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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g056030.2.1
CDS Infomation

ribosome biogenesis protein (AHRD V3.3 *** AT2G01640.2),Pfam:PF15341
Sequence

ATGGGGAAGACAACGTCACGTGGAGATGCTGCCGCTCGAGCTGAACATAAATTTGAGAAG
AAGCTGGACTTCTATGCTAAGGTTAGACAGACAGTTGCTTCGTTATCTACCAACAAGGCT
ATTGCTAAGAAGAAGAAAGTAAGAAGCAGGCAAAAGAAATTGAAGGCGTATGATCTTTCT
ACACTTACAGAGTTTCTCCCCGACTTGAAAGCCTCTCAGCAACCAAAACCTGCAGAGTTC
AAGTTGAAAAGTAAAACTAGGAAAAATTTAGTGTTGAAGGAAGACAATCAATTACAAGCA
GTTATTAATCATCCTGCTTTCCAGTCAGATCCATTAGGTGCCATTCATCAACATCTGCAA
AGCACACAACCTACTGTAGATGAAAAGCCAAAAATAAGAGAAAATAGAAATGGAAATAGG
AAAGGAAAAAAGAAATCTAAAGCCTCAGCCGGGCTACAGTCGATGGAGATCTAA

Peptide Sequence

PEP ID

Solyc12g056030.2.1
PEP Infomation

ribosome biogenesis protein (AHRD V3.3 *** AT2G01640.2),Pfam:PF15341
Sequence

MGKTTSRGDAAARAEHKFEKKLDFYAKVRQTVASLSTNKAIAKKKKVRSRQKKLKAYDLS
TLTEFLPDLKASQQPKPAEFKLKSKTRKNLVLKEDNQLQAVINHPAFQSDPLGAIHQHLQ
STQPTVDEKPKIRENRNGNRKGKKKSKASAGLQSMEI*

Transcript Sequence

Transcript ID

Solyc12g056030.2.1
Transcript Infomation

ribosome biogenesis protein (AHRD V3.3 *** AT2G01640.2),Pfam:PF15341
Sequence

TCCATTTTAATACTGATTTTTGTGATGCCTCCGGCTTTTTCCCTACATTTTTCTTTGTTA
TTAATGGATTCCTCCATACATGGTTTCTCCATTGCTCCTGTTTTGTGTTTCAATTTTGAC
TTCCGAATTGGTGTTCTGTTTTCTGTGCGTGTTCTCTATGTTTTGAGATGGATATTGAAT
GTTAATTTACAATGTTTGATACCTGAAAAATCTTATCCGTTACTGGGTAAAAACAGGGTT
AGTCTACTGAAATACAAATAGTTCCTCTTTATCAAACTCAACAAATTATCCATTAAGGGC
AAAACAACAAACCACTAAAGTAGAAATAAATTGAAAAGTTTAACAATTATGTTAAAAACG
ATTATAATCTCCACACGATTGAACTGAATCAGGGTCATGCTTAGATTAACAACAACAAAA
CAAGCTATTAGAAATAGATTTGATGTGTGTATAATGGTTGAAAGCAAAATCCTAGAACAA
GTAAAGTTTAAATCCTGTGCTTCGCCTAAGAAAAGGTAAAAAGAAACTAAATCCTCAATA
AGAACCAAAAAGGGTTGTTGATCAGATGCTAAAGTCACAAACTTTATCAAAATATAGACT
GTTTTAACATCAATATACATTGGTATGGTAATATTATATAAGGACTATTCTACCTTAAAA
AATCCAAGTCAATTTCCCAAATAATTCACCTTTATCAAACTCAACAAACTAAAAATATGA
CTTAGTGGTAAGTTGTCGTCAAAGTTTCAATCTGAAAATCGAGGATTTGAGTCATACTAA
GAGGTAAATTATGAACCACTGTTTCTGCATAAAGCCCACAACCAAAACAACTGAGAGGTA
GAGGTCTTAGTTTCTTTTAATTTCTGTAGAAGTGAGGCGGAGAGGTAAAAGGCTTTGATA
AAGTTCGAGTCAATGATTCGAGACTTTATCATAGACCTTAATTATGCTATTGTTATCACC
TAAAGACTAGAATGGTGTTGAAACTTGAACAGTTCACAAGGACATAAATTTCATTTGTAG
CAACACGTTCAGTAGTTTTTCAATATGATTATTATTAAAATCATAACCTTGTGGAATTCT
TATTAATAGGGCATAGGTCCAGTTCCAGGCCTAATACAACCAGTTACCCGGATACAAAAT
TAGGCCCGTCTTCATCAGTTAGAGTTCTTATTCCTTCCTGAGTTTTCCCTGTGTTTTTAC
AGCAAAGGCTGCTGCCCTTTAAAGCATGGGGAAGACAACGTCACGTGGAGATGCTGCCGC
TCGAGCTGAACATAAATTTGAGAAGAAGCTGGACTTCTATGCTAAGGTTAGACAGACAGT
TGCTTCGTTATCTACCAACAAGGCTATTGCTAAGAAGAAGAAAGTAAGAAGCAGGCAAAA
GAAATTGAAGGCGTATGATCTTTCTACACTTACAGAGTTTCTCCCCGACTTGAAAGCCTC
TCAGCAACCAAAACCTGCAGAGTTCAAGTTGAAAAGTAAAACTAGGAAAAATTTAGTGTT
GAAGGAAGACAATCAATTACAAGCAGTTATTAATCATCCTGCTTTCCAGTCAGATCCATT
AGGTGCCATTCATCAACATCTGCAAAGCACACAACCTACTGTAGATGAAAAGCCAAAAAT
AAGAGAAAATAGAAATGGAAATAGGAAAGGAAAAAAGAAATCTAAAGCCTCAGCCGGGCT
ACAGTCGATGGAGATCTAATGCGCTCTTAAGCTTTTTCTGCTTCTCCAGGTGAGGAATCC
CCCATTTTTTGGTATGTTGGTCTGTGTTCACAGCCGTATGTTATAAATAGGGCAACAGTA
AGGAGTTGGCAAATTGCTTCTGGGATCCTAATTAGAAAAGAGCATGTGAGATGGCTATAA
GTAGAAGATACAGATACCCCATTAGGGACTTGTGGTATTTTCTTTTCATCAACTATTTGT
AATAGCAACCTGGAAATTCTCTTTTTTTATTGTCCTCTTGCTCTTTGATTACTAAAAATG
ATCTGTTGATGAACAATTTGCTTGTAAGTTCCTTTTATTGATCAATACAAGGTTTAATTT
ATTACTGTTGGTGCTTTCATTGATCCTGCTCCTTGCCTCTCTACCCTTCTACCCTGCTCG
ATGATCAATTGAACACCCTCATTTACTCGTGAAGGTGTTGCAGGAGTCCGTGTAGGTGAT
GCAAGTGAGTCATTGGTCGAAGATTGGACCCTGAGTTGGGGTCAGGACGTTGGGTTGGTT
CGTGCTGGAGGCGGGGTGAGGGTTGTAAGA