Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g055740.2.1
CDS Infomation

Serine/threonine-protein phosphatase (AHRD V3.3 *** G7L9Y4_MEDTR)
Sequence

ATGTTGAAGTTAGCTGTTTTCTTGAGCCTAATTTGGGCTTTGACTCTTCTCTATGGAGAG
ATGTTCTCATTTTGGGTCCCTTTTCTCTCATGTTCTTGGCCTCATCCTTCTACTTCTTCT
TCAATGACAGATGGAGTAGATCATCAACGTGATTACGTGAAAATTGCTGTTCTGACTGAT
CCTCAGCTCATGGATAGAACCTCTCTTCATCTTGCCCCAAAATCCTTTGCACTTGAAGTT
GCTCAGTTCTATACAGATTTGTATATGCGCAGGGCATTCCTATCATCTATTTTACCTTCC
AAACCAGATATAATTCTGTTCCTAGGTGATTATTTCGACGGTGGGCCTTTTCTCTCTGAT
GAAGAATGGCAGGAATCCTGGAGTCGGTTTAAGCATATATTTGACATTGACATGCTTGAA
CAAACTACGAACATAAAGCTGTACTACCTTGCTGGAAACCATGATATAGGGTATGCAGCT
TTTCACTCGCGTATGCCGGAGGTTATCAAACGCTACGAGAAAGCATTTGGTGAAAGGAAC
TATCAGTTTACAGCTGGGAAAGTAGATTTCATCACCATCGATGCGCAAACCTTAGATGGG
CATCCCCAGAACAATATAACCCCTGCCACATGGGAATTTGTCAAGAATGTCTCTAACCAT
CTGTCTTCGAATCCAAGGGTTCTATTGACTCATATTCCATTGTATCGACCAGATCAAACT
GCCTGCGGTTCATACCGCTCATCGTCAATTATTAATCAGAGAATCAACCGTGCTGCTCAG
GATAAGGAAATATTATATCAAAACTATATTACTGAAAAAGGAACGAATGACCTGCTTGAC
TCGATCAAACCTGCACTAATTCTCTCCGGGCATGACCATGATCAGTGTACAGTGATCCAC
AAATCCAAATATGGTTCCGTAGAAGAGCATACTCTAGGTACTATAAGCTGGCAGCAGGGA
AATTTGTTTCCATCTTACATGCTATTATCTGCAAGTAGCCTTATCTTACCGAATGGATCA
ATGTCAGCGGATGCAATTTCCACCAAAGTGTGCTTTCTCCCTGTGCAGTTATACATTTAT
ATATGGTATATTTTGCTGTTTGTCATAACCCTTCTTATTGCCGTCTTTTGGCCCACGAGT
GGGGTGCTCTTTCCAAACTATCTTGATGGATTTCTTAGGAATGTAAGAGGTCTAATTAGT
TCAAGCTTTTGGGGAGGTGGGAAAAAACTGAAAAGTGAAGATGAGATATATGAATATGAG
GAGATATGGGATGCAGAAGGATCGATGCACCTCATAAAGAAAACCTTTAAAGTGTCTTCT
ACATGCTCAAGCGACAGCGCTTCAGTAGAACGGGGTAATGCTATCATGCGGTCAGTTGCC
AGAAAACAAGAGACAGATACCTCAAATCCCGCTGATGTGACTTTACATATAGGATCAGAT
ACCGCGGTAAAAGCATTGCCTCGGACAAACAAATCAGCGACAAAGATGGTAATTAGGAGA
TTGGTGAGGACATTGTGTATAATTACTATCGTTGCAGCTTTTAACATCCCTCTATATATG
ATGCTTCTTTTCAAAGATTGGATTGATAAATGA

Peptide Sequence

PEP ID

Solyc12g055740.2.1
PEP Infomation

Serine/threonine-protein phosphatase (AHRD V3.3 *** G7L9Y4_MEDTR)
Sequence

MLKLAVFLSLIWALTLLYGEMFSFWVPFLSCSWPHPSTSSSMTDGVDHQRDYVKIAVLTD
PQLMDRTSLHLAPKSFALEVAQFYTDLYMRRAFLSSILPSKPDIILFLGDYFDGGPFLSD
EEWQESWSRFKHIFDIDMLEQTTNIKLYYLAGNHDIGYAAFHSRMPEVIKRYEKAFGERN
YQFTAGKVDFITIDAQTLDGHPQNNITPATWEFVKNVSNHLSSNPRVLLTHIPLYRPDQT
ACGSYRSSSIINQRINRAAQDKEILYQNYITEKGTNDLLDSIKPALILSGHDHDQCTVIH
KSKYGSVEEHTLGTISWQQGNLFPSYMLLSASSLILPNGSMSADAISTKVCFLPVQLYIY
IWYILLFVITLLIAVFWPTSGVLFPNYLDGFLRNVRGLISSSFWGGGKKLKSEDEIYEYE
EIWDAEGSMHLIKKTFKVSSTCSSDSASVERGNAIMRSVARKQETDTSNPADVTLHIGSD
TAVKALPRTNKSATKMVIRRLVRTLCIITIVAAFNIPLYMMLLFKDWIDK*

Transcript Sequence

Transcript ID

Solyc12g055740.2.1
Transcript Infomation

Serine/threonine-protein phosphatase (AHRD V3.3 *** G7L9Y4_MEDTR)
Sequence

AATCAACATTGATGTGAAAGAGATGCCAGCTACCTATAACTCTAAAAGAACTCATATCAA
GTGCTAATTAAACTATCTTAATCAGCTTTGTGAGCTTTGTTTTGGGATCTACAAGAAAAA
AAAATGGAAGTAGAGAAGGAGTAGTAATTGCTGAGTTAACAAAGATGTTGAAGTTAGCTG
TTTTCTTGAGCCTAATTTGGGCTTTGACTCTTCTCTATGGAGAGATGTTCTCATTTTGGG
TCCCTTTTCTCTCATGTTCTTGGCCTCATCCTTCTACTTCTTCTTCAATGACAGATGGAG
TAGATCATCAACGTGATTACGTGAAAATTGCTGTTCTGACTGATCCTCAGCTCATGGATA
GAACCTCTCTTCATCTTGCCCCAAAATCCTTTGCACTTGAAGTTGCTCAGTTCTATACAG
ATTTGTATATGCGCAGGGCATTCCTATCATCTATTTTACCTTCCAAACCAGATATAATTC
TGTTCCTAGGTGATTATTTCGACGGTGGGCCTTTTCTCTCTGATGAAGAATGGCAGGAAT
CCTGGAGTCGGTTTAAGCATATATTTGACATTGACATGCTTGAACAAACTACGAACATAA
AGCTGTACTACCTTGCTGGAAACCATGATATAGGGTATGCAGCTTTTCACTCGCGTATGC
CGGAGGTTATCAAACGCTACGAGAAAGCATTTGGTGAAAGGAACTATCAGTTTACAGCTG
GGAAAGTAGATTTCATCACCATCGATGCGCAAACCTTAGATGGGCATCCCCAGAACAATA
TAACCCCTGCCACATGGGAATTTGTCAAGAATGTCTCTAACCATCTGTCTTCGAATCCAA
GGGTTCTATTGACTCATATTCCATTGTATCGACCAGATCAAACTGCCTGCGGTTCATACC
GCTCATCGTCAATTATTAATCAGAGAATCAACCGTGCTGCTCAGGATAAGGAAATATTAT
ATCAAAACTATATTACTGAAAAAGGAACGAATGACCTGCTTGACTCGATCAAACCTGCAC
TAATTCTCTCCGGGCATGACCATGATCAGTGTACAGTGATCCACAAATCCAAATATGGTT
CCGTAGAAGAGCATACTCTAGGTACTATAAGCTGGCAGCAGGGAAATTTGTTTCCATCTT
ACATGCTATTATCTGCAAGTAGCCTTATCTTACCGAATGGATCAATGTCAGCGGATGCAA
TTTCCACCAAAGTGTGCTTTCTCCCTGTGCAGTTATACATTTATATATGGTATATTTTGC
TGTTTGTCATAACCCTTCTTATTGCCGTCTTTTGGCCCACGAGTGGGGTGCTCTTTCCAA
ACTATCTTGATGGATTTCTTAGGAATGTAAGAGGTCTAATTAGTTCAAGCTTTTGGGGAG
GTGGGAAAAAACTGAAAAGTGAAGATGAGATATATGAATATGAGGAGATATGGGATGCAG
AAGGATCGATGCACCTCATAAAGAAAACCTTTAAAGTGTCTTCTACATGCTCAAGCGACA
GCGCTTCAGTAGAACGGGGTAATGCTATCATGCGGTCAGTTGCCAGAAAACAAGAGACAG
ATACCTCAAATCCCGCTGATGTGACTTTACATATAGGATCAGATACCGCGGTAAAAGCAT
TGCCTCGGACAAACAAATCAGCGACAAAGATGGTAATTAGGAGATTGGTGAGGACATTGT
GTATAATTACTATCGTTGCAGCTTTTAACATCCCTCTATATATGATGCTTCTTTTCAAAG
ATTGGATTGATAAATGAACTCTACTACACAGATATGCCAGTGATGCTGGCTTAGATTAGG
TACTTCCCTATTAGGATACATAGAGACGAGATGTAAAAATGAGCAGGCGTTAGCATCTGT
GCCTTCTTTCACATGTTCGCTATATTCTGTTACTCTGTTGTTGTATTGACATATCCTAAG
TTAACAGAAGATTTGAGTTCCTTTCACTCAAACATAACTAGGTGCCACTTTTTCTTTTTT
GTTGTTCTATGAGAATTGGATTTTCTACACTAATATATGAGAATTTGATGCTTCTGTATA
CTTATATCAACTATCTTTATTCCTGTTCACATAGTATTTGTATATATTTGTGTGTGATAT
TTATATTAGTTCAAAGTTGTTACTAGTTGCTCATCAAATTTAACTAATGAATCACCAAAT
TATTCAGTATTAGTTTTAG