGACACTTCA TGTAATAAAAAGCAGAGAGAAGTGACTGCTGCAGAAGCCACAGTAGAAGCCACTGCCCAA GGGATTGCATCAATGCTTTGTGCTCATGGTCCGGAGGTTGAATGGAGAATATGTACCATC TGGGAAGCTGCTTATGGATTGATTCCTTTAAGTTCATCTGCAGTTGATCTCCCTGAGATT GTAGTTGCCACCCCTTTACAACCACCCATTTTGTCATGGAACCTGTATATACCCCTTCTT AAGGTTCTTGAGTATCTTCCTCGTGGGAGCCCATCTGAAACTTGTCTTATGAAAATATTT GTTGCGACCGTCGAAGCAATTCTTCAGAGAACGTTCCCGCCTGATTCCTCTAGAGAAGAA ACCAGAAAAACCAGATATATTTTTGGCTCTGCCTTAAAAAATCTTGCTGTGGCAGAACTG CGAACCATGGTTCATTCATTGTTCTTGGAGTCGTGTGCCTCTGTTGAGCTTGCATCTCGA CTACTTTTTGTTATCTTAACAGTATGTGTCAGTCATGAAGCAAAACCAAATGGGAATAAA AGGCCTAAAGGTGAAGATACTCACTCACCTAGTGAAATCGGGGTAGACACTCAGGCAACC ATTGGAAAACAAAGACCAATAGGGAGTAAGAAAGTGAAAAAACAAGGGCCTGTTGCAGCA TTTGATTCTTATGTCCTTGCTTCTGTCTGTGGACTTTCTTGCGAGCTTCAGCTCTTCAGT ATGATTTCAAGAGGGCCTAATTATCCAGATCCAAAAATCATCATGGATGAAGCCAAGCCT GCAAGTGATTCATCTACTGAGCTACGAAATGGGATTCATTCTGCCGTCTCTCATACTCGG AGGATGTTGGAAATTTTAGAGGCACTTTTTTCTCTTAAACCATCTTCTGTTGGAACCTCA TGGAGCTTCAGCTCAAATGAGATAGTTGCTGCAGCTATGGTAGCTGCTCATATTTCTGAT CTTTTTAAACGCTCCAAGGCCTGCATGCACTCTCTTTCTTCTTTGATACGGTGCAAGTGG GATAATGAAATTCATTCCAGGGCATCGTCAATTTATAACCTAATTGATATTCATAGCAAA ACTGTTGCATCAATTGTCAACAAGGCTGAACCATTGGAAGCTTATCTAATACATGTACCA CTTCTGAAGGAGCGACCTAGATGCTTGAATGGGAAAAAGCATTATAAATACACAAGTCGT AATTGCTTAACATCAGAACAACCATCAGGACCTCTGTGTAAAGATTCGTATGATCGTAGA AGTTCACTTGTGTGTGAGAAAGCTTCAGACTCAAGTTCACACTCTAGTGAGCTTGCTGGG TACACCATCAGCAAAGTGTTTGCAAATTTCTCCTTGGATGCTACAGACTTGGCCAATTTT CTTACAAAGGACAGGCATTTTGGATTTAATTGCAATGCACAAGATCTTTTAAAATCAGTG CTTGCAGACAAACAAGAATTGTGTTTTTCTGTTGTCTCATTGCTCTGGCACAAGTTGATT GCATCACCTGAAACACAACCCATTGCAGAAAGCACTTCCGCCCAGCAAGGATGGAGACAG GTGGTTGATGCACTATGCAATGTTGTATCAGCGGCACCTGGAAAAGCTGCAACAGCAATT GTTCTTCAGGCTGAGAGGGAATTGCAACCATGGATTGCTAAAGATGATGAAGTTGGTCAG CAAATGTGGAGAATTAACCAACGTATAGTAAAATTGATCGCAGAACTGATAAGGAATCAT GATATAGCGGAATCTTTGGTAATTCTGGCTAGTAACCCTGACCTCCTTTTACGGGCCACA GATGGGATGCTTGTCGATGGAGAAGCATGCACCTTACCACAGCTAGAGCTTTTGGAAGTG ACAGCTAGAGCAATTCAACCAGTACTTGACTGGGGAGAATCTGGACAATCAGTTGCTGAT GGCCTCACAAACCTATTGAAGTGTCGTTTGCCTGCCACAGTTCGCTGTGTTTCTCATCCA AGTGCACATGTCCGTGCTCTCAGTACATCAGTTCTTCGTGACATTATGTATGCTGGTTCA GTAAAACCAAGTGCCAAACAAGCAGCAGATGTTAATGCCATCCATAATCCTGCTTATCAG TACCTTAGCATAAGCATCATTGACTGGAAAGCGGATATTGAGAAGTGTTTGATGTGTGAA GCTAGTAGCCGGCTTGAAAATGGAATGTCTGCTCAATTTCTTGATACTGCTGCTAGGGAA TTAGGCTGTACTATATCAGTCTGA

Peptide Sequence

PEP ID	Solyc12g056650.2.1
PEP Infomation	GIGANTEA (AHRD V3.3 *** F2Z6M2_IPONI)
Sequence	MASSSERWIDSLHFSSLFWVPPQAAEQRKDQITAYVKYFGQFTSEQFPEDIAELIRNRYP SKENRLFDDVLATFVLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFASFISLVCSSSEK EYSEQWALACGEILRILTHYNRPIFKVDRQDKGTDRSTSGSHTSTSESSSSEPGVPSIQH ERKLLRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGDLKPPSSAASHGSGKHPQL LPATPRWAVANGAGVILSVCDEEVSRYETATLTAAAVPALLLPPPTTPMDEHLVAGLPPL EPYARLFHRYYAIATPSATQRLLVGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGLRL PRNWMHLHFLRAIGIAMSMRAGIAADSAAALLFRVLSQPALLFPPLRQIEEIEILGGDTS CNKKQREVTAAEATVEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSAVDLPEI VVATPLQPPILSWNLYIPLLKVLEYLPRGSPSETCLMKIFVATVEAILQRTFPPDSSREE TRKTRYIFGSALKNLAVAELRTMVHSLFLESCASVELASRLLFVILTVCVSHEAKPNGNK RPKGEDTHSPSEIGVDTQATIGKQRPIGSKKVKKQGPVAAFDSYVLASVCGLSCELQLFS MISRGPNYPDPKIIMDEAKPASDSSTELRNGIHSAVSHTRRMLEILEALFSLKPSSVGTS WSFSSNEIVAAAMVAAHISDLFKRSKACMHSLSSLIRCKWDNEIHSRASSIYNLIDIHSK TVASIVNKAEPLEAYLIHVPLLKERPRCLNGKKHYKYTSRNCLTSEQPSGPLCKDSYDRR SSLVCEKASDSSSHSSELAGYTISKVFANFSLDATDLANFLTKDRHFGFNCNAQDLLKSV LADKQELCFSVVSLLWHKLIASPETQPIAESTSAQQGWRQVVDALCNVVSAAPGKAATAI VLQAERELQPWIAKDDEVGQQMWRINQRIVKLIAELIRNHDIAESLVILASNPDLLLRAT DGMLVDGEACTLPQLELLEVTARAIQPVLDWGESGQSVADGLTNLLKCRLPATVRCVSHP SAHVRALSTSVLRDIMYAGSVKPSAKQAADVNAIHNPAYQYLSISIIDWKADIEKCLMCE ASSRLENGMSAQFLDTAARELGCTISV*

Transcript Sequence

Transcript ID	Solyc12g056650.2.1
Transcript Infomation	GIGANTEA (AHRD V3.3 *** F2Z6M2_IPONI)
Sequence	CACGTATGCATTGAGAAAACAGAGTTAAAGATCTTCTTTCTGCTCCATATCTTTTTCTCT CTTCACAAAACTCTTCTTCTCCTCCTTGTATTTTTTTTTCTCTCCAAATCCCTAAAATAT CTTCACTTAAATCCTTCATTTTTTTCCAGATTTACCCTCAACAGTTTACTCAATTCACAT CTCCGGATAAAAGTGGTATTTTATTATTGTCTTCTTCACAGTAAAATAGTGAAATCTACA ACTGCCATAAGCTGGTTATAATATTAAAGGGACTAGCTTGAAGCTCTAAGGTGATTTTTC TTGATATATGGATCCTGTGGCGTTCTTTGATTGTCAAACAGTTGTATGGCTTCTTCAAGC GAAAGGTGGATTGATAGTCTTCATTTCTCTTCATTATTTTGGGTTCCTCCACAAGCTGCA GAGCAGCGGAAGGATCAAATTACCGCTTATGTTAAATACTTTGGTCAGTTCACATCAGAA CAATTTCCTGAAGATATAGCTGAGCTCATAAGGAACCGGTATCCATCGAAGGAGAACAGA CTTTTTGATGATGTTTTAGCAACTTTTGTTCTTCATCACCCAGAGCATGGGCATGCTGTA GTTCATCCAATTATTTCATGCATCATTGATGGAACACTGGAGTATGATAAAAGTAGTCCA CCTTTTGCTTCTTTTATATCACTGGTTTGCTCAAGCAGTGAGAAGGAATATTCTGAACAA TGGGCTCTTGCATGTGGAGAGATTTTACGTATCCTAACACACTACAACCGCCCGATTTTC AAAGTTGATCGTCAGGACAAAGGAACAGATAGAAGCACCAGTGGAAGCCACACTTCGACA AGTGAATCTTCCTCTAGTGAACCTGGTGTGCCCTCTATACAACATGAGAGAAAACTGCTG AGACCATTGTCTCCGTGGATCACTGATATATTGCTTGCTGCACCACTAGGGATTAGAAGC GATTACTTCCGCTGGTGTGGCGGTGTTATGGGAAAGTATGCTGCTGGAGATCTCAAGCCC CCATCAAGTGCTGCTTCTCATGGGTCTGGGAAGCATCCACAACTACTGCCTGCAACTCCA AGGTGGGCTGTTGCTAATGGTGCTGGCGTTATTTTAAGTGTTTGTGATGAGGAAGTTTCT CGCTACGAGACTGCTACCTTGACTGCAGCCGCTGTTCCTGCACTTCTGCTTCCACCTCCA ACAACGCCTATGGATGAGCACCTCGTTGCAGGACTACCACCACTTGAGCCATATGCACGT TTATTTCATCGATATTATGCAATCGCAACTCCAAGTGCCACACAGAGGCTTCTTGTTGGA CTTTTAGAAGCTCCACCATCTTGGGCTCCAGATGCACTTGATGCTGCGGTACAACTAGTG GAACTTCTGCGAGCAGCTGAGGATTATGCATCTGGTCTGCGTCTTCCTAGGAATTGGATG CACTTGCATTTCTTGCGTGCAATTGGAATTGCCATGTCCATGAGAGCAGGAATTGCTGCA GATTCTGCAGCAGCTTTACTTTTCCGAGTACTTTCTCAACCTGCTTTGCTTTTCCCCCCC TTGAGGCAAATTGAAGAAATTGAAATTCTGGGTGGCGACACTTCATGTAATAAAAAGCAG AGAGAAGTGACTGCTGCAGAAGCCACAGTAGAAGCCACTGCCCAAGGGATTGCATCAATG CTTTGTGCTCATGGTCCGGAGGTTGAATGGAGAATATGTACCATCTGGGAAGCTGCTTAT GGATTGATTCCTTTAAGTTCATCTGCAGTTGATCTCCCTGAGATTGTAGTTGCCACCCCT TTACAACCACCCATTTTGTCATGGAACCTGTATATACCCCTTCTTAAGGTTCTTGAGTAT CTTCCTCGTGGGAGCCCATCTGAAACTTGTCTTATGAAAATATTTGTTGCGACCGTCGAA GCAATTCTTCAGAGAACGTTCCCGCCTGATTCCTCTAGAGAAGAAACCAGAAAAACCAGA TATATTTTTGGCTCTGCCTTAAAAAATCTTGCTGTGGCAGAACTGCGAACCATGGTTCAT TCATTGTTCTTGGAGTCGTGTGCCTCTGTTGAGCTTGCATCTCGACTACTTTTTGTTATC TTAACAGTATGTGTCAGTCATGAAGCAAAACCAAATGGGAATAAAAGGCCTAAAGGTGAA GATACTCACTCACCTAGTGAAATCGGGGTAGACACTCAGGCAACCATTGGAAAACAAAGA CCAATAGGGAGTAAGAAAGTGAAAAAACAAGGGCCTGTTGCAGCATTTGATTCTTATGTC CTTGCTTCTGTCTGTGGACTTTCTTGCGAGCTTCAGCTCTTCAGTATGATTTCAAGAGGG CCTAATTATCCAGATCCAAAAATCATCATGGATGAAGCCAAGCCTGCAAGTGATTCATCT ACTGAGCTACGAAATGGGATTCATTCTGCCGTCTCTCATACTCGGAGGATGTTGGAAATT TTAGAGGCACTTTTTTCTCTTAAACCATCTTCTGTTGGAACCTCATGGAGCTTCAGCTCA AATGAGATAGTTGCTGCAGCTATGGTAGCTGCTCATATTTCTGATCTTTTTAAACGCTCC AAGGCCTGCATGCACTCTCTTTCTTCTTTGATACGGTGCAAGTGGGATAATGAAATTCAT TCCAGGGCATCGTCAATTTATAACCTAATTGATATTCATAGCAAAACTGTTGCATCAATT GTCAACAAGGCTGAACCATTGGAAGCTTATCTAATACATGTACCACTTCTGAAGGAGCGA CCTAGATGCTTGAATGGGAAAAAGCATTATAAATACACAAGTCGTAATTGCTTAACATCA GAACAACCATCAGGACCTCTGTGTAAAGATTCGTATGATCGTAGAAGTTCACTTGTGTGT GAGAAAGCTTCAGACTCAAGTTCACACTCTAGTGAGCTTGCTGGGTACACCATCAGCAAA GTGTTTGCAAATTTCTCCTTGGATGCTACAGACTTGGCCAATTTTCTTACAAAGGACAGG CATTTTGGATTTAATTGCAATGCACAAGATCTTTTAAAATCAGTGCTTGCAGACAAACAA GAATTGTGTTTTTCTGTTGTCTCATTGCTCTGGCACAAGTTGATTGCATCACCTGAAACA CAACCCATTGCAGAAAGCACTTCCGCCCAGCAAGGATGGAGACAGGTGGTTGATGCACTA TGCAATGTTGTATCAGCGGCACCTGGAAAAGCTGCAACAGCAATTGTTCTTCAGGCTGAG AGGGAATTGCAACCATGGATTGCTAAAGATGATGAAGTTGGTCAGCAAATGTGGAGAATT AACCAACGTATAGTAAAATTGATCGCAGAACTGATAAGGAATCATGATATAGCGGAATCT TTGGTAATTCTGGCTAGTAACCCTGACCTCCTTTTACGGGCCACAGATGGGATGCTTGTC GATGGAGAAGCATGCACCTTACCACAGCTAGAGCTTTTGGAAGTGACAGCTAGAGCAATT CAACCAGTACTTGACTGGGGAGAATCTGGACAATCAGTTGCTGATGGCCTCACAAACCTA TTGAAGTGTCGTTTGCCTGCCACAGTTCGCTGTGTTTCTCATCCAAGTGCACATGTCCGT GCTCTCAGTACATCAGTTCTTCGTGACATTATGTATGCTGGTTCAGTAAAACCAAGTGCC AAACAAGCAGCAGATGTTAATGCCATCCATAATCCTGCTTATCAGTACCTTAGCATAAGC ATCATTGACTGGAAAGCGGATATTGAGAAGTGTTTGATGTGTGAAGCTAGTAGCCGGCTT GAAAATGGAATGTCTGCTCAATTTCTTGATACTGCTGCTAGGGAATTAGGCTGTACTATA TCAGTCTGAAAACTCACTTTTCTGGGGCATATATTAGGTCTCTCTGTACCATACCATACC TATCTTGTAAAAGTCAGTTAGAAAATATATTTTAGAGTCCTGTGATTGTTGTACAATGGC ATGTAGATAGTTCCACTTGTTTTGTTTTTCATTTGGCACAGATTGTGTTTGTTGTACTTC CAAATACAAACATGATTTGTGGAAATAAGTAGATGTAGTTGTTTAATATTTTGAGTGACC CACTAAAGGCTGGTTCAGCTTTAGAATTGAATTTTTCCTATCATGTAATAACCTTCTTAC TTTGTATTGTACATTCAGCAGATAAAAAGTCATCTATTCAGTTTTGTTTTCCTCTCATTT CCTTGTTGAT