Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g055750.2.1
CDS Infomation

vacuolar cation/proton exchanger (AHRD V3.3 *** AT1G55720.2)
Sequence

ATGGCATCGAACGCAGCAGCACCATTCTGGAGATCAGCAGGGATGACTTACATAACCTAT
TCAAATCTCTGTGCTAATCTTGTTAGGAATTGCCTGAAGGAACCTTACAAAGCTGAAGCC
CTTTCCCGTGAGAGGGTCCATTACTCCATCTCCAAATGGGCTGATGGCAAACCTCAGAAA
CCCAGGGATAAGTTAGACATTGAATCTGATGAGGAGATCTCCTTTAGTTCATCTCATGCG
ACAAACAAGATAGAGAGTTTGCATTTTGAGTCAGCTCATATGGCGTCGCCTAGAAGTTTT
TACTCCTCGAGAGTCTTGAGGAAGGAGTGGGTGTTCTTCTTCAGTTTGGTGGGCATTACA
CCCTTAGCTGAGCGTTTGGGTTATGCGACTGAGCAGCTTGCATTCTATACAGGGCCTACA
GTTGGGGGACTTCTAAATGCTACATTTGGCAATGCTACTGAAATGATAATCTCATTATAT
GCATTGAATAATGGGATGATGAGGGTTGTTAAACAATCCTTGCTGGGTTCCATTTTATCA
AATATGCTCTTGGTGCTTGGATGTGCCTTCTTCTGTGGTGGGATTGTTCATCAGCAGAAA
GTCCAGGCAACTGCCCTCGTGAACTCAGGATTGTTATTGATGGCAGTCATGGGCTTATTA
TTTCCCGCTGTACTTCATTTCACCCACACAGAAGTGCATTTTGGGAAGTCAGAGCTGGCT
CTTTCAAGATTTAGCAGTTGCATAATGCTGGTGGCATATGCAAGTTACCTATTTTTTCAG
CTCAAGAGTCAGCCAAATCTATATAGCTCAATCGATGAGGATAGAGAGAATAATGCTGAA
AATTCTGATGAAGAAGAGGCTCCTGAGATAACACAATGGGAAGCTATAGGGTGGCTTGCT
ATTTTGACAGTATGGATATCTGTACTATCTGGGTATCTTGTTGATGCCATAGAGGGAGCA
TCCGACTCAATGAACATGCCTGTGTCCTTTATTAGTGTCATCTTGCTTCCAATTGTAGGA
AATGCTGCAGAACATGCAAGTGCAATCATGTTTGCAATGAAAGATAAGCTTGACATTACA
CTTGGAGTTGCGATTGGGTCCTCTACTCAGATATCAATGTTTGTGATTCCATTTTGTGTT
GTTGTTGGTTGGTTCATGGGAAAACCAATGGACTTGAACTTCCAATTGTTTGAGACTGCT
ACACTCTTTATCACAGTGCTAGTTGTGGCATTTATGCTGCAGGAAGGAACATCAAATTAT
TTTAAGGGGTTGATGCTTATCCTATGCTATCTCATTGTTGCAGCAAGTTTCTTTGTACAT
GTTGATCCATCCAAAGGCTACAAATTGTTTTACACTGTTCCTATTGCTAGGAACAATAAA
CCAGCCAGTGAAGGTGATGAAGATGGGAGAAATCTTAACAAGGGGAATAAGTATGCTCAG
GGTGGTGATACTCATGCCTCGGCAGATGAACTCCTCAACAACTGGCAGTGA

Peptide Sequence

PEP ID

Solyc12g055750.2.1
PEP Infomation

vacuolar cation/proton exchanger (AHRD V3.3 *** AT1G55720.2)
Sequence

MASNAAAPFWRSAGMTYITYSNLCANLVRNCLKEPYKAEALSRERVHYSISKWADGKPQK
PRDKLDIESDEEISFSSSHATNKIESLHFESAHMASPRSFYSSRVLRKEWVFFFSLVGIT
PLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISLYALNNGMMRVVKQSLLGSILS
NMLLVLGCAFFCGGIVHQQKVQATALVNSGLLLMAVMGLLFPAVLHFTHTEVHFGKSELA
LSRFSSCIMLVAYASYLFFQLKSQPNLYSSIDEDRENNAENSDEEEAPEITQWEAIGWLA
ILTVWISVLSGYLVDAIEGASDSMNMPVSFISVILLPIVGNAAEHASAIMFAMKDKLDIT
LGVAIGSSTQISMFVIPFCVVVGWFMGKPMDLNFQLFETATLFITVLVVAFMLQEGTSNY
FKGLMLILCYLIVAASFFVHVDPSKGYKLFYTVPIARNNKPASEGDEDGRNLNKGNKYAQ
GGDTHASADELLNNWQ*

Transcript Sequence

Transcript ID

Solyc12g055750.2.1
Transcript Infomation

vacuolar cation/proton exchanger (AHRD V3.3 *** AT1G55720.2)
Sequence

ATGGCATCGAACGCAGCAGCACCATTCTGGAGATCAGCAGGGATGACTTACATAACCTAT
TCAAATCTCTGTGCTAATCTTGTTAGGAATTGCCTGAAGGAACCTTACAAAGCTGAAGCC
CTTTCCCGTGAGAGGGTCCATTACTCCATCTCCAAATGGGCTGATGGCAAACCTCAGAAA
CCCAGGGATAAGTTAGACATTGAATCTGATGAGGAGATCTCCTTTAGTTCATCTCATGCG
ACAAACAAGATAGAGAGTTTGCATTTTGAGTCAGCTCATATGGCGTCGCCTAGAAGTTTT
TACTCCTCGAGAGTCTTGAGGAAGGAGTGGGTGTTCTTCTTCAGTTTGGTGGGCATTACA
CCCTTAGCTGAGCGTTTGGGTTATGCGACTGAGCAGCTTGCATTCTATACAGGGCCTACA
GTTGGGGGACTTCTAAATGCTACATTTGGCAATGCTACTGAAATGATAATCTCATTATAT
GCATTGAATAATGGGATGATGAGGGTTGTTAAACAATCCTTGCTGGGTTCCATTTTATCA
AATATGCTCTTGGTGCTTGGATGTGCCTTCTTCTGTGGTGGGATTGTTCATCAGCAGAAA
GTCCAGGCAACTGCCCTCGTGAACTCAGGATTGTTATTGATGGCAGTCATGGGCTTATTA
TTTCCCGCTGTACTTCATTTCACCCACACAGAAGTGCATTTTGGGAAGTCAGAGCTGGCT
CTTTCAAGATTTAGCAGTTGCATAATGCTGGTGGCATATGCAAGTTACCTATTTTTTCAG
CTCAAGAGTCAGCCAAATCTATATAGCTCAATCGATGAGGATAGAGAGAATAATGCTGAA
AATTCTGATGAAGAAGAGGCTCCTGAGATAACACAATGGGAAGCTATAGGGTGGCTTGCT
ATTTTGACAGTATGGATATCTGTACTATCTGGGTATCTTGTTGATGCCATAGAGGGAGCA
TCCGACTCAATGAACATGCCTGTGTCCTTTATTAGTGTCATCTTGCTTCCAATTGTAGGA
AATGCTGCAGAACATGCAAGTGCAATCATGTTTGCAATGAAAGATAAGCTTGACATTACA
CTTGGAGTTGCGATTGGGTCCTCTACTCAGATATCAATGTTTGTGATTCCATTTTGTGTT
GTTGTTGGTTGGTTCATGGGAAAACCAATGGACTTGAACTTCCAATTGTTTGAGACTGCT
ACACTCTTTATCACAGTGCTAGTTGTGGCATTTATGCTGCAGGAAGGAACATCAAATTAT
TTTAAGGGGTTGATGCTTATCCTATGCTATCTCATTGTTGCAGCAAGTTTCTTTGTACAT
GTTGATCCATCCAAAGGCTACAAATTGTTTTACACTGTTCCTATTGCTAGGAACAATAAA
CCAGCCAGTGAAGGTGATGAAGATGGGAGAAATCTTAACAAGGGGAATAAGTATGCTCAG
GGTGGTGATACTCATGCCTCGGCAGATGAACTCCTCAACAACTGGCAGTGAATCAAAAGT
GACGAGCCTAACAAGCTGCACTCAGCCCAAGTGTTGGCTAACTCTAGAGTGAAGGGTGGT
GGTGAAGTGGTAGATGGGTTCTTCTCATCGGTGGAACACTCAACATTGGTTGGTGAACCA
TTGACTTCTTCTTCAACGTTTATCCTTGTTGTATAATTTTCTTTAGCAAACAAACAAATT
CAAATCCTTCCCCGCAGTATATTGAAGCTGATTTTATAGTCTTCCACTCGGAGTTAATTT
TTAGAAGGATGGAGACCATAATACTAGCTTCCTTACCATTCAAAATGTAACTATT