Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g055730.2.1
CDS Infomation

Lipase (AHRD V3.3 *** Q5S8F1_RICCO)
Sequence

ATGCAATTTATTAAATCAATCTACTATATATTCTACGTATATCTATACTTAGCTCAGGAG
AACATCAACATGGCTACAAGTAATATTGATTCCTTCTTGATTGTGAAACCGGAAAATGGA
GGAACATGGGACCTCGTAGGCCCCCTCCTCGGAGGCCTCGGAGAGATCAATGCTAAGTTT
CTCGAATATTCTTGTGCTGACGATGGTAATGGTGATTGTGATGGCGGAGAAGAGGTGGAT
GATCATAGATGGGTAATAGTTGTGTCCATCTTAGTGAGGAAAATATTGAAGGTGTTTAAG
AAACCAATGGAATGGAGTGGCTACTTCCTAGAGTTTTTCATCAACATCTTCTCTCTAAAT
GGAAACTTTCGGGGCTTATTCCACAATATATTGCATGGAAGGTTGGTGATTCCACAAAGA
GGAACTGCAAATTTCATAAGTATTATTGGCCATATAGATGGAAGAATTAAATTACCATAC
AACACTGAAATATTAACCAAGGAAAGTTCTCGTTTAATCGAAAAAAATGAGCAACTGGGA
ATGAGACATAGAGATCTTATGGATTTATGTATGATGTCTTCAAAGTTGGTTTATGAAAAC
GAAATTTTCGTTGAGGACGTTGTAAATCATCAATGGAAGATGCATTTTGTGGATTTTTAC
CACTGTTGGAATGATTACCAGAAACAGAATTCAACTGAAGTGTTCATACTATGCGATAAA
TCAAAAGATGCAAACTTGATTTTGATCAGCTTCAGAGGTACTGCGCCATTTTCTGCTGAT
GATTGGATCACTGATTTCGACTACTCGTGGTATGAGATTCCTAAAATAGGAAAACTACAT
ATGGGATTCTTAGAAGCGTTAGGATTAGGAAGCAGAGTAAACGTTTCCACGTTTCATGAA
CATCTTGTTGATAAAAATGTTGATGTAACTATCGCTCATCCAGAGAGGATCACTGCTTAC
TATACTGTTAGAAGCAAACTCAAAAGTTTACTAAAGGAGCATGAAAATGCAAGGTTTGTC
GTTACAGGACATAGCTTAGGAGGAGCGTTGGCTATACTATTTCCAACGATGCTAGTTGTA
CATGAGGAAATGGATGTAATGAAGAGACTATCGCGTGTATACACATATGGTCAACCTAGA
GTTGGAGATAGACAGTTAGGGAGGTTTATGGAAGAACATTTGGAACATCCGGTGCCTAAG
TACTTCAGAATTGTTTATAACAATGATATTGTTCCGAGGTTACCTTATGATGATAAAACG
TTTCTGTATAAGCATTTTGGTGTTTGTATGTACTATAACAGCTCATACGTTGAGGAAGAA
GTACACGAAGAGCCAAACATGAACTTTTTTGGGCTACGATACGTGTTACCAATGTATCTG
AATGCTGTTTGGGAGTTTATCAGAAGCTTGTTTATGTGTTACATATATGGACCTGAGTAC
AAAGAGAGCTGGGAATCAATAGTTTTTCGGATGGTGGGGATGTTTCTTCCGGGGATTTCT
GCTCATAGCCCGGTTAATTATGTTAACTCTGTAAGACTTGGAAAGAAGAAGTCTTCAGAT
GTTTCGGAAAGTGTAGATTGA

Peptide Sequence

PEP ID

Solyc12g055730.2.1
PEP Infomation

Lipase (AHRD V3.3 *** Q5S8F1_RICCO)
Sequence

MQFIKSIYYIFYVYLYLAQENINMATSNIDSFLIVKPENGGTWDLVGPLLGGLGEINAKF
LEYSCADDGNGDCDGGEEVDDHRWVIVVSILVRKILKVFKKPMEWSGYFLEFFINIFSLN
GNFRGLFHNILHGRLVIPQRGTANFISIIGHIDGRIKLPYNTEILTKESSRLIEKNEQLG
MRHRDLMDLCMMSSKLVYENEIFVEDVVNHQWKMHFVDFYHCWNDYQKQNSTEVFILCDK
SKDANLILISFRGTAPFSADDWITDFDYSWYEIPKIGKLHMGFLEALGLGSRVNVSTFHE
HLVDKNVDVTIAHPERITAYYTVRSKLKSLLKEHENARFVVTGHSLGGALAILFPTMLVV
HEEMDVMKRLSRVYTYGQPRVGDRQLGRFMEEHLEHPVPKYFRIVYNNDIVPRLPYDDKT
FLYKHFGVCMYYNSSYVEEEVHEEPNMNFFGLRYVLPMYLNAVWEFIRSLFMCYIYGPEY
KESWESIVFRMVGMFLPGISAHSPVNYVNSVRLGKKKSSDVSESVD*

Transcript Sequence

Transcript ID

Solyc12g055730.2.1
Transcript Infomation

Lipase (AHRD V3.3 *** Q5S8F1_RICCO)
Sequence

AAAAAATTACCAAGCAAATGCGTTGCCATAAGGCAGAGAGTCGATATTGACATTATCCAA
CAATCTTGCTCTCAACATCTATACCTTATGCAATATGCATGTTGCTCTTGGGAGTTTGAA
CTGATATTTTTTACTTTAATACCAATATTTAGGATTAAACGCTTACTATTACTCTCAAAA
GCTATATATGAGAAAGATCATGATTTTATTTCTTAATCAATCAATCAAGCAACTCATGTT
CAATCCATCTGACTTACCATCTCCTAGATGACCATAAATAAGATATTAACATTACCCAAT
ATCCTATTTTTTTTAAAAAAAAATTAACTAAACAAACGTGAAAAAATTACAAACATTTGG
TACGTGGGCATCCAAACACACCCATACCTCAAATTTCAATGAATTAGGACTTAACCAAAA
AAAATAAATAAAATCCATCATATTTCAATATTTACTAGTTTTTTAATAATCTCACGTTAA
CTTTTGTATTTATTATTGTCTTCACTTCACTAGTGAATACAATACTTTTACTACACGTTA
CTGCTGACTTGTCAATTTTCTCCAATTATTAATGCTATAAATTAAATTCACATTTTATCA
TTCTAACAACAAATGCAATTTATTAAATCAATCTACTATATATTCTACGTATATCTATAC
TTAGCTCAGGAGAACATCAACATGGCTACAAGTAATATTGATTCCTTCTTGATTGTGAAA
CCGGAAAATGGAGGAACATGGGACCTCGTAGGCCCCCTCCTCGGAGGCCTCGGAGAGATC
AATGCTAAGTTTCTCGAATATTCTTGTGCTGACGATGGTAATGGTGATTGTGATGGCGGA
GAAGAGGTGGATGATCATAGATGGGTAATAGTTGTGTCCATCTTAGTGAGGAAAATATTG
AAGGTGTTTAAGAAACCAATGGAATGGAGTGGCTACTTCCTAGAGTTTTTCATCAACATC
TTCTCTCTAAATGGAAACTTTCGGGGCTTATTCCACAATATATTGCATGGAAGGTTGGTG
ATTCCACAAAGAGGAACTGCAAATTTCATAAGTATTATTGGCCATATAGATGGAAGAATT
AAATTACCATACAACACTGAAATATTAACCAAGGAAAGTTCTCGTTTAATCGAAAAAAAT
GAGCAACTGGGAATGAGACATAGAGATCTTATGGATTTATGTATGATGTCTTCAAAGTTG
GTTTATGAAAACGAAATTTTCGTTGAGGACGTTGTAAATCATCAATGGAAGATGCATTTT
GTGGATTTTTACCACTGTTGGAATGATTACCAGAAACAGAATTCAACTGAAGTGTTCATA
CTATGCGATAAATCAAAAGATGCAAACTTGATTTTGATCAGCTTCAGAGGTACTGCGCCA
TTTTCTGCTGATGATTGGATCACTGATTTCGACTACTCGTGGTATGAGATTCCTAAAATA
GGAAAACTACATATGGGATTCTTAGAAGCGTTAGGATTAGGAAGCAGAGTAAACGTTTCC
ACGTTTCATGAACATCTTGTTGATAAAAATGTTGATGTAACTATCGCTCATCCAGAGAGG
ATCACTGCTTACTATACTGTTAGAAGCAAACTCAAAAGTTTACTAAAGGAGCATGAAAAT
GCAAGGTTTGTCGTTACAGGACATAGCTTAGGAGGAGCGTTGGCTATACTATTTCCAACG
ATGCTAGTTGTACATGAGGAAATGGATGTAATGAAGAGACTATCGCGTGTATACACATAT
GGTCAACCTAGAGTTGGAGATAGACAGTTAGGGAGGTTTATGGAAGAACATTTGGAACAT
CCGGTGCCTAAGTACTTCAGAATTGTTTATAACAATGATATTGTTCCGAGGTTACCTTAT
GATGATAAAACGTTTCTGTATAAGCATTTTGGTGTTTGTATGTACTATAACAGCTCATAC
GTTGAGGAAGAAGTACACGAAGAGCCAAACATGAACTTTTTTGGGCTACGATACGTGTTA
CCAATGTATCTGAATGCTGTTTGGGAGTTTATCAGAAGCTTGTTTATGTGTTACATATAT
GGACCTGAGTACAAAGAGAGCTGGGAATCAATAGTTTTTCGGATGGTGGGGATGTTTCTT
CCGGGGATTTCTGCTCATAGCCCGGTTAATTATGTTAACTCTGTAAGACTTGGAAAGAAG
AAGTCTTCAGATGTTTCGGAAAGTGTAGATTGAAATGAAATGCCTTGATCAAGTGATTTA
CGTCTCATAAATGAACTCGTTAGAGCTTTTTCGTGTCTTGAATAAAGTGAACTCGTTTGA
GGTTTTTCGTGTCTTGAATAAAGTTTAGTGTTGTGATTGCAAGAAGTGTTGGAACTATTA
TGAGTTGTTGATGTGAATGTATCAATGAGAGTTCATGTAGAAGTTTTTGTTGTTGTTGTT
GTTGAAGGAATGTAGATTGGTTTGTGTTGTGAACTTATTGAATAAATGTGGTTTGAGT