Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g049300.2.1
CDS Infomation

R2R3MYB transcription factor 54
Sequence

ATGGGTAGAAAGCCTTGTTGTTCTAAAGAAGGATTAAACAAAGGGGCATGGACTCCTTTG
GAGGATAAAATTTTAATGGATTATATCAAAGTTCATGGTGAAGGAAAATGGAGAAATCTT
CCCAAAGGAGCTGGTCTTAAAAGATGTGGAAAGAGTTGTAGACTGAGGTGGCTAAATTAT
CTAAGGCCAGATATCAAGAGGGGAAATATAAGTCCAGATGAAGAAGATCTCATAATTAGA
CTACATAAGCTTCTTGGAAACAGATGGTCTCTGATAGCTGGAAGGCTACCAGGACGAACA
GACAATGAAATCAAGAACTATTGGAATACCAACATTGGAAGAAGACTTCAAGAAGGAACA
CGCTCTGGTCAACCAAATCGTGTAATATCTTCAAATCGTCAACGTCATCGTTCTATTCAT
ACAAAATCAACCATACCAAATGATCAAGAACATGCAAGTCCTCAGGATTCACAATATTTG
CTGACGGACATTAGACACGGGGGATCATTGTCCTCCTCCTCCCCGTGTTTGGTTGTCCAC
ACAAAGGCAATCAGGTGCACTAAAGTTTTCATGAGTCCTACTACTAGTAATTCAGTAGTA
GACACACATGAGACTACTGAACATGATAACGATCACAAGGTAATGATAGAGGAAAACGTG
ACAACTAATATTTTAACACCTTCTTCATCATCATTCTCAATTTCATCATTGTCCGAGCAA
GAACCACAACAACAACAACAACAACCAGTATCTGAATCATATTCGCCAACAAATTTGTCT
TTTGAATTGGAGAACTATAACTTCAGTTTCATGTTTGGTTTCGATGTTGACGATCCTTTT
CTAGCTGAGCTTCTTAATGCACCTGATTTACGTGACCAAATTTTGGAAAATAGTACTACT
ACTAGTAGTACTATTGTTAATGGTGACATTAATAATTCCAACAAAAATGAAAGGCAAAGG
AGCTATTTTCCTTCAAGTTCTAGTCAAATTGCAATTTTCTCAGAAGAGACGCAACACAAC
GATTTGGAACTTTGGATTAACGGGTTCTCGTCTTGTTAA

Peptide Sequence

PEP ID

Solyc12g049300.2.1
PEP Infomation

R2R3MYB transcription factor 54
Sequence

MGRKPCCSKEGLNKGAWTPLEDKILMDYIKVHGEGKWRNLPKGAGLKRCGKSCRLRWLNY
LRPDIKRGNISPDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRRLQEGT
RSGQPNRVISSNRQRHRSIHTKSTIPNDQEHASPQDSQYLLTDIRHGGSLSSSSPCLVVH
TKAIRCTKVFMSPTTSNSVVDTHETTEHDNDHKVMIEENVTTNILTPSSSSFSISSLSEQ
EPQQQQQQPVSESYSPTNLSFELENYNFSFMFGFDVDDPFLAELLNAPDLRDQILENSTT
TSSTIVNGDINNSNKNERQRSYFPSSSSQIAIFSEETQHNDLELWINGFSSC*

Transcript Sequence

Transcript ID

Solyc12g049300.2.1
Transcript Infomation

R2R3MYB transcription factor 54
Sequence

GTCATTTTAGGGGTAGAGGTGAGTAAGGTTATTGGCTTGATTTTATTCATCGATTTTTAC
TGCTACTAGTGTTTCTTTTATTTTGGTTATCTTTACTTTTTTACTGTCAAGATTTTTTAT
TTTATCGATATTTACATCGTATAGCTTGTTACTCTTGCACATCTTTCAAACTTATTTTGA
AAACTAAAAATAAGTTTCTCAAGTCTAAGAATTTTTGGGAAACAACCTTATCTCACTTTT
TTCGTTTCTCCAGACCGTACTTGTGAAACTAGTGGTAAAATTAAGTTTTACCTTTCTTAC
AAAGAAGAAGGCAAAAGATGCAAGTAACTTTCATTAAAAAAGGGAATTATATGAGAGAAA
GACATGGTCCCACTTGTACAAGTAAACTGCAGAAATATTAGCAAACTTGTGTATATGTGT
TTTATCATTTAATATAAGATAATGATATTTTGGGAGACAACTTCTTCCAATTTTTACCTA
CCCCTCCCCCTAGCAAGGGGGTGGGGTGTGGATATTAAATTGTCATACTATAAGTATATG
CATATTGAAAACTTGACAATTGCCAAGCTCTAAAGATCACAAAATCATAAAAGATAACCA
TATAATATAATACATTATTTGTATAGAAATCATGGGTAGAAAGCCTTGTTGTTCTAAAGA
AGGATTAAACAAAGGGGCATGGACTCCTTTGGAGGATAAAATTTTAATGGATTATATCAA
AGTTCATGGTGAAGGAAAATGGAGAAATCTTCCCAAAGGAGCTGGTCTTAAAAGATGTGG
AAAGAGTTGTAGACTGAGGTGGCTAAATTATCTAAGGCCAGATATCAAGAGGGGAAATAT
AAGTCCAGATGAAGAAGATCTCATAATTAGACTACATAAGCTTCTTGGAAACAGATGGTC
TCTGATAGCTGGAAGGCTACCAGGACGAACAGACAATGAAATCAAGAACTATTGGAATAC
CAACATTGGAAGAAGACTTCAAGAAGGAACACGCTCTGGTCAACCAAATCGTGTAATATC
TTCAAATCGTCAACGTCATCGTTCTATTCATACAAAATCAACCATACCAAATGATCAAGA
ACATGCAAGTCCTCAGGATTCACAATATTTGCTGACGGACATTAGACACGGGGGATCATT
GTCCTCCTCCTCCCCGTGTTTGGTTGTCCACACAAAGGCAATCAGGTGCACTAAAGTTTT
CATGAGTCCTACTACTAGTAATTCAGTAGTAGACACACATGAGACTACTGAACATGATAA
CGATCACAAGGTAATGATAGAGGAAAACGTGACAACTAATATTTTAACACCTTCTTCATC
ATCATTCTCAATTTCATCATTGTCCGAGCAAGAACCACAACAACAACAACAACAACCAGT
ATCTGAATCATATTCGCCAACAAATTTGTCTTTTGAATTGGAGAACTATAACTTCAGTTT
CATGTTTGGTTTCGATGTTGACGATCCTTTTCTAGCTGAGCTTCTTAATGCACCTGATTT
ACGTGACCAAATTTTGGAAAATAGTACTACTACTAGTAGTACTATTGTTAATGGTGACAT
TAATAATTCCAACAAAAATGAAAGGCAAAGGAGCTATTTTCCTTCAAGTTCTAGTCAAAT
TGCAATTTTCTCAGAAGAGACGCAACACAACGATTTGGAACTTTGGATTAACGGGTTCTC
GTCTTGTTAATTATTTGAAATGTGTACGTGGTTGATGATATGACTCATAAATATGCACTC
ATAAAGTTGTTAGTAGTGTCAGATTCAGAATTTTGAATCAGTAAATCATGATGTTTATAT
GTAATTATTTTCATTTATTTTCACCTATCCCCTTAGTTGTATCATATGAACTAAATGCTT
TTAGTTGATTTGAATTAACGTATTTGTTGTTTCATATGTAATAAATGCTTTTAGTTGATT
TGAATTAATGTATTTGAATTTTGATGTATCGTACGTACTAATACTTTTAGTTAATTTGAA
TTAATGTATAATTATTCGGTGTTTGATATTATATTAATTAGAGTCGATTAAATTTAAATT
CGCATCAGAAAGTTTTTCATAGAAGGGTAAA