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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g049070.1.1
CDS Infomation

extensin-like
Sequence

ATGGGAAGCCAAATAAAGAAGCAATGGCTTCAATTTGCTTGTCTTTTGACATTTTTCTTG
ATTGCCACATGCTCTATGGCATATTCACCTTACAATTCTTATGAATCATCAGACTCAACA
TATAATAAAGTACCAACCACAGTAGTCAAAAGTGAAGACTTCAAGGTACCCTCAGAGTCG
GAAAAGGAATATAAGTCGTCATTTTTGCCAAAAAATGATTACTATAAGAAGCCATCAATT
TCAGAGGATAACTATAAGAAAGTATCATTTGTTCCCGAACATGAATCATTCCTGCCAAAG
AATGACTACTACAAGAAGCCATTATTTTCGGAAGATAACTACAAGAAGGAGTCATATGTT
CAAGAGGTACCCTCGAAGGCTAAACCAGAATATAAGGAGTCATTTTTTTCAAAATTTGAC
TACTTCAAGAAGCCATCATTTTTCGAAGACAACTACAAGAAGACGTCATATGTTCCAAAG
GTACCCTCGATGGCTAAACCAGAATATAAGGAGTCATTTTTTCCAAAATTTGACTACTTT
AAGAAGCCATCAGTTTCAGAAGATAACTACAAGAAGACGTCATATGTTTCAGAGGTGCCC
TCGATGGCTAAACCAGAATATAAGGAGTCATTTTTTCCAAAATTTGACTACTTTAAGAAG
TCATTAGCTCCTGAAGATAAATACAAGAAGGCGCCATATGTTCCAGAGGTATCCACAGAG
CCTAAACCGGAATACAAGGTACCATCTTTGCCAAAGAATGACTACTATAAGAAGCCAACA
ATTCCAGAAGATAACTATAAAAAGGTGTCATATGTTTCAAAGGTGCCCTCAGTGCCTAAA
GAAGAATACAAGGCACCTACTTTGCCAAAGAATGATTACTACAAGAAGCCATCAGTTCAA
GAAGAAAACTACAAAAAGGTACCACTTATTTCAAAGCTGCCCTCAGTGCCTAAAGAAGAA
TACAAGGTGCCTTCTTTGTCAAAAAAAGACTACTACAAGAAGCCATTAGTTTCTGAAGAT
AACTACAAAAAGGTTTCATATGTTCCAAAGGTGCCCTCCGTGCCTAAAGAAGAATACAAG
GCGCCTTCTTTGTCAAAGAATGACTACTACAAGAAGTCATCGCCTTCTCCATCACCACCA
CCACCTCCATATTATTAA

Peptide Sequence

PEP ID

Solyc12g049070.1.1
PEP Infomation

extensin-like
Sequence

MGSQIKKQWLQFACLLTFFLIATCSMAYSPYNSYESSDSTYNKVPTTVVKSEDFKVPSES
EKEYKSSFLPKNDYYKKPSISEDNYKKVSFVPEHESFLPKNDYYKKPLFSEDNYKKESYV
QEVPSKAKPEYKESFFSKFDYFKKPSFFEDNYKKTSYVPKVPSMAKPEYKESFFPKFDYF
KKPSVSEDNYKKTSYVSEVPSMAKPEYKESFFPKFDYFKKSLAPEDKYKKAPYVPEVSTE
PKPEYKVPSLPKNDYYKKPTIPEDNYKKVSYVSKVPSVPKEEYKAPTLPKNDYYKKPSVQ
EENYKKVPLISKLPSVPKEEYKVPSLSKKDYYKKPLVSEDNYKKVSYVPKVPSVPKEEYK
APSLSKNDYYKKSSPSPSPPPPPYY*

Transcript Sequence

Transcript ID

Solyc12g049070.1.1
Transcript Infomation

extensin-like
Sequence

ATGGGAAGCCAAATAAAGAAGCAATGGCTTCAATTTGCTTGTCTTTTGACATTTTTCTTG
ATTGCCACATGCTCTATGGCATATTCACCTTACAATTCTTATGAATCATCAGACTCAACA
TATAATAAAGTACCAACCACAGTAGTCAAAAGTGAAGACTTCAAGGTACCCTCAGAGTCG
GAAAAGGAATATAAGTCGTCATTTTTGCCAAAAAATGATTACTATAAGAAGCCATCAATT
TCAGAGGATAACTATAAGAAAGTATCATTTGTTCCCGAACATGAATCATTCCTGCCAAAG
AATGACTACTACAAGAAGCCATTATTTTCGGAAGATAACTACAAGAAGGAGTCATATGTT
CAAGAGGTACCCTCGAAGGCTAAACCAGAATATAAGGAGTCATTTTTTTCAAAATTTGAC
TACTTCAAGAAGCCATCATTTTTCGAAGACAACTACAAGAAGACGTCATATGTTCCAAAG
GTACCCTCGATGGCTAAACCAGAATATAAGGAGTCATTTTTTCCAAAATTTGACTACTTT
AAGAAGCCATCAGTTTCAGAAGATAACTACAAGAAGACGTCATATGTTTCAGAGGTGCCC
TCGATGGCTAAACCAGAATATAAGGAGTCATTTTTTCCAAAATTTGACTACTTTAAGAAG
TCATTAGCTCCTGAAGATAAATACAAGAAGGCGCCATATGTTCCAGAGGTATCCACAGAG
CCTAAACCGGAATACAAGGTACCATCTTTGCCAAAGAATGACTACTATAAGAAGCCAACA
ATTCCAGAAGATAACTATAAAAAGGTGTCATATGTTTCAAAGGTGCCCTCAGTGCCTAAA
GAAGAATACAAGGCACCTACTTTGCCAAAGAATGATTACTACAAGAAGCCATCAGTTCAA
GAAGAAAACTACAAAAAGGTACCACTTATTTCAAAGCTGCCCTCAGTGCCTAAAGAAGAA
TACAAGGTGCCTTCTTTGTCAAAAAAAGACTACTACAAGAAGCCATTAGTTTCTGAAGAT
AACTACAAAAAGGTTTCATATGTTCCAAAGGTGCCCTCCGTGCCTAAAGAAGAATACAAG
GCGCCTTCTTTGTCAAAGAATGACTACTACAAGAAGTCATCGCCTTCTCCATCACCACCA
CCACCTCCATATTATTAA