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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g056050.1.1
CDS Infomation

LOW QUALITY:Starch synthase 1, chloroplastic/amyloplastic (AHRD V3.3 --* SSY1_WHEAT)
Sequence

ATGGCAAAAGATCAAACTGGTTTTTCCAGTTTTCGATTTTGTTGCTGGTTTCTTGTTTTC
TTCTTTGCCTTGTCATCTATTCCTCTACTCTACTGGCCTTGTTTCTTTGGCTATGGCTAT
TCCTATATCCAAATGACAACGAGCAACAAAAATGGATCAACTAATCTACTGAGATTCTCG
AAAGCTTGGAATCATCTTGACTTTTCATCACAACCACCTCAAAGACTCCTTAAAATTGCT
CTGTTTGTCAAGAAATGGCCAGATGAAAATAAAGCTGGAGGACTTGAACGACACGCCTTA
ACACTCCATCTCGCCTTAGCTAAACGAGGCCACGAGCTTCATATCTTCACAGCTTCATCC
TCCAACTCATCATTCCCTTTATATCCACATTTTCACATCTCGAGGCCTACTGCTGCCGGA
TATCTTGACCAAGCCGTTGTTTGGAAGCAATTTCAAGCAGAAAACGCGACAAAAAGGCCC
TTCGATGTGATTCATACAGAGAGTGTAGGCCTTAGACATACTAGATCGAAAAACCTGAAA
AATCTTGCTGTTAGCTGGCACGGAATTGCCTATGAAACTATACATTCTGATATCATACAG
GAGCTTCTCCGAAATACTACTGATGATCCTGTAAAGTCACCTGCTTTGTCTGAAAGAATG
AAGAAGGTTATTGAAGAGGTAAAGTTTTTCCCAAATTACGCTCACCATGTTGCCACGAGT
GATCATGCTGGAGATGTACTTAAAAGGATCTATATGATCCCTGAAGAACGCGTTCATGTC
ATACTAAACGGTGTCAATGAGGAGATATTCAAGCCTGATGTTTCAAAGGGCAGTGCTTTC
AGATCCAACCTTGGAATCCCGGAATCAAAGTCCCTAATCGTGGGGTTAGCCGGGAGGTTA
GTTAAAGATAAAGGACACCCTTTAATGTTTGAAGCCTTACAACAAATTTTCAATGAGAAC
TCAACATTCAGGGACAATGTCATTGTTCTGGTTGCTGGAAATGGTCCATGGGGTACTCGA
TACAAAGGCCTCGGATCGAATAATGTGATGGTTTTAGGACCATTAGAACAGGATCAACTA
GCAGGATTCTACAATGCAATAGATGTATTCATAAACCCCACATTAAGAGCTCAAGGATTG
GATCACACACTATTAGAAGCCATACTAACAGGTAAGCCTTTGTTAGCAACGAAACTCGCC
AGCATTACTGGTTCGATCATCGTTAGCCAAGAAATCGGGTATACATATGCACCTACAGTA
AGGGAATTGAAGAAAGCTTTGTATAAGATTTTGGAGGATGGAAGGGAAAGTTTACAGAAG
AAAGGAAGATTTGCTAGAAAGAGGGGTTTGAAGTTGTTTACTGCTACCAAAATGGCTGCA
GCATATGAAAGACTGTTTCTTTGTATCTCAAGTGATGAAAAGCAAGCACATAACTATTGT
ATGTACCAACCTCAGTAA

Peptide Sequence

PEP ID

Solyc12g056050.1.1
PEP Infomation

LOW QUALITY:Starch synthase 1, chloroplastic/amyloplastic (AHRD V3.3 --* SSY1_WHEAT)
Sequence

MAKDQTGFSSFRFCCWFLVFFFALSSIPLLYWPCFFGYGYSYIQMTTSNKNGSTNLLRFS
KAWNHLDFSSQPPQRLLKIALFVKKWPDENKAGGLERHALTLHLALAKRGHELHIFTASS
SNSSFPLYPHFHISRPTAAGYLDQAVVWKQFQAENATKRPFDVIHTESVGLRHTRSKNLK
NLAVSWHGIAYETIHSDIIQELLRNTTDDPVKSPALSERMKKVIEEVKFFPNYAHHVATS
DHAGDVLKRIYMIPEERVHVILNGVNEEIFKPDVSKGSAFRSNLGIPESKSLIVGLAGRL
VKDKGHPLMFEALQQIFNENSTFRDNVIVLVAGNGPWGTRYKGLGSNNVMVLGPLEQDQL
AGFYNAIDVFINPTLRAQGLDHTLLEAILTGKPLLATKLASITGSIIVSQEIGYTYAPTV
RELKKALYKILEDGRESLQKKGRFARKRGLKLFTATKMAAAYERLFLCISSDEKQAHNYC
MYQPQ*

Transcript Sequence

Transcript ID

Solyc12g056050.1.1
Transcript Infomation

LOW QUALITY:Starch synthase 1, chloroplastic/amyloplastic (AHRD V3.3 --* SSY1_WHEAT)
Sequence

ATGGCAAAAGATCAAACTGGTTTTTCCAGTTTTCGATTTTGTTGCTGGTTTCTTGTTTTC
TTCTTTGCCTTGTCATCTATTCCTCTACTCTACTGGCCTTGTTTCTTTGGCTATGGCTAT
TCCTATATCCAAATGACAACGAGCAACAAAAATGGATCAACTAATCTACTGAGATTCTCG
AAAGCTTGGAATCATCTTGACTTTTCATCACAACCACCTCAAAGACTCCTTAAAATTGCT
CTGTTTGTCAAGAAATGGCCAGATGAAAATAAAGCTGGAGGACTTGAACGACACGCCTTA
ACACTCCATCTCGCCTTAGCTAAACGAGGCCACGAGCTTCATATCTTCACAGCTTCATCC
TCCAACTCATCATTCCCTTTATATCCACATTTTCACATCTCGAGGCCTACTGCTGCCGGA
TATCTTGACCAAGCCGTTGTTTGGAAGCAATTTCAAGCAGAAAACGCGACAAAAAGGCCC
TTCGATGTGATTCATACAGAGAGTGTAGGCCTTAGACATACTAGATCGAAAAACCTGAAA
AATCTTGCTGTTAGCTGGCACGGAATTGCCTATGAAACTATACATTCTGATATCATACAG
GAGCTTCTCCGAAATACTACTGATGATCCTGTAAAGTCACCTGCTTTGTCTGAAAGAATG
AAGAAGGTTATTGAAGAGGTAAAGTTTTTCCCAAATTACGCTCACCATGTTGCCACGAGT
GATCATGCTGGAGATGTACTTAAAAGGATCTATATGATCCCTGAAGAACGCGTTCATGTC
ATACTAAACGGTGTCAATGAGGAGATATTCAAGCCTGATGTTTCAAAGGGCAGTGCTTTC
AGATCCAACCTTGGAATCCCGGAATCAAAGTCCCTAATCGTGGGGTTAGCCGGGAGGTTA
GTTAAAGATAAAGGACACCCTTTAATGTTTGAAGCCTTACAACAAATTTTCAATGAGAAC
TCAACATTCAGGGACAATGTCATTGTTCTGGTTGCTGGAAATGGTCCATGGGGTACTCGA
TACAAAGGCCTCGGATCGAATAATGTGATGGTTTTAGGACCATTAGAACAGGATCAACTA
GCAGGATTCTACAATGCAATAGATGTATTCATAAACCCCACATTAAGAGCTCAAGGATTG
GATCACACACTATTAGAAGCCATACTAACAGGTAAGCCTTTGTTAGCAACGAAACTCGCC
AGCATTACTGGTTCGATCATCGTTAGCCAAGAAATCGGGTATACATATGCACCTACAGTA
AGGGAATTGAAGAAAGCTTTGTATAAGATTTTGGAGGATGGAAGGGAAAGTTTACAGAAG
AAAGGAAGATTTGCTAGAAAGAGGGGTTTGAAGTTGTTTACTGCTACCAAAATGGCTGCA
GCATATGAAAGACTGTTTCTTTGTATCTCAAGTGATGAAAAGCAAGCACATAACTATTGT
ATGTACCAACCTCAGTAA